For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPERGSPHGVVVGVDGSDCSLAAVRWAAREAHFRHARLAIVHVVTEGGDEEADAVLAEAMAQGRDAAGGG GSEIETRRVHGRPVQALVDLSGTAQMIVVGRRGRTGRRPPGVGSVGAGQLHHAHCPVAIVHDDADQQQPR PVLVGVDGSKPSLAAAAIAFDEASWRGADLLALHVCKDADAPASHDAQTSVLEQDAEDFLTASLADLRQQ YPEVVVHRLVRFGKPARQLLAQAERAQLVVVGSHGRGGFAGKLLGSVSAAVADEARVPVIVARQP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1402 | - | - | 100% (275) | UspA domain-containing protein |
| M. vanbaalenii PYR-1 | Mvan_1963 | - | 6e-57 | 45.48% (299) | UspA domain-containing protein |
| M. vanbaalenii PYR-1 | Mvan_1378 | - | 2e-51 | 44.29% (289) | UspA domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2028c | - | 3e-52 | 42.86% (287) | hypothetical protein Mb2028c |
| M. gilvum PYR-GCK | Mflv_4985 | - | 6e-92 | 62.45% (277) | UspA domain-containing protein |
| M. tuberculosis H37Rv | Rv2005c | - | 3e-52 | 42.86% (287) | hypothetical protein Rv2005c |
| M. leprae Br4923 | MLBr_01390 | - | 2e-06 | 32.64% (144) | hypothetical protein MLBr_01390 |
| M. abscessus ATCC 19977 | MAB_2489 | - | 3e-37 | 38.73% (284) | hypothetical protein MAB_2489 |
| M. marinum M | MMAR_4922 | - | 4e-57 | 43.73% (295) | hypothetical protein MMAR_4922 |
| M. avium 104 | MAV_2507 | - | 1e-52 | 44.01% (284) | universal stress protein family protein |
| M. smegmatis MC2 155 | MSMEG_3936 | - | 5e-55 | 44.98% (289) | universal stress protein family protein |
| M. thermoresistible (build 8) | TH_2494 | - | 1e-58 | 44.15% (299) | PUTATIVE putative conserved hypothetical membrane protein |
| M. ulcerans Agy99 | MUL_5033 | - | 6e-56 | 45.36% (302) | hypothetical protein MUL_5033 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_1402|M.vanbaalenii_PYR-1 --MPERGSPHGVVVGVDGSDCSLAAVRWAAREAHFRHARLAIVHVVT---
Mflv_4985|M.gilvum_PYR-GCK --MTDEAAPYGIVVGADGSPSSLSAVRWAATEAGLRHLRLTVAHVHE---
MMAR_4922|M.marinum_M --MGGEVVDPGIVIGIDGSPGSDAALKWAVQEATMRNVALTVVHAAAYVP
MSMEG_3936|M.smegmatis_MC2_155 MSVADSDLPHGIVVGVDGSSWSRAAVRWAMAEATLRGVDLTIAHVVT--P
Mb2028c|M.bovis_AF2122/97 --MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVN---
Rv2005c|M.tuberculosis_H37Rv --MSKPRKQHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVN---
MAV_2507|M.avium_104 --MAASSKRCGVLVGVDGSPASNFAVCWAARDAAMRNVPLTLVHMVN---
MUL_5033|M.ulcerans_Agy99 --MSTESTSPAIVVGVDGSPASTLAVDWAARDAEMRNVPLKVVHVFAP-M
TH_2494|M.thermoresistible__bu --VSSTAAYEGIVVGVDGSAASADAVRWAARSAALRNLQLTLVHVMTA-T
MAB_2489|M.abscessus_ATCC_1997 --MTTSTPNSHILVGVDGSTSALHALTWAGAEAQRRNLPLTLVHVIDH--
MLBr_01390|M.leprae_Br4923 -----MGAYQTVVVGTDGSDSSLRAVDRAGKIAG----------------
:::* *** : * . *
Mvan_1402|M.vanbaalenii_PYR-1 ------------------EGGDEEADAVLAEAMAQGRDAAGGGGSE----
Mflv_4985|M.gilvum_PYR-GCK ------------------GSGADEADSVLDEATAEARNAAGVDGPD----
MMAR_4922|M.marinum_M DAAPKVEWFGDPAPDELLQQLDTRAQQVLADAVQIVK-DATGDHRLR---
MSMEG_3936|M.smegmatis_MC2_155 LSASTLLWPGGRIPEEVLEVQDNDARTAIADAIKIVQEDVTGTSRPQ---
Mb2028c|M.bovis_AF2122/97 --ADVATWPPMPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLS---
Rv2005c|M.tuberculosis_H37Rv --ADVATWPPMPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLS---
MAV_2507|M.avium_104 --A-ATVWPQVPMAAEAVAWQEDDGRRVLQEAVKIAEDATRNGRNLA---
MUL_5033|M.ulcerans_Agy99 -VAPANGWADVAMPADYARWREDQAHQIVQQAHAVAVDAAAPGRAAH---
TH_2494|M.thermoresistible__bu SIGAPLVWPAGPIPDSLIQWQEDEARQILADSAEIAENAFQEARAAGPGP
MAB_2489|M.abscessus_ATCC_1997 --SSLGQGYNLGASASFFQHLETDGAEFLSQAKDHVYALHPN--------
MLBr_01390|M.leprae_Br4923 ----------------------SDAKLIIASAYLPQHDNARAFDILK---
. : .:
Mvan_1402|M.vanbaalenii_PYR-1 -------IETRRVHGRPVQALVDLSGTAQMIVVGRRGRTGRRPPGVGSVG
Mflv_4985|M.gilvum_PYR-GCK -------VEGRRLTGQPAAELVELSGDAQLVVVGSRGRTGRSP---GSVG
MMAR_4922|M.marinum_M -------IIHELSSQSPVPALVELSRKADLVVVGSRGQGLVKRMLLGSVS
MSMEG_3936|M.smegmatis_MC2_155 -------VRSEMLYGGVVPSLTGFSRSAELIVVGPRGRNEQHRRLLGSVA
Mb2028c|M.bovis_AF2122/97 -------VKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGLLGSVS
Rv2005c|M.tuberculosis_H37Rv -------VKSELVFSTPVPTMVEISNEAEMVVLGSSGRGALARGLLGSVS
MAV_2507|M.avium_104 -------ITTELWHAPPAPTLAQLSEEAELVVVGSTGRGAIGRLLLGSVS
MUL_5033|M.ulcerans_Agy99 -------VTSEVRYAAIVPAMVELSLQAEMVVVGCRGQGGVASALLGSVS
TH_2494|M.thermoresistible__bu AGDDAVRVVTGVVRAAPVPTLVDASKQAKLVAVGSRGQGPLRRVLLGSVS
MAB_2489|M.abscessus_ATCC_1997 -----VEVSTVKATGRPVPVLVELSRNALMTVLGSSGLGGFTGMMAGSVS
MLBr_01390|M.leprae_Br4923 ---------DESYKVTGTAPIYEILHDAKERAHAAGAKNVEERPVVGAPV
. : * . . . *:
Mvan_1402|M.vanbaalenii_PYR-1 AGQLHHAHCPVAIVHDDAD-QQQP--RPVLVGVDGSKPSLAAAAIAFDEA
Mflv_4985|M.gilvum_PYR-GCK LGLLHHARCPVVVVHDDLAPRNRPGRRPVLVGIDGSKTSLHAAAIAFEEA
MMAR_4922|M.marinum_M TGLVHHAHCPVAVVPSEVPP-PVEG--PVVVGIDGSPASELATAIAFDEA
MSMEG_3936|M.smegmatis_MC2_155 SGLLHHARCPVAIVHATGAA-RVSGRSPVLLGTDGSPASEFATEIAFREA
Mb2028c|M.bovis_AF2122/97 SSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEA
Rv2005c|M.tuberculosis_H37Rv SSLVRRAGCPVAVIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEA
MAV_2507|M.avium_104 SGLVRRARCPVAVIHDEDPMMPYPQRAPVLVGIDGSPASELATAIAFDEA
MUL_5033|M.ulcerans_Agy99 SGLAHHAHCPVAIIHDDEPLPPRSAQAPVLVGVDGSPTSELATEIGFDEA
TH_2494|M.thermoresistible__bu SGLVHHAHCPVAVIREGTPHTPDFAKRPVLVGIDGSESAQRATAVAFEEA
MAB_2489|M.abscessus_ATCC_1997 VSLTAKGHSPVVVVR----ESPVPGGGPVVVGIDDSESSDGAAAWAFEEA
MLBr_01390|M.leprae_Br4923 DALVN---------------------------------------------
.
Mvan_1402|M.vanbaalenii_PYR-1 SWRGADLLALHVCKDADAPASH--------DAQTSVLEQDAEDFLTASLA
Mflv_4985|M.gilvum_PYR-GCK SRRSVDLLALHVCKDADTGGPH--------DHRMTILEEEAADFLRETLA
MMAR_4922|M.marinum_M SWRGAELVALHAWTDAEVPAAANRDWTGTTRTSWSELQAAADETLAERLV
MSMEG_3936|M.smegmatis_MC2_155 ALRGVDVVALHVLVDADM--------SGLFAAEWSALQAVVQKPIAERLG
Mb2028c|M.bovis_AF2122/97 SRRGVELIAVHAWSDVEVVELP--------GLDFSAVQQEAELSLAERLA
Rv2005c|M.tuberculosis_H37Rv SRRGVELIAVHAWSDVEVVELP--------GLDFSAVQQEAELSLAERLA
MAV_2507|M.avium_104 LRRGVDLNAVHAWSDTQVFGLP--------GMDWPAVRSQAERSLAERLA
MUL_5033|M.ulcerans_Agy99 SRRGAELVALHAWTDMGPLDFPS---INWAPIEWSNIKDQEEEVLAERLC
TH_2494|M.thermoresistible__bu SFRGVDLIALHAWSDADIADIP--------TLELSAVQQSAERVLSERLA
MAB_2489|M.abscessus_ATCC_1997 AMRETELVAVHVWNNIPPGYVYAY--TAWSAMDSAGEQQRQEQLLAERLA
MLBr_01390|M.leprae_Br4923 --------------------------------------------------
Mvan_1402|M.vanbaalenii_PYR-1 DLRQQYPEVVVHRLVRFGKPARQLLAQAERAQLVVVGSHGRGGFAGKLLG
Mflv_4985|M.gilvum_PYR-GCK DLQQRFPEVVVRPLIRFANPTRQLLVQAERSQLVVVGSHGRGAIAGRLLG
MMAR_4922|M.marinum_M GWRERYPDVVVRRVVVVNRATQHLIEHAESAQLVVVGSHGRGGFSGMLLG
MSMEG_3936|M.smegmatis_MC2_155 AWEERYPETSVNLEIEFDRPADALIAASEGAQLVVLGSRGRGGFTGMLLG
Mb2028c|M.bovis_AF2122/97 GWQERYPDVPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLG
Rv2005c|M.tuberculosis_H37Rv GWQERYPDVPVSRVVVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLG
MAV_2507|M.avium_104 GWQERYPDVTVHRMVVCDRPARQLIEQSESAQLTVVGSHGRGGLAGTLLG
MUL_5033|M.ulcerans_Agy99 GWQERYPDVVTHKVVVSDRPAPRLLEHAHDAQLVVVGSHGRGGFPGMLLG
TH_2494|M.thermoresistible__bu GFRERYPDVSVHRRIVGSEPARHLVEASEDAQLVVVGSRGRGGFTGMLLG
MAB_2489|M.abscessus_ATCC_1997 GWQEKYPDVPVRRVVAVGHPADVLLSQAAGAQLIVTGSRGRGDIAGFFLG
MLBr_01390|M.leprae_Br4923 ------------------------LAEKTNADLLVVGNVGLSTIAGRLLG
: ::* * *. * . :.* :**
Mvan_1402|M.vanbaalenii_PYR-1 SVSAAVADEARVPVIVARQP---
Mflv_4985|M.gilvum_PYR-GCK SVSAAVAEGCRIPVIVARRT---
MMAR_4922|M.marinum_M SVSTAVVHAVRAPVIVARQG---
MSMEG_3936|M.smegmatis_MC2_155 SVSSAVAQEVRVPIIVARPR---
Mb2028c|M.bovis_AF2122/97 SVSNAVLHAARVPVIVARQS---
Rv2005c|M.tuberculosis_H37Rv SVSNAVLHAARVPVIVARQS---
MAV_2507|M.avium_104 SVSNAVVHSVRMPVIVARPS---
MUL_5033|M.ulcerans_Agy99 SVSRAVVNSARIPVIIARTPANS
TH_2494|M.thermoresistible__bu SVSRAVVNAVTTPVIVAR-----
MAB_2489|M.abscessus_ATCC_1997 STSHALIHKASCPVLVAPRT---
MLBr_01390|M.leprae_Br4923 SVPANVSRRAKIDVLIVHTTH--
*.. : :::.