For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TEQGERSACVIDELRGLFLFDGLTDAQLTALCADGWVQTFPAGQLCREGDPARYFYVLLDGEIALSKRSG DRDVDIWRAAEPGVYCGAWSAFLRDPDLTYENSATVTRPSRLLVLDAMTLGDFLVTEFPMASHLLVGHSH GRFHAHRILGPHDRLVALGQLTAGLTHELNNPAAAAVRAAHGLRTQIAAMRHRRAELPENALPPEAMSSL VELQDRVAEAAGKPKDLTSVEKSDLEEALGRWLEARGVDDAWEHAATFAEAGLDIDWMERISASRCCDGP TSLSAVIRWLAGTAETELLLTEITDATKRISTLVDQAKRYSQLDRAPFDVADVHELLDSTLTMFSHRLGD AVTVVRDYDLGLPDLPCYAAELNQVWTHLIANALDALAGQPAGVLTIRTRHEQHMARVEVCDTGGGIPDD LLTRVFDPFFTTKPFGEGTGLGLDIAARIVDRHRGSLWAESTPGDTRFITSLPLTVEPARP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1370 | - | - | 100% (482) | cyclic nucleotide-binding protein |
M. vanbaalenii PYR-1 | Mvan_1369 | - | e-131 | 51.27% (474) | cyclic nucleotide-binding protein |
M. vanbaalenii PYR-1 | Mvan_5174 | - | 6e-12 | 30.05% (193) | integral membrane sensor signal transduction histidine kinase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3790c | - | 2e-11 | 30.89% (191) | putative two component sensor kinase |
M. gilvum PYR-GCK | Mflv_5004 | - | 1e-137 | 53.07% (473) | cyclic nucleotide-binding protein |
M. tuberculosis H37Rv | Rv3764c | - | 2e-11 | 30.89% (191) | two component sensor kinase |
M. leprae Br4923 | MLBr_00774 | mtrB | 7e-07 | 24.17% (211) | putative two-component system sensor kinase |
M. abscessus ATCC 19977 | MAB_3340 | - | 3e-11 | 28.65% (185) | sensor histidine kinase |
M. marinum M | MMAR_5316 | tcrY | 3e-13 | 28.21% (319) | two-component sensor kinase TcrY |
M. avium 104 | MAV_0305 | - | 4e-13 | 28.88% (322) | sensor histidine kinase |
M. smegmatis MC2 155 | MSMEG_1515 | - | 1e-134 | 51.66% (482) | two-component sensor histidine kinase |
M. thermoresistible (build 8) | TH_2175 | - | 7e-08 | 27.08% (192) | two-component sensor protein |
M. ulcerans Agy99 | MUL_1502 | - | 3e-11 | 31.18% (186) | two component regulator - sensor kinase |
CLUSTAL 2.0.9 multiple sequence alignment Mb3790c|M.bovis_AF2122/97 -------------------------------------------MGITAAT Rv3764c|M.tuberculosis_H37Rv -------------------------------------------MGITAAT MAV_0305|M.avium_104 -----------------MADTRRVWSLRLRLLVGQIVVLALVCLGITAVT MMAR_5316|M.marinum_M ------------MSSNRLVRRPGAWSLRLRLLVGQILVLAVVCVGITAAT Mflv_5004|M.gilvum_PYR-GCK --------------------MGEK-----CLPDELRSLFLFEKLTDDQLQ MSMEG_1515|M.smegmatis_MC2_155 --------------------MSEL-----CVRDELRTLFLFEHLTDAQLD Mvan_1370|M.vanbaalenii_PYR-1 --------------------MTEQGERSACVIDELRGLFLFDGLTDAQLT MUL_1502|M.ulcerans_Agy99 ---------MAEELESPGDPETPTPSLQRRVILLVVALLAVLLVVLGVTI MLBr_00774|M.leprae_Br4923 -MIFSSRRRIRGRWGRSGPMMRGMGALTRVVGVVWRRSLQLRVVALTFGL MAB_3340|M.abscessus_ATCC_1997 -------------------------------------------------- TH_2175|M.thermoresistible__bu VTPAATGERRGSRLTVQGWQNLVLSGMGVIVLAGAITGWLLLHRTDDMTR Mb3790c|M.bovis_AF2122/97 EMALRRHLVAQLDNQLGG---TSYRSVLMYPEKMPRPPWRRETHNYIRSG Rv3764c|M.tuberculosis_H37Rv EMALRRHLVAQLDNQLGG---TSYRSVLMYPEKMPRPPWRHETHNYIRSG MAV_0305|M.avium_104 ELALNHHLVKQLDGQLAG---TSFRSALMYPE--PNHP-RHEHSPYPRPG MMAR_5316|M.marinum_M ELALHHHLVAQLDGQLGG---TSHRSALMYPE--SSHRFWRHQHRYWRPG Mflv_5004|M.gilvum_PYR-GCK DLCAHGHIATFEPGPICT---EGDPATCFYVMIDGELVMSKRSGGV---D MSMEG_1515|M.smegmatis_MC2_155 TLCEAGRIEKFPPGPICT---EGEPATCFYVLIDGELVMSKRSGGV---D Mvan_1370|M.vanbaalenii_PYR-1 ALCADGWVQTFPAGQLCR---EGDPARYFYVLLDGEIALSKRSGDR---D MUL_1502|M.ulcerans_Agy99 DVSLGLQARRNLHDLLLA---ATSRADALASVGTSPELIAAEINGG---S MLBr_00774|M.leprae_Br4923 SLAVILALGFVLTSQLTSRVLDVKVRVAIEQIERARTTVTGIVNGEETRS MAB_3340|M.abscessus_ATCC_1997 -------------------------------------------------- TH_2175|M.thermoresistible__bu ELKNDIQPARVAAYQLQSALRDQETAVRSYALTGDEGFLTLYETAQRDER Mb3790c|M.bovis_AF2122/97 PGPRFLDAPGQPAGMVAAVVSD---GTTVAAGYLTGSGSRAALTSTGRSQ Rv3764c|M.tuberculosis_H37Rv PGPRFLDAPGQPAGMVAAVVSD---GTTVAAGYLTGSGSRAALTSTGRSQ MAV_0305|M.avium_104 PGPRFLDAPGQPAGMVAAVVSH---GKTVDAGYLTSSGTRDALTSTAQTQ MMAR_5316|M.marinum_M PGPRFLDAPGQPAGMVGAVVRD---GKAIVAGYLTNSGDRAEISPTAQAQ Mflv_5004|M.gilvum_PYR-GCK LETNRTSQRGVYCGAWSAYVPG---EDKTYQASVRVTRP-SRFFVLDAAA MSMEG_1515|M.smegmatis_MC2_155 IQTNRTSQRGVYFGAWSAYIPG---EEHIYEASVRLTQP-SRIFVLDADT Mvan_1370|M.vanbaalenii_PYR-1 VDIWRAAEPGVYCGAWSAFLRD---PDLTYENSATVTRP-SRLLVLDAMT MUL_1502|M.ulcerans_Agy99 VRALLVTADGATYGDPNISPDT---TAGPAVPALPGPPPLIPPGGHQGPH MLBr_00774|M.leprae_Br4923 LDSSLQLARNTLTSKTDPTSGAGLVGAFDAVLIVPGDGPRTATTAGPVDQ MAB_3340|M.abscessus_ATCC_1997 -----MTRPRYGIGLRLLVVNS------LVVLAGIATTSVVAAIVGPPMF TH_2175|M.thermoresistible__bu AAADYLRALVGDRPEQMSDLAD-IERNAATWRTDYVAPLLSAVRPTAQPE Mb3790c|M.bovis_AF2122/97 LERIAGSRTPLTLDLDGLGRYRVLAAPSRNGHDVIVTGLSMGNVDATMLQ Rv3764c|M.tuberculosis_H37Rv LERIAGSRTPLTLDLDGLGRYRVLAAPSRNGHDVIVTGLSMGNVDATMLQ MAV_0305|M.avium_104 LEQIAGSRAPVTVNLDGLGRYRVVAAPSRNGSDIIVTGLSMANIDATLIR MMAR_5316|M.marinum_M LAAVAGSQDPVTLNLDGLGRYRVVSALSRRGDELIVTGLSMSDVDATMIR Mflv_5004|M.gilvum_PYR-GCK FATFMQREFPMAVHL--LEGHMVGGVRQRQIIDTREKLLALGQLSAGLTH MSMEG_1515|M.smegmatis_MC2_155 FAVFMQSQFPMAVHL--LEGHKVGGRRQSQIIGQREKLLALGTITAGLTH Mvan_1370|M.vanbaalenii_PYR-1 LGDFLVTEFPMASHL--LVGHSHGRFHAHRILGPHDRLVALGQLTAGLTH MUL_1502|M.ulcerans_Agy99 GPPPPPPPPPGGPPPGPPPDATATAAVHTLPDGSRLILVADTTQTTQVTR MLBr_00774|M.leprae_Br4923 VPNSLRGFIKAGQAAYQYATVHTEGFSGPALIIGTPTSSQVTNLELYLIF MAB_3340|M.abscessus_ATCC_1997 RRLMDQQVSPGAGNDHPYERAFRDATAMSIGFAVAVSALAALTLSWYLSH TH_2175|M.thermoresistible__bu LTALVEGERVEFDRMRALFDVQNSHLTETRQAAVDELERTRGWRNAVLIA : Mb3790c|M.bovis_AF2122/97 MLIIFGIVT-VIALVAATTAGIVIIKRALAPLRRVAQTASEVVDLPLDRG Rv3764c|M.tuberculosis_H37Rv MLIIFGIVT-VIALVAATTAGIVIIKRALAPLRRVAQTASEVVDLPLDRG MAV_0305|M.avium_104 MLVIFGIVT-VIALAAATIAGVVIIRRALAPLRRVAQTAREVADLPLARG MMAR_5316|M.marinum_M MLIIFGIVT-IVALVAATTAGAIIIRRALAPLRRVAQTATEVVDLPLDRG Mflv_5004|M.gilvum_PYR-GCK QLNNPAGAT-ARAVADLREG-VGKMRHKLAMLADGKFTPEALRVLVSIQD MSMEG_1515|M.smegmatis_MC2_155 QLNNPAAAT-ARAVADLREG-VGKMRHKLAMLADGKFSAETLRVLVTIQD Mvan_1370|M.vanbaalenii_PYR-1 ELNNPAAAA-VRAAHGLRTQ-IAAMRHRRAELPENALPPEAMSSLVELQD MUL_1502|M.ulcerans_Agy99 QLRQLMIGAGLVTLVVAALLLVLVSRAALAPLDRLAALAKDITTG--DRG MLBr_00774|M.leprae_Br4923 PLKNEQATVTLVRGTMATGGMVLLVLLSGIALLVSRQVVVPVRSASRIAE MAB_3340|M.abscessus_ATCC_1997 RVHRSATALSQAASAVADGN------------------------------ TH_2175|M.thermoresistible__bu MVTAFFVTAALLAVLVRATITRPLEELAAACRRITEGDFGERISLRGPRD : Mb3790c|M.bovis_AF2122/97 EVKLPVRVPEPDANPSTEV---GQLGSALNRMLDHIAAALSARQASETRV Rv3764c|M.tuberculosis_H37Rv EVKLPVRVPEPDANPSTEV---GQLGSALNRMLDHIAAALSARQASETCV MAV_0305|M.avium_104 EVELPVRVRESDANPSTEV---GQLGAALNRMLDHIADALSARQASETRV MMAR_5316|M.marinum_M EVELPVRVSETDANPDTEV---GQLGSALNRMLDHIAAALSTRQASETRV Mflv_5004|M.gilvum_PYR-GCK EVAEQVAKSKAQELTAIET---SDREDQIGDWLEAHGISAAWDYAPTFVD MSMEG_1515|M.smegmatis_MC2_155 EVAEQVAKNKSVELTALEA---SDREDQIGDWLEDHNIPMAWEYAPTFVE Mvan_1370|M.vanbaalenii_PYR-1 RVAEAAGKPK--DLTSVEK---SDLEEALGRWLEARGVDDAWEHAATFAE MUL_1502|M.ulcerans_Agy99 RRLRPSRGDTELGRAASAF---DGMLDALEDSELRAQQAATAAQRAENAT MLBr_00774|M.leprae_Br4923 RFAEGHLSERMPVRGEDDM---ARLAVSFNDMAESLSRQITQLEEFGNLQ MAB_3340|M.abscessus_ATCC_1997 -----YDIRVPPPRLGKEF---DAVAAAFNKMAQRLG-------AVDEAR TH_2175|M.thermoresistible__bu LRSIATDVDDMRQRIVDELRTSHRAHAKLSEQTEALDEQAAELRRSNAEL : Mb3790c|M.bovis_AF2122/97 RQFVADASHELRTPLAAIR----GYTELTQRIG--DDPEAVAHAMSRVAS Rv3764c|M.tuberculosis_H37Rv RQFVADASHELRTPLAAIR----GYTELTQRIG--DDPEAVAHAMSRVAS MAV_0305|M.avium_104 RQFVADASHELRTPLAAIR----GYTELTQRMG--DDREAVAQAMSRVAS MMAR_5316|M.marinum_M RQFVADASHELRTPLAAIR----GYTELAQRMG--DDRAAVAHAMSRVGS Mflv_5004|M.gilvum_PYR-GCK AGLDVDWLERVEASIDDVD----CSATLPGAIGWLKYTIDNELLMNQIAE MSMEG_1515|M.smegmatis_MC2_155 AGLDIDWLERISASIEDVHDETCGAKTLQSALGWLKYTIDTELRMNEIGE Mvan_1370|M.vanbaalenii_PYR-1 AGLDIDWMERISASRCCDG-----PTSLSAVIRWLAGTAETELLLTEITD MUL_1502|M.ulcerans_Agy99 RQFLVDAAHELRTPIAGMQVAAEQLASSAGQQQEDPAARGQYRRASLLLS MLBr_00774|M.leprae_Br4923 RRFTSDVSHELRTPLTTVR-----MAADLIYDHSSDLDPTLRRSTELMVS MAB_3340|M.abscessus_ATCC_1997 RQMLADLAHEIRTPVAVLE--------AYMEAVEDGVQQLDQQTVATLRD TH_2175|M.thermoresistible__bu EQFAYVASHDLQEPLRKVAS----FCQLLEKRYGDQLDERGVEYIRFAVD : . : . . Mb3790c|M.bovis_AF2122/97 ETERITRLVEDLLLLARLDSGR-PLERGPVDMSRLAVDAVSDA-HVAGPD Rv3764c|M.tuberculosis_H37Rv ETERITRLVEDLLLLARLDSGR-PLERGPVDMSRLAVDAVSDA-HVAGPD MAV_0305|M.avium_104 ETERMTRLVEDLLLLARLDSGR-PLEREPVDLSRLAVDAVNDA-HVAGPD MMAR_5316|M.marinum_M ETERITSLVEDLLLLARLDSGR-PLEREPVDMSRLAVDAVSDA-HVAGPD Mflv_5004|M.gilvum_PYR-GCK ASKRISALLAGAKQYSQMDRAE-YQQVNVHELLFSTVKTIFGD-KLGKDK MSMEG_1515|M.smegmatis_MC2_155 ASRRISALLAGAKQYSQMDRGA-YQSADVHELLRSTL-MMFGG-KIGKDK Mvan_1370|M.vanbaalenii_PYR-1 ATKRISTLVDQAKRYSQLDRAP-FDVADVHELLDSTL-TMFSH-RLG--D MUL_1502|M.ulcerans_Agy99 DARRAGRLVADMLDLSRIDAGL-PLDRHDTDLAEIVDAESQRT-TMLAPQ MLBr_00774|M.leprae_Br4923 ELDRFETLLNDLLEISRHDAGVAELSVEAVDLRVMVNNALGNVGHLAEEA MAB_3340|M.abscessus_ATCC_1997 QTRRLTRFSIDVNALSVAESRTTSIDARSVSPADLVTTAVAAFAPRYQTK TH_2175|M.thermoresistible__bu GAKRMQVLINDLLTFSRVGRLN--ATEAAVSLDAALNTALDNLSTAIEES * : : . Mb3790c|M.bovis_AF2122/97 -HQWALDLPPEPVVIPGDAARLHQVVTNLLANARVHTGPG---TIVTTRL Rv3764c|M.tuberculosis_H37Rv -HQWALDLPPEPVVIPGDAARLHQVVTNLLANARVHTGPG---TIVTTRL MAV_0305|M.avium_104 -HQWELDLPEEPVVITGDAARLHQVLTNLLANARVHTGAG---TVVTTRL MMAR_5316|M.marinum_M -QQWELDLPAEPVVVTGDAARLHQVVANLLANARIHTGPG---AVVTTRL Mflv_5004|M.gilvum_PYR-GCK -INLVWDKDKTLPELLCYPGDLNQVWTNIIDNAIQAMDGQ--GTLTIRTM MSMEG_1515|M.smegmatis_MC2_155 PITLVKEMDKTLPELQCYPGDLNQVWTNIIDNAIQAMDGH--GTLTIRTA Mvan_1370|M.vanbaalenii_PYR-1 AVTVVRDYDLGLPDLPCYAAELNQVWTHLIANALDALAGQPAGVLTIRTR MUL_1502|M.ulcerans_Agy99 ITVTRSGLG--TLTVAADPTRVAQILSNLLDNARRYTPAG---GAIAIDL MLBr_00774|M.leprae_Br4923 GIELLVDMPVDEVIAEVDARRVERILRNLIANAIDHSEHK----PVRIRM MAB_3340|M.abscessus_ATCC_1997 GVILTSHADDGLPDVWADPERMGQVLSNLLDNALRHTGPG---GQVTVTA TH_2175|M.thermoresistible__bu GTEIVRPAG--LPTVVGDPTLMAMLWQNLIGNAVKFTRPRQRPRIVIDCR . : : ::: ** Mb3790c|M.bovis_AF2122/97 S------------TGPTHVVLQVIDNGPGIPAALQSEVFERFARGDTSRS Rv3764c|M.tuberculosis_H37Rv S------------TGPTHVVLQVIDNGPGIPAALQSEVFERFARGDTSRS MAV_0305|M.avium_104 S------------TEPAHTVLQVIDNGPGIPAELQSEVFERFARGDSSRS MMAR_5316|M.marinum_M S------------SGPTHVVLEVIDNGPGIPEAMQSEIFERFARGDTSRS Mflv_5004|M.gilvum_PYR-GCK R------------ENEDLIRVEICDDGPGIPDDIIDRIFTPFFTTKP--- MSMEG_1515|M.smegmatis_MC2_155 R------------ENDEMIRVEICDDGPGIPEDIINRIFTPFFTTKP--- Mvan_1370|M.vanbaalenii_PYR-1 H------------EQH-MARVEVCDTGGGIPDDLLTRVFDPFFTTKP--- MUL_1502|M.ulcerans_Agy99 R------------AGQGVATVTVTDTGPGIPDDERNRIFERLVRLDAART MLBr_00774|M.leprae_Br4923 A------------ADEDTVAVTVRDYGIGLRPGEEKLVFSRFWRSDPSRV MAB_3340|M.abscessus_ATCC_1997 T------------ATGTGATIAVADTGDGVPAEHLDRLFDRFYRADAARD TH_2175|M.thermoresistible__bu RRGAGEQGDDANHGDGDEWLISVSDNGIGIADEFVDKVFVIFQRLHGRD- : : * * *: :* : . Mb3790c|M.bovis_AF2122/97 RQAGSTGLGLAIVSA-VVKAHNGTITVS-SSPG-YTEFAVRLPLDGWQPL Rv3764c|M.tuberculosis_H37Rv RQAGSTGLGLAIVSA-VVKAHNGTITVS-SSPG-YTEFAVRLPLDGWQPL MAV_0305|M.avium_104 RKGGSTGLGLAIVSA-VVKAHNGTISVN-SSPG-HTEFTVRLPPNGWQPH MMAR_5316|M.marinum_M RKGGSTGLGLAIVAA-VVKAHNGTITVN-SSPG-RTEFVVRLPLDAWQRS Mflv_5004|M.gilvum_PYR-GCK -FGEGTGLGLDLAWRIVVEKHKGNLTVQ-SQPG-DTRFVICLPLAAPAPT MSMEG_1515|M.smegmatis_MC2_155 -FGEGTGLGLDLAWRIVVEKHNGDLRVY-SEPG-NTRFVVLLPLQAPPPD Mvan_1370|M.vanbaalenii_PYR-1 -FGEGTGLGLDIAAR-IVDRHRGSLWAE-STPG-DTRFITSLPLTVEPAR MUL_1502|M.ulcerans_Agy99 RDHGGAGLGLPIARA-LARAHGGELVCL-PHQG-GARFRLTLPLAVAGGV MLBr_00774|M.leprae_Br4923 RRSGGTGLGLAISIE-DARLHQGRLEAW-GEPGQGACFRLTLPLVRGHKV MAB_3340|M.abscessus_ATCC_1997 RQHGGAGIGLSIAKA-LVEAHEGRIEAHSAGHAAGTTFTVSLPRPSDHPE TH_2175|M.thermoresistible__bu -SYTGTGIGLALCKK-IVEHHGGTIWID-TGYADGARFCFTLPVTSTETA .:*:** : . * * : . : * ** Mb3790c|M.bovis_AF2122/97 ESSPR---------------------------------- Rv3764c|M.tuberculosis_H37Rv ESSPR---------------------------------- MAV_0305|M.avium_104 ASA------------------------------------ MMAR_5316|M.marinum_M GVPPG---------------------------------- Mflv_5004|M.gilvum_PYR-GCK GPSNE---------------------------------- MSMEG_1515|M.smegmatis_MC2_155 GDSSN---------------------------------- Mvan_1370|M.vanbaalenii_PYR-1 P-------------------------------------- MUL_1502|M.ulcerans_Agy99 E-------------------------------------- MLBr_00774|M.leprae_Br4923 TTSPLPMKPILQPSPQASTAGQQHGTQRQRLREHAERSR MAB_3340|M.abscessus_ATCC_1997 KAPGQRPG------------------------------- TH_2175|M.thermoresistible__bu SAVLEGDQE------------------------------