For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TVQDVDPDTFYAVGKGLFEKAGKLYDAFNVNVAILGDTAAMAGTDDTGTAWAASYDQRVGEILAAVNDLT RAMDNYGGVVIQAGYNHAVAEHNATLGNTEPAPVKPPEPVSAAGVLTAPPSAGGPGSGLLDNVGLMQQVG VPVPDGDTAKVSKAGEAWDRLATVYQTTTVAEGLGVDARAFRETRSPEVEYIVSDLDELRQATSAVLDGC AELAQSCRDYKAALDDLRSTLERILEDLAVELAATVAIGVAASFVSFGAGAVAATAKAAHSVTKFARIIA EAIGAWRISKNISKGVKSAHDIAGVRTKLQRIKNLGRKNKPEEKPPAPTPPPPPGVPAGWTARPADNGMG TVYQQPGSLGNSNSMRIMEPGADPRYPNGYVKFTNEHNQPINLDGKPGTRADTHIPRNPDGTYPIPKGWP *
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1118 | - | - | 100% (421) | hypothetical protein Mvan_1118 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3933c | - | 2e-17 | 27.47% (233) | hypothetical protein Mb3933c |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv3903c | - | 2e-17 | 27.47% (233) | hypothetical protein Rv3903c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3114 | - | 3e-20 | 28.99% (276) | hypothetical protein MAB_3114 |
M. marinum M | MMAR_5464 | - | 7e-10 | 23.40% (235) | ADP-ribosyltransferse |
M. avium 104 | MAV_4644 | - | 1e-16 | 28.14% (231) | hypothetical protein MAV_4644 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2318 | - | 3e-07 | 24.00% (225) | hypothetical protein MUL_2318 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3933c|M.bovis_AF2122/97 ------MAPLAVDPAALDSAGGAVVAAGAGLGAVISSLTAALAGCA-GMA Rv3903c|M.tuberculosis_H37Rv ------MAPLAVDPAALDSAGGAVVAAGAGLGAVISSLTAALAGCA-GMA MMAR_5464|M.marinum_M ------MAPLAVDPAALDGAGAAVVAAGEGLEPVIASLSAVLAGCA-GMA MAV_4644|M.avium_104 ------MAPLACDPTALDHAGATVVAAGESLGSVISTLTAALAGTS-GMA MUL_2318|M.ulcerans_Agy99 MGKNPGVAPLSVDPEALSGAGSAVAAAGDALAAALSSLTTGFS----ANT Mvan_1118|M.vanbaalenii_PYR-1 ------MTVQDVDPDTFYAVGKGLFEKAGKLYDAFNVNVAILGDTA-AMA MAB_3114|M.abscessus_ATCC_1997 -------MPVVVESAAYYAAANTCYKLSTDVQAAFKPLSRVLTLETSGMA :. : .. . : .: : . : Mb3933c|M.bovis_AF2122/97 GDDPAGAVFGRSYDGSAAALVQAMSVARNGLCNLGDGVRMSAHNYSLAEA Rv3903c|M.tuberculosis_H37Rv GDDPAGAVFGRSYDGSAAALVQAMSVARNGLCNLGDGVRMSAHNYSLAEA MMAR_5464|M.marinum_M GDDPVGAAVGRGYDRAAAKVFSAMAATRNGLCSIGDGVRMSAHNYSLAEA MAV_4644|M.avium_104 GDDPVGAALGRRYDGAAAKLIQAMADTRNGLCSIGDGVRMSAHNYAVAEA MUL_2318|M.ulcerans_Agy99 GQDTAGEVFGLAYQDAAESLVKAAGAGINALRHNGAKIQLSASNYSAAEA Mvan_1118|M.vanbaalenii_PYR-1 GTDDTGTAWAASYDQRVGEILAAVNDLTRAMDNYGGVVIQAGYNHAVAEH MAB_3114|M.abscessus_ATCC_1997 GGYQAVKAWSSGYDNRAAALTTATTEYARALQRLGDILTAAGYNWAIADW * . . . *: . : * ..: * : :. * : *: Mb3933c|M.bovis_AF2122/97 MSDVAG-RAAPLPAPPPSGCVGVGAPPSAVGGGGGAPKG----------- Rv3903c|M.tuberculosis_H37Rv MSDVAG-RAAPLPAPPPSGCVGVGAPPSAVGGGGGAPKG----------- MMAR_5464|M.marinum_M MSDVTR-RAAALPAPTLTTCIVAASAPSAVGTADSAPAG----------- MAV_4644|M.avium_104 MSDLAG-RASALPAPQVTGPLTVGAPPSAVGHGSGAPAG----------- MUL_2318|M.ulcerans_Agy99 ASTLGG-GAGVLPAPSEPAQFTAPGAPGTLGSGVLAPAL----------- Mvan_1118|M.vanbaalenii_PYR-1 NATLGNTEPAPVKPPEPVSAAGVLTAPPSAGGPGSGLLD----------- MAB_3114|M.abscessus_ATCC_1997 RANRDPNKGTGPACPRTIPSELPYGADVVVGVASSKHNGPGLESDVPDLY : * . * Mb3933c|M.bovis_AF2122/97 WGWVAPYIGMIWPNGDSTKLRAAAVAWRSAGTQFALTEIQSTAGPMGVIR Rv3903c|M.tuberculosis_H37Rv WGWVAPYIGMIWPNGDSTKLRAAAVAWRSAGTQFALTEIQSTAGPMGVIR MMAR_5464|M.marinum_M WGWIAPYIGMIWPTGNLSKLRTAASEWTAEGTKFALVETQLTAGPLGAIR MAV_4644|M.avium_104 WGWVAPSIGMIWPTGDSAKLRAAAAAWATAGANFMAAETAAGGGTMAAIG MUL_2318|M.ulcerans_Agy99 WSVVEAFVGDLWPNGDVAGLHAAAGHWRDFAAALNGVQGALNS-PKSVVA Mvan_1118|M.vanbaalenii_PYR-1 NVGLMQQVGVPVPDGDTAKVSKAGEAWDRLATVYQTTTVAEGLGVDARAF MAB_3114|M.abscessus_ATCC_1997 KKVVAQVAGGEIPDGDTNKLDSAAKAWKTFADNDAISRGESDLRLAASAL : * * *: : *. * . . Mb3933c|M.bovis_AF2122/97 AQQ-LPEAGLIESAFADAYASTTAVVGQCHQLAAQLDAYAARIDAVHAAV Rv3903c|M.tuberculosis_H37Rv AQQ-LPEAGLIESAFADAYASTTAVVGQCHQLAAQLDAYAARIDAVHAAV MMAR_5464|M.marinum_M SQQ-LPESGLIERAFTDAYVSTTSVVGQCQTIAAQLDRYADQIDEVHAAI MAV_4644|M.avium_104 AQQ-IPEGAAINKALADASSATADVARQCQTIAAQLNSYAAKVDQVHAAI MUL_2318|M.ulcerans_Agy99 GQD-IPEGVQIQQVLSAIGSDLAGVGAQCRKLAGALDDFADEVADTQDAI Mvan_1118|M.vanbaalenii_PYR-1 RETRSPEVEYIVSDLDELRQATSAVLDGCAELAQSCRDYKAALDDLRSTL MAB_3114|M.abscessus_ATCC_1997 SNFHAPDIPNLSEHLTTLSTSAGRIKLAASDLATSTTAHYAALSQLRSDM : *: : : : . :* . : : : Mb3933c|M.bovis_AF2122/97 LDLLARICDPLTGIKEVWEFLTDQDEDEIQRIAHDIAVVVDQFSGEVDAL Rv3903c|M.tuberculosis_H37Rv LDLLARICDPLTGIKEVWEFLTDQDEDEIQRIAHDIAVVVDQFSGEVDAL MMAR_5464|M.marinum_M LDLLARICDPLTGIKEVWEVLTGEDEDEIERIAHEIAAVVDHFAAEANAL MAV_4644|M.avium_104 LDLLSRICDPLTGIKEVWDLLTDEDEDEIKKIADDIRTVVDNFGREADTL MUL_2318|M.ulcerans_Agy99 RDLLDRFGSVSGLWNQVVAIFEGDALDEIKEIAEDIRAVLSNLGRQARAQ Mvan_1118|M.vanbaalenii_PYR-1 ERILEDLAVELAAT-----------------VAIGVAASFVSFGAGAVAA MAB_3114|M.abscessus_ATCC_1997 QFAIATTLG--------------------VGLAAIAAIAVITRGRATAGG : :* . . . Mb3933c|M.bovis_AF2122/97 AAEITAVVSHAEAVITAMADHAGKQWDRFL---HSNPVGVVIDGTGQQLK Rv3903c|M.tuberculosis_H37Rv AAEITAVVSHAEAVITAMADHAGKQWDRFL---HSNPVGVVIDGTGQQLK MMAR_5464|M.marinum_M SAQFNAALVHADTVLDTMARHAAREWDQFL---HGNPVGAIVDFAGQRLK MAV_4644|M.avium_104 GGQIEATVSAVAAATENMSHWAGKEWDHFL---HGTPVGRALNQVGQAFK MUL_2318|M.ulcerans_Agy99 QQLMQQGMQAIDGLVVGMQRYVRGQLTQLLGQDVGNPVATVFDTYTNTQE Mvan_1118|M.vanbaalenii_PYR-1 TAKAAHSVTKFA-------------------------------------- MAB_3114|M.abscessus_ATCC_1997 AEIAATAVDACASSLAAC-------------------------------- : Mb3933c|M.bovis_AF2122/97 GFGEEAFGMAKDSWDLGPLRASIDPFGWYRSWEEMLTGMAPLAGLGGENA Rv3903c|M.tuberculosis_H37Rv GFGEEAFGMAKDSWDLGPLRASIDPFGWYRSWEEMLTGMAPLAGLGGENA MMAR_5464|M.marinum_M GLGEAAWGLAETALTYNQIRALLDPLGYARDVGSMAQGMAPLVGLGDDHA MAV_4644|M.avium_104 GVGEEGWGFLKGLYEVSPNRMLLDPVGYGKTMAGMVEGAGTLVGLGPDGV MUL_2318|M.ulcerans_Agy99 GVFKAAVGMVEGIEQLNPQRFLIDPQGAAETWKAMTKTGLINHLLNPE-- Mvan_1118|M.vanbaalenii_PYR-1 -------------------RIIAEAIGAWRISKNISKG------------ MAB_3114|M.abscessus_ATCC_1997 ------------------IRPFLTTLGGITFNAEAVTAAG---------- * . * Mb3933c|M.bovis_AF2122/97 PGVVESWKQFGKSLIHWDEWTTN-PNEALGKTVFDAATLALPGGPLSKLG Rv3903c|M.tuberculosis_H37Rv PGVVESWKQFGKSLIHWDEWTTN-PNEALGKTVFDAATLALPGGPLSKLG MMAR_5464|M.marinum_M PSVLESWKQLGKEVTHWDDWSRS-PGEALGKSEFDLANLFLPGGPISKAA MAV_4644|M.avium_104 PGAFDAWKALGKDVTHWDEWGSN-PAEALGKSTFDVATLALPGGPLSKLG MUL_2318|M.ulcerans_Agy99 -EAVAADKEMVKGLLHLEDWRRDRPGLGFGGNLFDVATLFVPGAGGAGAG Mvan_1118|M.vanbaalenii_PYR-1 -----------------------------VKSAHDIAGVRTKLQRIKNLG MAB_3114|M.abscessus_ATCC_1997 -----------------------------LGAIIGLSIATITGETVVYSN . : Mb3933c|M.bovis_AF2122/97 SKGRDILAGVRGLKERLEPTTPHLEPPATPP-----------------RP Rv3903c|M.tuberculosis_H37Rv SKGRDILAGVRGLKERLEPTTPHLEPPATPP-----------------RP MMAR_5464|M.marinum_M SKGRDLADGLQGLKARLRPNEMGEPNPLKRPDAS--------------AA MAV_4644|M.avium_104 KFGHSAADALKGLKK---PPGVPKPPEVKPP-----------------AA MUL_2318|M.ulcerans_Agy99 AKGAAGAARAAEVGGEAADAAAAAGRGGRLAGEVGDLAGAGRTLGDIGKT Mvan_1118|M.vanbaalenii_PYR-1 RKNK---------------------------------------------- MAB_3114|M.abscessus_ATCC_1997 -------------------------------------------------- Mb3933c|M.bovis_AF2122/97 GPQPPRIEPPESGHP-APAPAAKPAPVPANGP-LPHSPTESKPPPVDRP- Rv3903c|M.tuberculosis_H37Rv GPQPPRIEPPESGHP-APAPAAKPAPVPANGP-LPHSPTESKPPPVDRP- MMAR_5464|M.marinum_M EHTPPSTMPQQEAKQPAAAPQPKPLR-PSDGHGLPHSPTESKAPPVDKPA MAV_4644|M.avium_104 PKAPDSGQPAPSGKPGPVAPSGKPAPGPADGP-LPHSPTESKPPAGGTPP MUL_2318|M.ulcerans_Agy99 GRGLTEDLANLGGDLPKADPPVGGRPVALPPPKPAGAPIEPTPRPVESVP Mvan_1118|M.vanbaalenii_PYR-1 -------------------------------------PEEKPPAPTPPPP MAB_3114|M.abscessus_ATCC_1997 -----------------------------------YKPPGDAFDKTGAKS * Mb3933c|M.bovis_AF2122/97 -AEPVAPSSASAGQPRVSAATTPGTHVPHGLPQPGEHVPAQAPPATTLLG Rv3903c|M.tuberculosis_H37Rv -AEPVAPSSASAGQPRVSAATTPGTHVPHGLPQPGEHVPAQAPPATTLLG MMAR_5464|M.marinum_M TGEPVKP-AGAQLGEAR--APGAAARGEKELPAQAEHS-EQINTPVSAPG MAV_4644|M.avium_104 AAEPPKPTAAPHSGEPKPIATPPESVGKPVTPAPAEGAPAQPHEPVSARV MUL_2318|M.ulcerans_Agy99 PGKPALEAPSGAPGSVVPGRSEPAFGPHDPASAPVAGSHPAATAVTPGER Mvan_1118|M.vanbaalenii_PYR-1 PGVPAGWTARPADNGMGTVYQQPGSLGN----SNSMRIMEPGADPRYPNG MAB_3114|M.abscessus_ATCC_1997 PGYPGDYPAGSLPREFVPPKDGPKWVPNPNPKGNRFGWLDADGNVWVPTG . * . . Mb3933c|M.bovis_AF2122/97 GPPVESAPATAHQPQWATTPAAPAAAPHSTPGGVHSTESGPHGRSLSAHG Rv3903c|M.tuberculosis_H37Rv GPPVESAPATAHQPQWATTPAAPAAAPHSTPGGVHSTESGPHGRSLSAHG MMAR_5464|M.marinum_M P--VDGSDLDPTPARPHTSRAAPASAMP----HLAGSRSTPSDVCG---- MAV_4644|M.avium_104 PPTVPAADTPAPSAPAASMSAASGPPMPPTP-SLPEPASLPSGPSGDLPA MUL_2318|M.ulcerans_Agy99 LSPVTPHVGEPARAPGVPVGAAAGPVPAGAHSAPAAIPAAPGAHVMTGAG Mvan_1118|M.vanbaalenii_PYR-1 YVKFTNEHNQPINLDGKPGTRADTHIPRNPDGTYPIPKGWP--------- MAB_3114|M.abscessus_ATCC_1997 KGGLAHGGPHWDVQDPKTGKHENVPPPLPEGEGK---------------- . . Mb3933c|M.bovis_AF2122/97 SEPTHDGASHGSGHGSGSEPPGLHAPHREQQLAMHSNEPAGEGWHRLSDE Rv3903c|M.tuberculosis_H37Rv SEPTHDGASHGSGHGSGSEPPGLHAPHREQQLAMHSNEPAGEGWHRLSDE MMAR_5464|M.marinum_M -----PNVVS-----EGGSPGGHSTPAALDEV-------GGAPGASAPGE MAV_4644|M.avium_104 ETPPTAGIPH-----SGEPSAPSSVPPHFPDTPTHGLGDGGAHGPPESDP MUL_2318|M.ulcerans_Agy99 RPAELSAPHGGVPHGLGDAGPSGGHPHGLPPHGGGPHGPGDASHGARHAE Mvan_1118|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3114|M.abscessus_ATCC_1997 -------------------------------------------------- Mb3933c|M.bovis_AF2122/97 AVDPQYGEPLSRHWDFTDNPADRSRINPVVAQLMEDPNAPFGRDPQGQPY Rv3903c|M.tuberculosis_H37Rv AVDPQYGEPLSRHWDFTDNPADRSRINPVVAQLMEDPNAPFGRDPQGQPY MMAR_5464|M.marinum_M YHGTGGGPGDHGTADGGQSLIIVDGLHADDLSALADYTGSGYLDLNNALR MAV_4644|M.avium_104 KNANGHGPHDASLDSGSDHHLPLHPLDSDDLAALAHYTGPGYQELNFALR MUL_2318|M.ulcerans_Agy99 PPRDGTAHGTADGGDAHGDDVSGHGLSAEKRDEIIAMRKGSRPDPSEYLS Mvan_1118|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3114|M.abscessus_ATCC_1997 -------------------------------------------------- Mb3933c|M.bovis_AF2122/97 TQERYQERFNSVGPWGQQYSNFPPNNGAVP-GTRIAYTNLEKFLSDYGPQ Rv3903c|M.tuberculosis_H37Rv TQERYQERFNSVGPWGQQYSNFPPNNGAVP-GTRIAYTNLEKFLSDYGPQ MMAR_5464|M.marinum_M SDILDASLNARVAALNSALQKLPTYDGTVVRGTDLPPEVVAQYLPGEVIT MAV_4644|M.avium_104 EGALDVSQQARVDALQKALEKLPVYEGAVVRGTNLPADVLEQYRPGEVIT MUL_2318|M.ulcerans_Agy99 PEYIQGHLDRFTGGATRFMPESNLDKYGIAQRDGTSFVMPKSEADAMIAG Mvan_1118|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3114|M.abscessus_ATCC_1997 -------------------------------------------------- Mb3933c|M.bovis_AF2122/97 LDRIGGDQGKYLAIMEHGRPASWEQRALHVTSLRDPYHAYTIDWLPEGWF Rv3903c|M.tuberculosis_H37Rv LDRIGGDQGKYLAIMEHGRPASWEQRALHVTSLRDPYHAYTIDWLPEGWF MMAR_5464|M.marinum_M EVAFLSTTTDPAVAQSPTFAGNVEFRIVSRTGR----DVSSVSMFPD--- MAV_4644|M.avium_104 EAAFTSTSTDHTVAQSSAFAGNTEFRIWSTTGR----DVSSVSMYPD--- MUL_2318|M.ulcerans_Agy99 TGGDLRLMEEELGLPEGFLDSNQIVRIDIEDPR------QFNLRIPSGNE Mvan_1118|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3114|M.abscessus_ATCC_1997 -------------------------------------------------- Mb3933c|M.bovis_AF2122/97 IEVSEVAPGCGQPGGSIQVRIFDH---QNEMRKVEELIRRGVLRQ Rv3903c|M.tuberculosis_H37Rv IEVSEVAPGCGQPGGSIQVRIFDH---QNEMRKVEELIRRGVLRQ MMAR_5464|M.marinum_M --EREILFPAG-TKFYVIDKTLDA---LTG-RTIIDMIER----- MAV_4644|M.avium_104 --EKEILFPAG-SKFYVVSKTVDP---QTG-RTIIEMIER----- MUL_2318|M.ulcerans_Agy99 AGANEQWIPGGLLPTGASEAVVDGGKVPQGDYTVTDVFEEK---- Mvan_1118|M.vanbaalenii_PYR-1 --------------------------------------------- MAB_3114|M.abscessus_ATCC_1997 ---------------------------------------------