For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GLEDRESMRILRDALDLDLGSEALIGDFHTRWFAADLSARDLFPPDLEKQRQVFAQALCWLCDELIAQRA EEPVAFLAQLGRDHRKYGVTQSHYATLQDALLTTLRKALVEQWDRRLAEAVDDVVQLVVGVMSGAADAET SPPFCDGTVLEHLRPARDISVIRLKMDHALAYHPGQYVPVQVPQWPRRWRYLSPAIPADPQGYLEFHIRS VAGGMVSTAIVGEARPGDRWRVSNPHGAMEIDRDGGDVLMVAGSTGLAPLRTLIMDLARFSQNPRVHLFF GAKYPCELYDLRTLWEIASTNPWLSVTPVSELNFDPPWAADYPDVTPPRGLHVRQLGLLPEVVTRYGNWS DRQILLSGRPAMVQATKAALITKGAPAERIQHDPLAN*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0639 | - | - | 100% (388) | oxidoreductase FAD-binding subunit |
| M. vanbaalenii PYR-1 | Mvan_4003 | - | 3e-12 | 27.80% (223) | oxidoreductase FAD-binding subunit |
| M. vanbaalenii PYR-1 | Mvan_1767 | - | 2e-06 | 26.12% (134) | ferredoxin |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0392 | - | 1e-153 | 67.01% (391) | hypothetical protein Mb0392 |
| M. gilvum PYR-GCK | Mflv_0255 | - | 0.0 | 77.89% (380) | oxidoreductase FAD-binding subunit |
| M. tuberculosis H37Rv | Rv0385 | - | 1e-153 | 67.01% (391) | hypothetical protein Rv0385 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4269 | - | 1e-126 | 56.48% (386) | monooxygenase |
| M. marinum M | MMAR_0644 | - | 1e-153 | 65.05% (392) | monooxygenase |
| M. avium 104 | MAV_4795 | - | 1e-152 | 66.58% (392) | oxidoreductase FAD-binding subunit |
| M. smegmatis MC2 155 | MSMEG_0719 | - | 1e-159 | 70.48% (376) | flavohemoprotein |
| M. thermoresistible (build 8) | TH_2358 | - | 1e-176 | 75.71% (387) | PROBABLE MONOOXYGENASE |
| M. ulcerans Agy99 | MUL_0128 | - | 1e-152 | 64.80% (392) | monooxygenase |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_0639|M.vanbaalenii_PYR-1 MGLEDRESMRILRDALDLDLGSE------ALIGDFHTRWFAADLSARDLF
Mflv_0255|M.gilvum_PYR-GCK --------MRILREAFEPGPGSE------RLVGEFYTRWFAADLTARDLF
MSMEG_0719|M.smegmatis_MC2_155 ----------MLRAAVDPANDSD------PLIRDFYTNWFAADLSVRDLF
TH_2358|M.thermoresistible__bu VGLDDGESLRTLRAAVDPANGSD------ELIRTFYTRWFAADLSARDLF
Mb0392|M.bovis_AF2122/97 MGLEDRDALRVLQNAFKL-DDP-------ELVRRFYAHWFALDASVRDLF
Rv0385|M.tuberculosis_H37Rv MGLEDRDALRVLQNAFKL-DDP-------ELVRRFYAHWFALDASVRDLF
MAV_4795|M.avium_104 MSLEDADALRVLRDAFAP-CDAGRPGDSGDLVHRFYTHWFALDPSVRDLF
MMAR_0644|M.marinum_M MGLEDRDALRVLRDAFAPQPDLDHKTQSSELVRSFYTNWFSLDSSVRDLF
MUL_0128|M.ulcerans_Agy99 MGLEDRDALRVLRDAFAPQPDLDHKTQSSELVRSFYTNWFSLDSSVRDLF
MAB_4269|M.abscessus_ATCC_1997 MGLEDVEALHDLVGGVELSGNK--------LVRSFYSRWFAIDPTVGDLF
* .. . *: *::.**: * :. ***
Mvan_0639|M.vanbaalenii_PYR-1 PPDLEKQRQVFAQALCWLCDELIAQRAEEPVAFLAQLGRDHRKYGVTQSH
Mflv_0255|M.gilvum_PYR-GCK PPDMAGQRQVFAHAMRWLCDELIAQRAEEPVAFLAQLGRDHRKYGVTPEH
MSMEG_0719|M.smegmatis_MC2_155 PPEMAEQRRVFAHALTWLFGELIAQRAEDPITFLAQLGRDHRKYGVTQQH
TH_2358|M.thermoresistible__bu PPDMAAQRAAFAEVLTWLLGELIAQRAHEPVAFLAQLGRDHRKYGVTQAH
Mb0392|M.bovis_AF2122/97 PPDMGAQRAAFGQALHWVYGELVAQRAEEPVAFLAQLGRDHRKYGVLPTQ
Rv0385|M.tuberculosis_H37Rv PPDMGAQRAAFGQALHWVYGELVAQRAEEPVAFLAQLGRDHRKYGVLPTQ
MAV_4795|M.avium_104 PPEMGAQRVAFGHALHWVYGELVARRAQEPVAFLAQLGRDHRKYGVLPRH
MMAR_0644|M.marinum_M PPEMSGQRAAFTRALHWVYSELVAQRAEEPIAFLAQLGRDHRKYGVQPTQ
MUL_0128|M.ulcerans_Agy99 PPEMSGQRAAFTRALHWVYSELVAQCAEEPIAFLAQLGRDHRKYGVQPTQ
MAB_4269|M.abscessus_ATCC_1997 PADMSAQREHFRQALQFVLWEMASYRTEGLVNFLAQLGRDHRKFGATDSQ
*.:: ** * ..: :: *: : :. : ***********:*. :
Mvan_0639|M.vanbaalenii_PYR-1 YATLQDALLTTLRKALV----EQWDRRLAEAVDDVVQLVVGVMSGAADAE
Mflv_0255|M.gilvum_PYR-GCK YAGLQDALLAAVRTTLT----DRWDARLEEAATDVVTLAVGVMSGAGEAE
MSMEG_0719|M.smegmatis_MC2_155 YDSMQSALYGALKARLA----DRWTDRLAAATRDAVALFIGVMRGAADAE
TH_2358|M.thermoresistible__bu YDTMHEALYTTLRDHLN----DRWTDRLAEAAHDAVTLFTGVMRGAAEAE
Mb0392|M.bovis_AF2122/97 YDTLRRALYTTLRDYLGHPSRGAWTDAVDEAAGQSLNLIIGVMSGAADAD
Rv0385|M.tuberculosis_H37Rv YDTLRRALYTTLRDYLGHPSRGAWTDAVDEAAGQSLNLIIGVMSGAADAD
MAV_4795|M.avium_104 YQTLGRALLATLRSHL----DAAWTDAVEDAARTSLNLITGVMSGAADAD
MMAR_0644|M.marinum_M YETLRRALQTTLRSHLG----SSWTDSVARAAEQSLNLIVGVMSGAADSE
MUL_0128|M.ulcerans_Agy99 YETLRRALQTTLRSHLG----SSWTDSVARAAEQSLNLIVGVMSGAADSE
MAB_4269|M.abscessus_ATCC_1997 YDTMRQALLDTTREVLQ----PIWDQRMEATATEVYTVMIEVMRSAAASD
* : ** : : * * : :. : ** .*. ::
Mvan_0639|M.vanbaalenii_PYR-1 TSPPFCDGTVLEHLRPARDISVIRLKMDHALAYHPGQYVPVQVPQWPRRW
Mflv_0255|M.gilvum_PYR-GCK TAPPFCDGTVLEHLRPTRDVSVIRLKMDHHIDYHAGQYVSVQVPQWPRRW
MSMEG_0719|M.smegmatis_MC2_155 ESPAYCDGTVVETHRLTRDVSVIRLQLDEPLFYHSGQYVTVQVPQWPRRW
TH_2358|M.thermoresistible__bu QGPPYCDGTVVEHLRVGRDVSVVRLQLDRPLFYHPGQYVTVQVPQWPRRW
Mb0392|M.bovis_AF2122/97 DAPAWWDGTVVEHIRVSRDLAVARLQLDRPLHYYPGQYVNVHVPQCPRRW
Rv0385|M.tuberculosis_H37Rv DAPAWWDGTVVEHIRVSRDLAVARLQLDRPLHYYPGQYVNVHVPQCPRRW
MAV_4795|M.avium_104 EGPAWWDGTVIGHLRVSRDLAVVRLRLDQPMPYHPGQYVNVQVPQCPRRW
MMAR_0644|M.marinum_M DGPAWWDATVIEHIPASRDLAVIRLQLDHPMPYHPGQYVNVQVPQCPRRW
MUL_0128|M.ulcerans_Agy99 DGPAWSDATVIEHIPASRDLAVIRLQLDHPMPYHPGQYVNVQVPQCPRRW
MAB_4269|M.abscessus_ATCC_1997 IGQPWWDGKVIEFHRTSRDLALIRLKLNAPMPYHCGQYVHVQVPQSPRNW
. .: *..*: **::: **::: : *: **** *:*** **.*
Mvan_0639|M.vanbaalenii_PYR-1 RYLSPAIPADPQGYLEFHIRSVAGGMVSTAIVGEARPGDRWRVSNPHGAM
Mflv_0255|M.gilvum_PYR-GCK RFLSPAIPADPQGYVEFHVRSVAGGMVSTTILGETRPGDRWRLAAPHGAM
MSMEG_0719|M.smegmatis_MC2_155 RYLSPAIPSDRSGAIEFHVRSVTGGMVSTAIVNETRHGDRWRVSSPHGAL
TH_2358|M.thermoresistible__bu RYLSPAIPADRSGAIEFHIRSVIGGMVSTAIVNETRPGDRWRISHPHGSL
Mb0392|M.bovis_AF2122/97 RYLSPAIPADPNGRIEFHVRVVPGGLVSNAIVGETRPGDRWRLSGPHGAF
Rv0385|M.tuberculosis_H37Rv RYLSPAIPADPNGRIEFHVRVVPGGLVSNAIVGETRPGDRWRLSGPHGAF
MAV_4795|M.avium_104 RYLSPAIPADPGCGIEFHVRLVPGGLVSTAIVNETRPGDRWRLSSPHGGL
MMAR_0644|M.marinum_M RYLSPAIPADLEGRIEFHVRVVPGGLVSTAMVNETRTGDRWRLASPHGGL
MUL_0128|M.ulcerans_Agy99 RYLSPAIPADLEGRIEFHVRVVPGGLVSTAMVNETRTGDRWRLASPHGGL
MAB_4269|M.abscessus_ATCC_1997 RYLSLAIPPDPEGYIEFHVRAVPGGLVSGDIVNKTKVGDTWRISPPLGAL
*:** ***.* :***:* * **:** ::.::: ** **:: * *.:
Mvan_0639|M.vanbaalenii_PYR-1 EIDRDGGDVLMVAGSTGLAPLRTLIMDLARFSQNPRVHLFFGAKYPCELY
Mflv_0255|M.gilvum_PYR-GCK HVDREAGDVLMVAGSTGLAPLRALIMDMCRFAANPRVHLFFGAKYPCELY
MSMEG_0719|M.smegmatis_MC2_155 EVNRSGEDVLMVAGSTGLAPLRALIMDMTLHAENPRVHLFFGGRFPCDLY
TH_2358|M.thermoresistible__bu HIDRDGGDVLMVAGSTGLAPLRTLIMDLTRFGVNPRVHLFFGARYPCDLY
Mb0392|M.bovis_AF2122/97 RVDRDGGDVLMVAGSTGLAPLRALIIDLSRFAVNPRVHLFFGARYACELY
Rv0385|M.tuberculosis_H37Rv RVDRDGGDVLMVAGSTGLAPLRALIIDLSRFAVNPRVHLFFGARYACELY
MAV_4795|M.avium_104 RVDRDGGDVLMVAGSTGLAPLRALIMDLSRFAVNPRVHLFFGARYRCELY
MMAR_0644|M.marinum_M HVDRTGGDVLMVAGSTGLAPLRALILDMGRFVENPRVHLFFGARYFCELY
MUL_0128|M.ulcerans_Agy99 HVDRTGGDVLMVAGSTGLAPLRALILDMGRFVENPRVHLFFGARYFCELY
MAB_4269|M.abscessus_ATCC_1997 SVNRDGGDILMVAGSTGIAPLRCLIMELSQWAENPRVHLFYGARYPQELY
::* . *:********:**** **::: *******:*.:: :**
Mvan_0639|M.vanbaalenii_PYR-1 DLRTLWEIASTNPWLSVTPVSELNFDPPWAADYPDVTPPRGLHVRQLGLL
Mflv_0255|M.gilvum_PYR-GCK DLPTLWEVASMNPWLSVTPVSEFDFDPPWAAEYPDNRPPRGLHVRQTGRL
MSMEG_0719|M.smegmatis_MC2_155 DLKTLWTIASTNPWLSVTPVSEYSTDPPWARDYPDPTPPRGLHVRQTGTL
TH_2358|M.thermoresistible__bu DLKTLWQIASTNPWLSVTPVSEYSVDPPWASEYPDVQPPRGLHVRQTGLL
Mb0392|M.bovis_AF2122/97 DLPTLWQIAAHNPWLSVSPVSEYNGDPAWAADYPDVSAPRGLHVRQTGRL
Rv0385|M.tuberculosis_H37Rv DLPTLWQIAAHNPWLSVSPVSEYNGDPAWAADYPDVSAPRGLHVRQTGRL
MAV_4795|M.avium_104 DLPTLWQIASHNPWLSVSPVSEYRADPPWAADYPDVTPPRGLHVHQTGRL
MMAR_0644|M.marinum_M DLRTLWQVAAHNPWLSVSPVAEYKLDPSWATDYPDVSPPRGLHVRQTGRL
MUL_0128|M.ulcerans_Agy99 DLRTLWHVAAHNPWLSVSPVAEYKLDPSWATDYPDVSPPRGLHVRQTGRL
MAB_4269|M.abscessus_ATCC_1997 DLWTLWHIASTNPWLSVTPVTEYPRNPDWATEYHDPTPPRGLHVRQTGLL
** *** :*: ******:**:* :* ** :* * .******:* * *
Mvan_0639|M.vanbaalenii_PYR-1 PEVVTRYGNWSDRQILLSGRPAMVQATKAALITKGAPAERIQHDPLAN-
Mflv_0255|M.gilvum_PYR-GCK DEVVTRYGSWGDRQILVCGRPEMVAATRSALIAKGAPAERIQHDPLGN-
MSMEG_0719|M.smegmatis_MC2_155 ADVVTRYGNWGDRQILICGGPQMVEATKAALIAKGAPPERIQHDPLTAR
TH_2358|M.thermoresistible__bu PEVVTRYGAWSDRQILICGSPEMVQATKAALIAKGAPPERIQHDPLSY-
Mb0392|M.bovis_AF2122/97 PDVVSRYGGWGDRQILICGGPAMVRATKAALIAKGAPPERIQHDPLSR-
Rv0385|M.tuberculosis_H37Rv PDVVSRYGGWGDRQILICGGPAMVRATKAALIAKGAPPERIQHDPLSR-
MAV_4795|M.avium_104 PEVVTKYGGWGDRQILICGGPRMVAATKAALIAKGAAAQRIQHDPLSR-
MMAR_0644|M.marinum_M AEVVTNYGNWGDRQILICGGPAMVRTTKAALIAKGAPRERIQHDPLP--
MUL_0128|M.ulcerans_Agy99 AEVVTNYGNWGDRQILICGGPAMVRTTKAALIAKGAPRERIQHDPLP--
MAB_4269|M.abscessus_ATCC_1997 SEVVTAYGGWGDRQILIGGSASMIQATKEALVSRGADASRIQHDPL---
:**: ** *.*****: * . *: :*: **:::** .*******