For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRVDTPVQDVEMDGPIDLRDPYPMFARHRAEGGVFRGSVMDWSKTPESLMPEKLYAAVSFDAVNRVFRDG KVFNSKIYDATIGLFIGPTILAMEGKPHWEHRNLVSAAFKTRSLARWEPEIVRPVVNGLIDEFIDRGSAD LVRDFTFEFPTRVISRLLGLPEDDLPWFRKRAVELISYTINHKRAFEASAALKDYFLAQIEKRRCAPTDD IIGDLVSAEIDGEHLTDEAIFSFLRLLLPAGLETTYRSSGNLLYLLLTHRDQFDAVDADHELIGQAIEEG LRYETPLTTVQRFTTEDTELEGVPIPAGAVIDVCIGSANRDEKRWERSEEFDIFRKRVPHLSFAAGEHTC MGLHLARMETRVAVETLLTRLSDIRLVTDDDPHIHGQPFRSPTALPVTFSPAAAK
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4339 | - | - | 100% (405) | cytochrome P450 |
M. gilvum PYR-GCK | Mflv_4150 | - | 2e-97 | 50.13% (385) | cytochrome P450 |
M. gilvum PYR-GCK | Mflv_2431 | - | 3e-44 | 34.81% (362) | cytochrome P450 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0789c | cyp123 | 3e-42 | 29.74% (390) | cytochrome P450 123 |
M. tuberculosis H37Rv | Rv3518c | cyp142 | 6e-45 | 34.67% (323) | cytochrome P450 monooxygenase 142 |
M. leprae Br4923 | MLBr_02088 | - | 2e-34 | 29.14% (326) | putative cytochrome p450 |
M. abscessus ATCC 19977 | MAB_1216c | - | 6e-46 | 31.99% (397) | cytochrome P450 |
M. marinum M | MMAR_4008 | cyp187A5 | 1e-166 | 71.68% (399) | cytochrome P450 187A5 Cyp187A5 |
M. avium 104 | MAV_1598 | - | 1e-177 | 78.12% (384) | cytochrome P450 superfamily protein |
M. smegmatis MC2 155 | MSMEG_2240 | - | 0.0 | 80.30% (401) | cytochrome P450 |
M. thermoresistible (build 8) | TH_2944 | - | 1e-175 | 78.12% (384) | PUTATIVE cytochrome P450 |
M. ulcerans Agy99 | MUL_3872 | cyp187A5 | 1e-166 | 71.43% (399) | cytochrome P450 187A5 Cyp187A5 |
M. vanbaalenii PYR-1 | Mvan_2007 | - | 0.0 | 86.60% (403) | cytochrome P450 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4339|M.gilvum_PYR-GCK ---------------------------MRVDTPVQD-VEM-DGPIDLRDP Mvan_2007|M.vanbaalenii_PYR-1 -----------------------------METPVQD-LAK-DEPIDLRDP MSMEG_2240|M.smegmatis_MC2_155 -----------------------------MDSRIRDDPAV-DTAALLRDP TH_2944|M.thermoresistible__bu ------------------------------------MTAA-KPAGYLRDP MMAR_4008|M.marinum_M -----------------------------MTSPVHSVAGTGDQAVNPRNP MUL_3872|M.ulcerans_Agy99 -----------------------------MTSPVHSVAGTGDQAVNPRNP MAV_1598|M.avium_104 -----------------------------MTTNVPTAAGG--ETVSLRDP Mb0789c|M.bovis_AF2122/97 --------------------------MTVRVGDPE-LVLDPYDYDFHEDP MAB_1216c|M.abscessus_ATCC_199 --------------------------MTVAETSAVPLVFDPYDYDFHEDP MLBr_02088|M.leprae_Br4923 MRTCVPTRTCVYAFIEYLSHNRPMGTNPPSLVEAQMLLLRLIDPGTRADP Rv3518c|M.tuberculosis_H37Rv ------------------------------MTEAPDVDLADGNFYASREA :. Mflv_4339|M.gilvum_PYR-GCK YPMFARHRAEGGVFRGSVMDWSKTPESLMPEKLYAAVSFDAVNRVFRDGK Mvan_2007|M.vanbaalenii_PYR-1 YPMFARRRAEGGVFRGSVMDWSRTPDSLRPENLYAAVSFDAVNRVFRDGK MSMEG_2240|M.smegmatis_MC2_155 YPIFARYRAQAGVFRGSVMDWSKTPKELMPEHQYAAMSFDAVNTVFRDGK TH_2944|M.thermoresistible__bu YPFFAERRRGSGVFHGTVIDYSRTPESLRPTDGYAAMSFDAVNRVLRDGR MMAR_4008|M.marinum_M YPFFAQQRRRGGVFPGTVMDYSKTPASLRPRREFSAMSFAAVNTVFRDSR MUL_3872|M.ulcerans_Agy99 YPFFAQQRRRGGVFPGTVMDYSKTPESLRPRREFSAMSFAAVNTVFRDSR MAV_1598|M.avium_104 YPFFARKRREAGVFAGTVMDYSKTPESLMPKQEYSAVSFDAVNTVFRDGR Mb0789c|M.bovis_AF2122/97 YPYYRRLRDEAPLYRNEERNFWAVSRHHDVLQGFRDS--TALSNAYGVSL MAB_1216c|M.abscessus_ATCC_199 YPYYRRLRDEAPLYRNDDLKFWALSRHHDVLQGFRNS--EALSNANGVSM MLBr_02088|M.leprae_Br4923 FPVYRALIDYGPMQLPG-MPLTVFSSFSDCDEALRHP--LSASDRLKATL Rv3518c|M.tuberculosis_H37Rv RAAYRWMRANQPVFRDR-NGLAAASTYQAVIDAERQP--ELFSNAGGIRP . : : . . Mflv_4339|M.gilvum_PYR-GCK VFNSKIYDATIGLFIGPTILAMEGKPHWEHRNLVSAAFKTRSLARWEPEI Mvan_2007|M.vanbaalenii_PYR-1 VFNSHIYDSTIGLFIGPTILAMEGKTHWEHRNLVSAAFKTRSLARWEPEI MSMEG_2240|M.smegmatis_MC2_155 TFNSKIYDSTIGLFIGPSILAMEGKTHRDHRNLVSAAFKSKSLARWEPEI TH_2944|M.thermoresistible__bu VFSSALYDTTIGLFTGPTLLAMEGGTHRAHRNLISAAFKTKALARWEPSI MMAR_4008|M.marinum_M AFTSKTYDKTIGLFMGPTILAMEGKQHRDHRNLVSAAFKSKALARWEPAV MUL_3872|M.ulcerans_Agy99 AFTSKTYDKMIGLFMGPTILAMEGKQHRDHRNLVSAAFKSKALARWEPAV MAV_1598|M.avium_104 VFSSKPYDKTIGLFMGPTILAMEGKKHRDHRNLVSAAFKSKALARWEPTI Mb0789c|M.bovis_AF2122/97 DPSSRTS----EAYRVMSMLAMDDPAHLRMRTLVSKGFTPRRIRELE-PQ MAB_1216c|M.abscessus_ATCC_199 DKASFGP----HAKLVMSFLAMDDPEHLRLRALVSKGFTPRRIRELE-GQ MLBr_02088|M.leprae_Br4923 AQQAIAAGAEPRPFYASSFMFLDPPDHTRLRKLVSKAFAPKVVQALE-GD Rv3518c|M.tuberculosis_H37Rv DQPALPM-----------MIDMDDPAHLLRRKLVNAGFTRKRVKDKE-AS : :: :: * * *:. .* : : * Mflv_4339|M.gilvum_PYR-GCK VRPVVNGLIDEFIDRGS---ADLVRDFTFEFPTRVISRLLGLPEDDLPWF Mvan_2007|M.vanbaalenii_PYR-1 VRPVVNELIDEFIDDGR---ADLVRDFTFEFPTRVISRLLGLPEEDLPWF MSMEG_2240|M.smegmatis_MC2_155 ARPICEALVDEFVDTGS---ADLVRDYTFEFPTRVISKLLGLPEEDLPWF TH_2944|M.thermoresistible__bu VRPIVNALIDEFIDTGT---ADLVRDFTFEFPTRVISRMLGLPEEDLPTF MMAR_4008|M.marinum_M IRPICNALIDDFIDAGR---AELVGDFTFEFPTRVIARLLGLPDEDLAMF MUL_3872|M.ulcerans_Agy99 IRPICNALIDDFIDAGR---AELVGDFTFEFPTRVIARLLGLPDEDLAMF MAV_1598|M.avium_104 VRPICNALIDDFIDAGT---ADLVRQFTFEFPTRVIARLLGLPDEDLPMF Mb0789c|M.bovis_AF2122/97 VLELARIHLDSALQTES---FDFVAEFAGKLPMDVISELIGVPDTDRARI MAB_1216c|M.abscessus_ATCC_199 VVALARTHLDRALANASDRSFDFIAEYAGKLPMDVISELMGVPESDRARI MLBr_02088|M.leprae_Br4923 IAALVDSLLDKGAAAGQ---FDVIADLAFPLAVAVICRLLGVPYEDAPEF Rv3518c|M.tuberculosis_H37Rv IAALCDTLIDAVCERGE---CDFVRDLAAPLPMAVIGDMLGVRPEQRDMF : :* :.: : : :. ** ::*: : : Mflv_4339|M.gilvum_PYR-GCK RKRAVELISYT-----------INHKRAFEASAALKDYFLAQIEKRRCAP Mvan_2007|M.vanbaalenii_PYR-1 RKRAVELISYA-----------VNYKKAFEASAALKDYFLGQIDKRRSAP MSMEG_2240|M.smegmatis_MC2_155 RRRAVELISYS-----------VKYKRAFEASAALKDYFLDQIERRRSRP TH_2944|M.thermoresistible__bu RRWAVQLISYT-----------VDYQRAFEASAALKDYFLEQMESRRSKP MMAR_4008|M.marinum_M HQRAVQLISYT-----------VNYQLAFEASAALKEYFLEQIDRRRSKP MUL_3872|M.ulcerans_Agy99 HQRAVQLISYT-----------VNYQLAFEASAALKEYFLEQIDRRRSKP MAV_1598|M.avium_104 HTRAVQLISYH-----------VDYERAFEASAALKDYFLEQIEQRKSKP Mb0789c|M.bovis_AF2122/97 RALADAVLHREDGVADVP-------PPAMAASIELMRYYADLIAEFRRRP MAB_1216c|M.abscessus_ATCC_199 RELADGVMHREDGLADVP-------PEAIQASFDLMTYYIEMVRERRRRP MLBr_02088|M.leprae_Br4923 GRVSALLVQSVDPFITITGEPPEATEERLRAGVWLRDYLEQLVKCRRGTP Rv3518c|M.tuberculosis_H37Rv LRWSDDLVTFLSSHVSQED-----FQITMDAFAAYNDFTRATIAARRADP : :: : * : : : * Mflv_4339|M.gilvum_PYR-GCK TDDIIGDLVSAEIDGEHLTDEAIFSFLRLLLPAGLETTYRSSGNLLYLLL Mvan_2007|M.vanbaalenii_PYR-1 TEDIIGDLVSAEIDGERLTDEAIFSFLRLLLPAGLETTFRSSGNLLYLLL MSMEG_2240|M.smegmatis_MC2_155 TEDIIGDLVTAEIDGEKLTDEAIYSFLRLLLPAGLETTYRSSGNLLYLLL TH_2944|M.thermoresistible__bu TDDMIGDLVTAEIDGEKLSDEAIYSFLRLLLPAGLETTYRSSGNLIYLLL MMAR_4008|M.marinum_M SEDIIGDLVTAEIDGEKLSEEAIYSFLRLLLPAGLETTYRSSGNLLYLLL MUL_3872|M.ulcerans_Agy99 SEDIIGDLVTAEIDGEKLSEEAIYSFLRLLLPAGLETTYRSSGNLLYLLL MAV_1598|M.avium_104 TEDIIGDLVTAEIDGEKLSDEAIYSFLRLLLPAGLETTYRSSGNLLYLLL Mb0789c|M.bovis_AF2122/97 ANNLTSALLAAELDGDRLSDQEIMAFLFLMVIAGNETTTKLLANAVYWAA MAB_1216c|M.abscessus_ATCC_199 TEDLTSALLQAEIDGDRLTDEEVLAFLFLMVIAGNETTTKLLANAVYWGH MLBr_02088|M.leprae_Br4923 GEDLISRLIELDESGDQLTEEEIIATCGLLLVAGHETTVNLIANAVLAML Rv3518c|M.tuberculosis_H37Rv TDDLVSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLL ::: . *: : .*::*::: : *:: .* *** . .. Mflv_4339|M.gilvum_PYR-GCK THRDQFDAVDADHELIGQAIEEGLRYETPLTTVQRFTTEDTELEGVPIPA Mvan_2007|M.vanbaalenii_PYR-1 THRDQFEAVNADHALIGAAIEEGLRYETPLTTVQRFANEDTEIDGVEIPA MSMEG_2240|M.smegmatis_MC2_155 THPDQFAAVQNDHDLIGAAIEEGLRYETPLTTVQRSATKDTELEGVQIPA TH_2944|M.thermoresistible__bu THPEQFAAVAADPGLIPQAIEEGLRHETPLTTVQRLTTEDTELCGAAIPA MMAR_4008|M.marinum_M AHPDQFMAVRAHRELIPQAIEEGLRFETPLTTVQRFTTKDTEVQGVPIPA MUL_3872|M.ulcerans_Agy99 AHPDQFMAVRAHRELIPQAIEEGLRFETPLTTVQRFTTKDTEVQGVPIPA MAV_1598|M.avium_104 THPDQFAALQADRELLAPAIEEGLRFETPLTTVQRFTTEDTELHGVRIPA Mb0789c|M.bovis_AF2122/97 HHPGQLARVFADHSRIPMWVEETLRYDTSSQILARTVAHDLTLYDTTIPE MAB_1216c|M.abscessus_ATCC_199 RNPDQLATVHADHDRIPLWVEESLRYDTSSQILARTVAEDITVYDTKIPA MLBr_02088|M.leprae_Br4923 RNPSQWKALSSNPQRAPLVVEETLRYDPAIHLIGRVAAKDMTIGQTTLTE Rv3518c|M.tuberculosis_H37Rv RNRDQWDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCA : * : . :** ** .. : * * . . : Mflv_4339|M.gilvum_PYR-GCK GAVIDVCIGSANRDEKRWERSEEFDIFRKR-VPHLSFAAGEHTCMGLHLA Mvan_2007|M.vanbaalenii_PYR-1 GSVIDVCIGSANRDESRWERAEQFDIFRTR-TPHISFAAGEHTCMGLHLA MSMEG_2240|M.smegmatis_MC2_155 GAVIDVCIGSANRDENRWERPEEFDIFRKR-IPHITFAAGEHTCMGLHLA TH_2944|M.thermoresistible__bu GAVVDTCIGSANRDETRWDRPEEFDIFRDR-VPHLSFAAGEHTCMGLHLA MMAR_4008|M.marinum_M RSVIGVCMGSANRDEHRWQRPEVFDIFRER-IPHISFAAGEHTCLGLHLA MUL_3872|M.ulcerans_Agy99 RSVIGVCMGSANRDEHRWQRPEVFDIFRER-IPHISFAAGEHTCLGLHLA MAV_1598|M.avium_104 RSVIGVCIGSANRDERRWERSEEFDIFRKH-VPHISFAAGEHTCLGLHLA Mb0789c|M.bovis_AF2122/97 GEVLLLLPGSANRDDRVFDDPDDYRIGREIGCKLVSFGSGAHFCLGAHLA MAB_1216c|M.abscessus_ATCC_199 GDILLLLPGSANRDDRVFDDADQYRIGREIGAKLVSFGSGAHFCLGAHLA MLBr_02088|M.leprae_Br4923 GDTMVLLLAAANRDPAVYSRPDEFDPDRPS-SRHLAFAVGSHFCLGAALA Rv3518c|M.tuberculosis_H37Rv GEKMMLLFESANFDEAVFCEPEKFDVQRNP-NSHLAFGFGTHFCLGNQLA : :** * : .: : * ::*. * * *:* ** Mflv_4339|M.gilvum_PYR-GCK RMETRVAVETLLTRLSDIRLVTDDDPHIHGQP--FRSPTALPVTFSPAAA Mvan_2007|M.vanbaalenii_PYR-1 RMETRVAAETLLSRLSAIELLTDGDPHIHGQP--FRSPTALPVTFTPSRA MSMEG_2240|M.smegmatis_MC2_155 RMETRVAMETLLNRVTDLRLIADDDPHIFGQP--FRSPTAIPVTFRPAG- TH_2944|M.thermoresistible__bu RMETRVALETLLSRVHDLRLVTDGDPHIFGQP--FRSPTAIPVTFDPVR- MMAR_4008|M.marinum_M RLETRVALECLLDRLTNIDLATADDPHIHGQP--FRSPTALPVTFEAVPT MUL_3872|M.ulcerans_Agy99 RLETRVALECLLDRLTNIDLATADDPHIHGQP--FRSPKALPVTFEAVPT MAV_1598|M.avium_104 RLETRVAMECLLNRLTNVTLLSDGDPHIHGQP--FRSPTALPVTFDAK-- Mb0789c|M.bovis_AF2122/97 RMEARVALGALLRRIRNYEVDDDNVVRVHSSN--VRGFAHLPISVQAR-- MAB_1216c|M.abscessus_ATCC_199 RMEAKVALTELFTRISGYEIDERNSVRVHSSN--VRGFAHLPMTVQLREG MLBr_02088|M.leprae_Br4923 RLEATVTLSAISARFPQVQLAG-ELVYKPNVA--MRGMSALPVQV----- Rv3518c|M.tuberculosis_H37Rv RLELSLMTERVLRRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPSPP *:* : : *. : . . :*: . Mflv_4339|M.gilvum_PYR-GCK K- Mvan_2007|M.vanbaalenii_PYR-1 RP MSMEG_2240|M.smegmatis_MC2_155 -- TH_2944|M.thermoresistible__bu -- MMAR_4008|M.marinum_M -- MUL_3872|M.ulcerans_Agy99 -- MAV_1598|M.avium_104 -- Mb0789c|M.bovis_AF2122/97 -- MAB_1216c|M.abscessus_ATCC_199 R- MLBr_02088|M.leprae_Br4923 -- Rv3518c|M.tuberculosis_H37Rv LG