For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTDRIEVSRIIAAPPADIFGVLCDPQGHVAIDATGMLQDADGSPARAIGDSFVVHMDRAALNDFPELGRY DVTVAITQYEQDALIAWTILGQLKPQIGHVYGYRLEPADTGTLVTSFYDWSDIHQHWRDMGIFPVISELA LRGTLGILDRTVRRGYPRS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3906 | - | - | 100% (159) | hypothetical protein Mflv_3906 |
M. gilvum PYR-GCK | Mflv_0146 | - | 2e-11 | 31.58% (152) | hypothetical protein Mflv_0146 |
M. gilvum PYR-GCK | Mflv_3232 | - | 6e-10 | 28.95% (152) | hypothetical protein Mflv_3232 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0091 | - | 9e-06 | 26.05% (119) | hypothetical protein Mb0091 |
M. tuberculosis H37Rv | Rv0088 | - | 9e-06 | 26.05% (119) | hypothetical protein Rv0088 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2457c | - | 2e-07 | 32.03% (128) | hypothetical protein MAB_2457c |
M. marinum M | MMAR_0253 | - | 4e-06 | 29.27% (123) | hypothetical protein MMAR_0253 |
M. avium 104 | MAV_5243 | - | 1e-07 | 27.19% (114) | hypothetical protein MAV_5243 |
M. smegmatis MC2 155 | MSMEG_4744 | - | 2e-13 | 33.54% (161) | hypothetical protein MSMEG_4744 |
M. thermoresistible (build 8) | TH_4053 | - | 2e-06 | 27.17% (173) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4861 | - | 3e-06 | 29.27% (123) | hypothetical protein MUL_4861 |
M. vanbaalenii PYR-1 | Mvan_2498 | - | 2e-76 | 84.18% (158) | hypothetical protein Mvan_2498 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3906|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2498|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_4744|M.smegmatis_MC2_155 -------------------------------------------------- TH_4053|M.thermoresistible__bu -------------------------------------------------- MMAR_0253|M.marinum_M -------------------------------------------------- MUL_4861|M.ulcerans_Agy99 -------------------------------------------------- MAB_2457c|M.abscessus_ATCC_199 -------------------------------------------------- Mb0091|M.bovis_AF2122/97 MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYR Rv0088|M.tuberculosis_H37Rv MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYR MAV_5243|M.avium_104 -------------------------------------------------- Mflv_3906|M.gilvum_PYR-GCK -----------------------MTDRIEVSRIIAAPPADIFGVLCDPQG Mvan_2498|M.vanbaalenii_PYR-1 -----------------------MTDRIEVPRTIAAPASEIFSVLRDPQG MSMEG_4744|M.smegmatis_MC2_155 ---------------------MSTTKRYVVTRRIHAAPQDVFRVLADPAR TH_4053|M.thermoresistible__bu -----------------MSDIQTTGTSLAVHTTVNAPARTVFDVLADPTT MMAR_0253|M.marinum_M ------------MVDTDAPLPDRSERVVSATREIAAGAAQIFELIADPSR MUL_4861|M.ulcerans_Agy99 ------------MVDTDAPLPDRSERVVSATREIAAGAAQIFELIADPSR MAB_2457c|M.abscessus_ATCC_199 ------------MTD--------DVRVVSASREVQASAAAIFELIADPAR Mb0091|M.bovis_AF2122/97 AVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRR Rv0088|M.tuberculosis_H37Rv AVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRR MAV_5243|M.avium_104 ---------------MTVTVVDRGPRQVSRRVDVAAPAAQLYALVADPRR : * . :: :: ** Mflv_3906|M.gilvum_PYR-GCK HVAIDATGMLQD-ADGSPARAIGDSFVVHMDRAALNDFPELGRYDVTVAI Mvan_2498|M.vanbaalenii_PYR-1 HVAIDATGMLQD-ADGDPVRAVGDTFVVHMDREALNDFPELGRYDVTVQI MSMEG_4744|M.smegmatis_MC2_155 HKDTEPGDWVRDAIDPQPITDTGQIFAINMFLEQAGG-----HYVMHNRV TH_4053|M.thermoresistible__bu HARIDGTGWVREPVDGARLTGAGQIFRMGMYHENHPHR----HYEIANRV MMAR_0253|M.marinum_M QPDWDGNDNLAHCAAGQRVHRVGDVFRMTLTLGSVRE----------NHI MUL_4861|M.ulcerans_Agy99 QPDWDGNDNLAHCAAGQRVHRVGDVFRMTLTLGSVRE----------NHI MAB_2457c|M.abscessus_ATCC_199 QREWDGNENLAEAAAGQRAHAVGDVFVMTLTTGADRE----------NHI Mb0091|M.bovis_AF2122/97 HRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLPYR-------ITSRV Rv0088|M.tuberculosis_H37Rv HRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLPYR-------ITSRV MAV_5243|M.avium_104 HHELDGSGTVRDNISVPAKLVEGSKFSTHMRMFGLPYR-------ITSTI : : : *. * : : Mflv_3906|M.gilvum_PYR-GCK TQYEQDALIAWTILG-------------QLKPQIGHVYGYRLEPADT--- Mvan_2498|M.vanbaalenii_PYR-1 TEYEQDSLIAWTILG-------------RLRPQIGHVYGYRLEPAEQ--- MSMEG_4744|M.smegmatis_MC2_155 TEYDEDRTIAWEPG---------LLDDAGNHSPGGWFWRYDLQPDGD--- TH_4053|M.thermoresistible__bu EVFDPPHAIAWQPGAEPRHIPGRGADATGPVEFGGWIWRYDLAPQHAPGA MMAR_0253|M.marinum_M VEFTEARLIAWRPSE-------------LGKTPPGHLWRWELTPISG--- MUL_4861|M.ulcerans_Agy99 VEFTEARLIAWRPSE-------------LGKTPPGHLWRWELTPISG--- MAB_2457c|M.abscessus_ATCC_199 VEFEEARRIAWLPSE-------------VGKRPPGHLWRWELRPLDD--- Mb0091|M.bovis_AF2122/97 TALKPNELVEWSHPL-------------------GHRWRWEFESLSP--- Rv0088|M.tuberculosis_H37Rv TALKPNELVEWSHPL-------------------GHRWRWEFESLSP--- MAV_5243|M.avium_104 TELKPNEVVEWRHPL-------------------GHRWRWEFESLSP--- : * * : : : . Mflv_3906|M.gilvum_PYR-GCK --GTLVTSFYDWSDIHQHWR-----DMGIFPVISELALRGTLGILDRTVR Mvan_2498|M.vanbaalenii_PYR-1 --GTLVTSFYDWSGIHQQWR-----EAGIFPVVSELALRGTLGILDRTVR MSMEG_4744|M.smegmatis_MC2_155 --ATAVTLTYDWTDTPQSFAD----QIGGMPPFPEQFIAESLATLDRAVR TH_4053|M.thermoresistible__bu PAGTRVTLTYDWSQVPAADRR----AMR-FPPFPPEHLVNSLRHLKELAE MMAR_0253|M.marinum_M -TRTLVTHTYDWTELSDPAR------FPRARATTTVQLRASLDRLAGHAE MUL_4861|M.ulcerans_Agy99 -TRTLVTHTYDWTELSDPAR------FPRARATTTVQLRASLDRLAGHAE MAB_2457c|M.abscessus_ATCC_199 -DRTQVTHTYDWTNLTDEKR------LVRARNTTSERLQASVDRLAALAE Mb0091|M.bovis_AF2122/97 -TLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYA Rv0088|M.tuberculosis_H37Rv -TLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYA MAV_5243|M.avium_104 -TRTRVTETFDYRDAGALKNRLKYYERMGFAKANASGIEATLAKLRDRYP * ** :*: : :: * Mflv_3906|M.gilvum_PYR-GCK RGYPRS Mvan_2498|M.vanbaalenii_PYR-1 RGYRRG MSMEG_4744|M.smegmatis_MC2_155 ------ TH_4053|M.thermoresistible__bu RDVPR- MMAR_0253|M.marinum_M AAAAGD MUL_4861|M.ulcerans_Agy99 AAAAGD MAB_2457c|M.abscessus_ATCC_199 SGA--- Mb0091|M.bovis_AF2122/97 RGRA-- Rv0088|M.tuberculosis_H37Rv RGRA-- MAV_5243|M.avium_104 G-----