For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TVTVVDRGPRQVSRRVDVAAPAAQLYALVADPRRHHELDGSGTVRDNISVPAKLVEGSKFSTHMRMFGLP YRITSTITELKPNEVVEWRHPLGHRWRWEFESLSPTRTRVTETFDYRDAGALKNRLKYYERMGFAKANAS GIEATLAKLRDRYPG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_5243 | - | - | 100% (156) | hypothetical protein MAV_5243 |
M. avium 104 | MAV_5230 | - | 2e-08 | 30.58% (121) | hypothetical protein MAV_5230 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0091 | - | 5e-69 | 79.22% (154) | hypothetical protein Mb0091 |
M. gilvum PYR-GCK | Mflv_2610 | - | 2e-40 | 51.95% (154) | hypothetical protein Mflv_2610 |
M. tuberculosis H37Rv | Rv0088 | - | 5e-69 | 79.22% (154) | hypothetical protein Rv0088 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4338c | - | 3e-59 | 68.83% (154) | hypothetical protein MAB_4338c |
M. marinum M | MMAR_0234 | - | 6e-71 | 80.52% (154) | hypothetical protein MMAR_0234 |
M. smegmatis MC2 155 | MSMEG_3417 | - | 4e-12 | 31.25% (112) | hypothetical protein MSMEG_3417 |
M. thermoresistible (build 8) | TH_4053 | - | 1e-05 | 26.12% (134) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4879 | - | 5e-69 | 79.22% (154) | hypothetical protein MUL_4879 |
M. vanbaalenii PYR-1 | Mvan_0758 | - | 4e-09 | 28.70% (115) | hypothetical protein Mvan_0758 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0234|M.marinum_M -------------------------------------------------- MUL_4879|M.ulcerans_Agy99 -------------------------------------------------- Mb0091|M.bovis_AF2122/97 MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYR Rv0088|M.tuberculosis_H37Rv MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYR MAV_5243|M.avium_104 -------------------------------------------------- MAB_4338c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_2610|M.gilvum_PYR-GCK -------------------------------------------------- MSMEG_3417|M.smegmatis_MC2_155 -------------------------------------------------- TH_4053|M.thermoresistible__bu -------------------------------------------------- Mvan_0758|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_0234|M.marinum_M ---------MTRGELMTVVVVDAGPRRVSRSVEVAAPAAELFAIVADPRR MUL_4879|M.ulcerans_Agy99 ---------------MTVVVVDAGPRRVSRSVEVAALAAELFAIVADPRC Mb0091|M.bovis_AF2122/97 AVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRR Rv0088|M.tuberculosis_H37Rv AVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRR MAV_5243|M.avium_104 ---------------MTVTVVDRGPRQVSRRVDVAAPAAQLYALVADPRR MAB_4338c|M.abscessus_ATCC_199 ---------------MSVSVVDPGPQQISRSVEVSAPATELFAIAADPRR Mflv_2610|M.gilvum_PYR-GCK ----------MRMTISTLKTEDAGPKTVSRSVQVSAPVATLFDLIADPHR MSMEG_3417|M.smegmatis_MC2_155 ------------MSN----DIMTAER------IVDAPAATVFGVLADPTA TH_4053|M.thermoresistible__bu ------------MS-----DIQTTGTSLAVHTTVNAPARTVFDVLADPTT Mvan_0758|M.vanbaalenii_PYR-1 ------------MSPACDRGLTRMTETLIVDTIVDAPASTVFAVLADPAT * * . :: : *** MMAR_0234|M.marinum_M HSELDGSGTVRD-NIKAPVTLVAGTKFSTNMRMFG-----VPYRITSTVT MUL_4879|M.ulcerans_Agy99 HSELDGSGTVRD-NIKAPVTLVAGTKFSTNMRMFG-----VPYRITSTVT Mb0091|M.bovis_AF2122/97 HRELDGSGTVRG-NIKVPAKLVVGSKFSTKMKLFG-----LPYRITSRVT Rv0088|M.tuberculosis_H37Rv HRELDGSGTVRG-NIKVPAKLVVGSKFSTKMKLFG-----LPYRITSRVT MAV_5243|M.avium_104 HHELDGSGTVRD-NISVPAKLVEGSKFSTHMRMFG-----LPYRITSTIT MAB_4338c|M.abscessus_ATCC_199 HHELDGSGTVGQ-NIRTPDHLQVGSRFSTGMRMFG-----LPYRITSTVT Mflv_2610|M.gilvum_PYR-GCK HPEIDGSGTVRDIDVSGPHRLSPGDKFTVGMTQYG-----VPYKITSKAT MSMEG_3417|M.smegmatis_MC2_155 HHAIDGTGWVRE-SLDSAKLTTVGQIFRMAMYHRN--FGGMHYTVANRVE TH_4053|M.thermoresistible__bu HARIDGTGWVRE-PVDGARLTGAGQIFRMGMYHEN--HPHRHYEIANRVE Mvan_0758|M.vanbaalenii_PYR-1 HAAIDGTGWVRE-SLDGEPITRSGQMFRMAMYFANPAFADGHYEVANKVI * :**:* * : * * * . * ::. MMAR_0234|M.marinum_M ALKPNELVEWR-------------------HPAGHRWRWEFESLS----P MUL_4879|M.ulcerans_Agy99 ALKPNELVEWR-------------------HPAGHRWRWEFESLS----P Mb0091|M.bovis_AF2122/97 ALKPNELVEWS-------------------HPLGHRWRWEFESLS----P Rv0088|M.tuberculosis_H37Rv ALKPNELVEWS-------------------HPLGHRWRWEFESLS----P MAV_5243|M.avium_104 ELKPNEVVEWR-------------------HPLGHRWRWEFESLS----P MAB_4338c|M.abscessus_ATCC_199 ELDPDKVVEWR-------------------HPLGHRWRWEFVALS----P Mflv_2610|M.gilvum_PYR-GCK KVEENRVVEWE-------------------HPLGHRWRWELAEVG----P MSMEG_3417|M.smegmatis_MC2_155 VFDPPIAIAWLPGED---------TDDGTLKFGGWSWRYDLESL----AP TH_4053|M.thermoresistible__bu VFDPPHAIAWQPGAEPRHIPGRGADATGPVEFGGWIWRYDLAPQHAPGAP Mvan_0758|M.vanbaalenii_PYR-1 AFEPDRAIGWEPGQA---------REDGTVEHGGWTWRYDLEAV----GP .. : * . * **::: * MMAR_0234|M.marinum_M TLTRVTETFDYHAAGELKNKLKYYERIGACKANAAGIEATLAKLRDRYAA MUL_4879|M.ulcerans_Agy99 TLTRVTETFDYHAAGELKNKLKYYERIGACKANAAGIEATLAKLRDRYAA Mb0091|M.bovis_AF2122/97 TLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYAR Rv0088|M.tuberculosis_H37Rv TLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYAR MAV_5243|M.avium_104 TRTRVTETFDYRDAGALKNRLKYYERMGFAKANASGIEATLAKLRDRYPG MAB_4338c|M.abscessus_ATCC_199 TSTRVTETFDFRNAGPIQSLLN-YKLPGFVKANAKGIEATLRRLQARYS- Mflv_2610|M.gilvum_PYR-GCK GATKVTETFDYSTA----KLPIVIELLGMQKKNADGIESTLLALANRYDV MSMEG_3417|M.smegmatis_MC2_155 ARTRITLTYDWSAVP--DAIRQHIGFPPFDPQHLDNSLKHLAGLAEKGSA TH_4053|M.thermoresistible__bu AGTRVTLTYDWSQVP--AADRRAMRFPPFPPEHLVNSLRHLKELAER--- Mvan_0758|M.vanbaalenii_PYR-1 GLTRVTLTYDWSAVP--ATLREHIAFPPFPVDHLHNSLANLAKLAAG--- *::* *:*: . : . * * MMAR_0234|M.marinum_M R------ MUL_4879|M.ulcerans_Agy99 R------ Mb0091|M.bovis_AF2122/97 GRA---- Rv0088|M.tuberculosis_H37Rv GRA---- MAV_5243|M.avium_104 ------- MAB_4338c|M.abscessus_ATCC_199 ------- Mflv_2610|M.gilvum_PYR-GCK H------ MSMEG_3417|M.smegmatis_MC2_155 EVDVSSG TH_4053|M.thermoresistible__bu --DVPR- Mvan_0758|M.vanbaalenii_PYR-1 -------