For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSTTKRYVVTRRIHAAPQDVFRVLADPARHKDTEPGDWVRDAIDPQPITDTGQIFAINMFLEQAGGHYVM HNRVTEYDEDRTIAWEPGLLDDAGNHSPGGWFWRYDLQPDGDATAVTLTYDWTDTPQSFADQIGGMPPFP EQFIAESLATLDRAVR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4744 | - | - | 100% (156) | hypothetical protein MSMEG_4744 |
M. smegmatis MC2 155 | MSMEG_3417 | - | 3e-25 | 42.66% (143) | hypothetical protein MSMEG_3417 |
M. smegmatis MC2 155 | MSMEG_0859 | - | 1e-11 | 35.20% (125) | transcriptional regulator, TetR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0146 | - | 1e-27 | 40.67% (150) | hypothetical protein Mflv_0146 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2457c | - | 2e-12 | 32.76% (116) | hypothetical protein MAB_2457c |
M. marinum M | MMAR_0253 | - | 3e-13 | 34.48% (116) | hypothetical protein MMAR_0253 |
M. avium 104 | MAV_5230 | - | 2e-11 | 34.78% (115) | hypothetical protein MAV_5230 |
M. thermoresistible (build 8) | TH_4053 | - | 2e-22 | 36.36% (165) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4861 | - | 2e-13 | 34.48% (116) | hypothetical protein MUL_4861 |
M. vanbaalenii PYR-1 | Mvan_0758 | - | 1e-29 | 42.11% (152) | hypothetical protein Mvan_0758 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0146|M.gilvum_PYR-GCK MSSAAMRGPTAMTENMIVTATVDAPVSAVFSVLADPAQHAAIDGTGWVRE Mvan_0758|M.vanbaalenii_PYR-1 MSPACDRGLTRMTETLIVDTIVDAPASTVFAVLADPATHAAIDGTGWVRE TH_4053|M.thermoresistible__bu MSDIQTTG-----TSLAVHTTVNAPARTVFDVLADPTTHARIDGTGWVRE MSMEG_4744|M.smegmatis_MC2_155 MSTT---------KRYVVTRRIHAAPQDVFRVLADPARHKDTEPGDWVRD MMAR_0253|M.marinum_M MVDTDAPLPDRSERVVSATREIAAGAAQIFELIADPSRQPDWDGNDNLAH MUL_4861|M.ulcerans_Agy99 MVDTDAPLPDRSERVVSATREIAAGAAQIFELIADPSRQPDWDGNDNLAH MAB_2457c|M.abscessus_ATCC_199 MTD--------DVRVVSASREVQASAAAIFELIADPARQREWDGNENLAE MAV_5230|M.avium_104 MSDT------EAERIVSATRVIAANAARIFELIADPARQPGWDGNDNLAS * . : * :* ::***: : : : Mflv_0146|M.gilvum_PYR-GCK GLDGEFLSRAGQLFRMAMYHDN--VPNGHYEMVNKVIAFERDREIGWEPG Mvan_0758|M.vanbaalenii_PYR-1 SLDGEPITRSGQMFRMAMYFANPAFADGHYEVANKVIAFEPDRAIGWEPG TH_4053|M.thermoresistible__bu PVDGARLTGAGQIFRMGMYHEN--HPHRHYEIANRVEVFDPPHAIAWQPG MSMEG_4744|M.smegmatis_MC2_155 AIDPQPITDTGQIFAINMFLEQ---AGGHYVMHNRVTEYDEDRTIAWEPG MMAR_0253|M.marinum_M CAAGQRVHRVGDVFRMTLTLGS--------VRENHIVEFTEARLIAWRPS MUL_4861|M.ulcerans_Agy99 CAAGQRVHRVGDVFRMTLTLGS--------VRENHIVEFTEARLIAWRPS MAB_2457c|M.abscessus_ATCC_199 AAAGQRAHAVGDVFVMTLTTGA--------DRENHIVEFEEARRIAWLPS MAV_5230|M.avium_104 AAPGQRVHRVGDVFKMTLTNGA--------VRENHVTEFVEGSVIAWRPA *::* : : *:: : *.* *. Mflv_0146|M.gilvum_PYR-GCK ---------QAGPDGVVGYGGWTWHYTLEPIG----PAQTRVTLTYDWSG Mvan_0758|M.vanbaalenii_PYR-1 ---------QAREDGTVEHGGWTWRYDLEAVG----PGLTRVTLTYDWSA TH_4053|M.thermoresistible__bu AEPRHIPGRGADATGPVEFGGWIWRYDLAPQHAPGAPAGTRVTLTYDWSQ MSMEG_4744|M.smegmatis_MC2_155 ---------LLDDAGNHSPGGWFWRYDLQPDG-----DATAVTLTYDWTD MMAR_0253|M.marinum_M ------------ELGKTPPG-HLWRWELTPIS----GTRTLVTHTYDWTE MUL_4861|M.ulcerans_Agy99 ------------ELGKTPPG-HLWRWELTPIS----GTRTLVTHTYDWTE MAB_2457c|M.abscessus_ATCC_199 ------------EVGKRPPG-HLWRWELRPLD----DDRTQVTHTYDWTN MAV_5230|M.avium_104 ------------EPGKQPPG-HLWRWELSPVN----AELTTVTHTYDWTA * * *:: * . * ** ****: Mflv_0146|M.gilvum_PYR-GCK VPAELREHIE-FPPFPDTHLKNSLDNLATLVVG----- Mvan_0758|M.vanbaalenii_PYR-1 VPATLREHIA-FPPFPVDHLHNSLANLAKLAAG----- TH_4053|M.thermoresistible__bu VPAADRRAMR-FPPFPPEHLVNSLRHLKELAERDVPR- MSMEG_4744|M.smegmatis_MC2_155 TPQSFADQIGGMPPFPEQFIAESLATLDRAVR------ MMAR_0253|M.marinum_M LSDPARFPRA--RATTTVQLRASLDRLAGHAEAAAAGD MUL_4861|M.ulcerans_Agy99 LSDPARFPRA--RATTTVQLRASLDRLAGHAEAAAAGD MAB_2457c|M.abscessus_ATCC_199 LTDEKRLVRA--RNTTSERLQASVDRLAALAESGA--- MAV_5230|M.avium_104 LTDPTRLQRA--RATTPEMLRESMDRLATLAQSGD--- . . : *: * .