For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSELITEAAASEPAGTVKIRIEGLKKSFGDLVVLDGIDTTVSHGEVVCVIGPSGSGKSTFLRCLNKLEDI TGGRVVVDEFDLTDPKIDLDKVRQHIGMVFQHFNLFPHMTVLENVTLAPLLTKKMDKAAAEKKALQLLDQ VGLAEKAGVKPATLSGGQKQRVAIARALAMNPSIMLFDEATSALDPEMVGDVLEVLRTLARGGMTMVVVT HEMGFAREVASRVIFMADGHIVEEGPPAEIFDNPKHPRLQEFLSKVL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3165 | - | - | 100% (257) | ABC transporter related |
M. gilvum PYR-GCK | Mflv_3968 | - | 3e-71 | 55.23% (239) | ABC transporter related |
M. gilvum PYR-GCK | Mflv_3581 | - | 6e-70 | 54.09% (257) | ABC transporter related |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2419c | cysA1 | 3e-37 | 37.60% (242) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. tuberculosis H37Rv | Rv2397c | cysA1 | 3e-37 | 37.60% (242) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. leprae Br4923 | MLBr_00669 | ftsE | 1e-33 | 37.73% (220) | putative cell division ATP-binding protein |
M. abscessus ATCC 19977 | MAB_3050 | - | 6e-72 | 53.57% (252) | putative glutamate ABC transporter, ATP-binding protein |
M. marinum M | MMAR_0060 | - | 5e-63 | 53.31% (242) | glutamine ABC transporter, ATP-binding protein |
M. avium 104 | MAV_0058 | - | 5e-68 | 54.62% (249) | ABC transporter, ATP-binding protein |
M. smegmatis MC2 155 | MSMEG_5316 | - | 1e-125 | 86.77% (257) | glutamine ABC transporter, ATP-binding protein |
M. thermoresistible (build 8) | TH_1784 | - | 7e-69 | 51.38% (253) | ABC transporter, ATP-binding protein GluA |
M. ulcerans Agy99 | MUL_3658 | cysA1 | 7e-39 | 39.66% (232) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. vanbaalenii PYR-1 | Mvan_4704 | - | 1e-129 | 89.11% (257) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb2419c|M.bovis_AF2122/97 -----------MT------YAIVVADATKRYG--DFVALDHVDFVVPTGS Rv2397c|M.tuberculosis_H37Rv -----------MT------YAIVVADATKRYG--DFVALDHVDFVVPTGS MUL_3658|M.ulcerans_Agy99 -----------MTGPGTGGHAIVVRDAFKQYG--DFVALDHVDFVVPAGS MSMEG_5316|M.smegmatis_MC2_155 ---MTQLVPESAAAEPEGTVKIRIENLKKAFG--DLVVLDGITTTVKKGE Mvan_4704|M.vanbaalenii_PYR-1 ---MNQLVTEAAAAEPVGTVKIRIEGLKKSFG--DHVVLDGISTTISKGE Mflv_3165|M.gilvum_PYR-GCK ---MSELITEAAASEPAGTVKIRIEGLKKSFG--DLVVLDGIDTTVSHGE MAB_3050|M.abscessus_ATCC_1997 MPVSTDTSTSGESSSAPSVPMIALEHVNKHFG--DLHVLKDITLEIPRGQ TH_1784|M.thermoresistible__bu -MDSAGADVAVADPAAEAVPMISMRGVNKYFG--SLHVLRDINLDVARGQ MMAR_0060|M.marinum_M ---------MTRQDAGRQPVCLAARSIHQTLG--GSVVLRGVDLEVPAGT MAV_0058|M.avium_104 ---------MS-NPASRASVSLACKDIHQTLN--GNAVLRGVDLDTPAGS MLBr_00669|M.leprae_Br4923 --------------------MITLDHVSKKYKSLARPALDNVNVKIDKGE : : .* : * Mb2419c|M.bovis_AF2122/97 LTALLGPSGSGKSTLLRTIAGLDQPDTGTITINGRDVTRVP-----PQRR Rv2397c|M.tuberculosis_H37Rv LTALLGPSGSGKSTLLRTIAGLDQPDTGTITINGRDVTRVP-----PQRR MUL_3658|M.ulcerans_Agy99 LTALLGPSGSGKSTLLRTIAGLDQPDSGNITINGRDVTRVP-----PQRR MSMEG_5316|M.smegmatis_MC2_155 VVCVIGPSGSGKSTFLRCLNKLEDITDGKVVVDEFDLTDRKV-DLDKVRQ Mvan_4704|M.vanbaalenii_PYR-1 VVCVIGPSGSGKSTFLRCLNKLEDISGGKVVVDEFDLTDPKI-DLDKVRQ Mflv_3165|M.gilvum_PYR-GCK VVCVIGPSGSGKSTFLRCLNKLEDITGGRVVVDEFDLTDPKI-DLDKVRQ MAB_3050|M.abscessus_ATCC_1997 VVVILGPSGSGKSTLCRTINRLEPIDGGTIRIDGAILPEEGR-ALASLRA TH_1784|M.thermoresistible__bu VVVVLGPSGSGKSTLCRTLNRLEPIDSGAISIDGVALPAEGR-ELARLRA MMAR_0060|M.marinum_M TAAVIGPSGSGKSTLLRTLNRLHEPDSGDILLDGRSVLRD---NPNDLRQ MAV_0058|M.avium_104 TVAVIGPSGSGKSTLLRTLNRLYEPDRGDILLDGRSVLHD---DPDQLRQ MLBr_00669|M.leprae_Br4923 FVFLIGPSGSGKSTFMRLLLGAETPTSGDVRVSKFHVNKLPGRHIPRLRQ . ::*********: * : * : :. : * Mb2419c|M.bovis_AF2122/97 GIGFVFQHYAAFKHLTVRDNVAFG-LKIRKRPKAEIKAKVDNLLQVVGLS Rv2397c|M.tuberculosis_H37Rv GIGFVFQHYAAFKHLTVRDNVAFG-LKIRKRPKAEIKAKVDNLLQVVGLS MUL_3658|M.ulcerans_Agy99 GIGFVFQHYAAFKHLTVRDNVAYG-LKIRKRPKAEIRDKVDNLLEVVGLS MSMEG_5316|M.smegmatis_MC2_155 RIGMVFQHFNLFPHMTVIDNITLAPLLTKKMDKPAAEKRAMELLGQVGLA Mvan_4704|M.vanbaalenii_PYR-1 RIGMVFQHFNLFPHMTVIENITLAPLLTKKMDKAAAEKKAMELLGQVGLA Mflv_3165|M.gilvum_PYR-GCK HIGMVFQHFNLFPHMTVLENVTLAPLLTKKMDKAAAEKKALQLLDQVGLA MAB_3050|M.abscessus_ATCC_1997 EVGMVFQSFNLFSHKTILDNVTLAPIKVRKHNKETARKRAIELLERVGIA TH_1784|M.thermoresistible__bu DVGMVFQQFNLFAHKTIVDNVALGPMKVRKTPREQARAEAMALLERVGVA MMAR_0060|M.marinum_M RIGMVFQHFNLFPHRNVVDNVTLAPRKLRGLSNEEARMLALDQLDRVGLK MAV_0058|M.avium_104 RIGMVFQHFNLFPHRTVLDNVALAPRKLRRLPAEAARELALTQLDRVGLK MLBr_00669|M.leprae_Br4923 VIGCVFQDFRLLQQKTVYENVAFALEVIGRRS-DAINQVVPDVLETVGLS :* *** : : : .: :*:: . . . * **: Mb2419c|M.bovis_AF2122/97 GFQSRYPNQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREELRA Rv2397c|M.tuberculosis_H37Rv GFQSRYPNQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREELRA MUL_3658|M.ulcerans_Agy99 GFHGRYPDQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREDLRA MSMEG_5316|M.smegmatis_MC2_155 EKAHVKPATLSGGQKQRVAIARALAMNPSIMLFDEATSALDPEMVGDVLE Mvan_4704|M.vanbaalenii_PYR-1 EKAHVKPATLSGGQKQRVAIARALAMNPSIMLFDEATSALDPEMVGDVLQ Mflv_3165|M.gilvum_PYR-GCK EKAGVKPATLSGGQKQRVAIARALAMNPSIMLFDEATSALDPEMVGDVLE MAB_3050|M.abscessus_ATCC_1997 SQKDKYPAQLSGGQQQRVAIARSLAMGPKVMLFDEPTSALDPEMVNEVLD TH_1784|M.thermoresistible__bu DQADKYPAQLSGGQQQRVAIARSLAMNPKVMLFDEPTSALDPEMINEVLA MMAR_0060|M.marinum_M HKANARPDMLSGGQQQRVAIARALAMAPQVMFFDEATSALDPEMVKGILA MAV_0058|M.avium_104 HKAGARPATLSGGQQQRVAIARALAMSPQVMFFDEATSALDPEMVKGILQ MLBr_00669|M.leprae_Br4923 GKANRLPDELSGGEQQRVAIARAFVNRPLVLLADEPTGNLDPDTSKDIMD * ****::**:*:**::. * ::: **. . **.. : Mb2419c|M.bovis_AF2122/97 WLRRLHDEVHVTTVLVTHDQAEALDVADRIAVLHKGRIEQVGSPTDVYDA Rv2397c|M.tuberculosis_H37Rv WLRRLHDEVHVTTVLVTHDQAEALDVADRIAVLHKGRIEQVGSPTDVYDA MUL_3658|M.ulcerans_Agy99 WLRRLHDEVHVTTVLVTHDQAEALDVADRIAVLNSGRIEQVGSPTEVYDA MSMEG_5316|M.smegmatis_MC2_155 VLRDLAEGG-MTMVVVTHEMGFAREVASRVMFMADGNIVEDDTPAEIFDN Mvan_4704|M.vanbaalenii_PYR-1 VLRDLAEGG-MTMVVVTHEMGFAREVASRVVFMADGDIVEDAPPAELFDN Mflv_3165|M.gilvum_PYR-GCK VLRTLARGG-MTMVVVTHEMGFAREVASRVIFMADGHIVEEGPPAEIFDN MAB_3050|M.abscessus_ATCC_1997 VMVSLAKEG-MTMLVVTHEMGFARKAADRIIFMADGAIVEDSDPESFFTN TH_1784|M.thermoresistible__bu VMSALAADG-MTMLVVTHEMGFARRASDRVVFMSDGAIVEDAEPARFFED MMAR_0060|M.marinum_M LIADLGADG-MTMVVVTHEMGFARSTSDAVVFMDHGTVVEAGPPEQLFEA MAV_0058|M.avium_104 LIADLGAEG-MTMVVVTHEMGFARSASDAVIFMDHGKVVESGPPEQIFEA MLBr_00669|M.leprae_Br4923 LLERINRTG-TTVLMATHDHHIVDSMRQRVVELSLGRLVRDEWCG-IYGM : : * ::.**: . . : : * : . .: Mb2419c|M.bovis_AF2122/97 PANAFVMSFLGAVSTLNGSLVRPHDIRVGRTPNMAVAAADGTAGSTGVLR Rv2397c|M.tuberculosis_H37Rv PANAFVMSFLGAVSTLNGSLVRPHDIRVGRTPNMAVAAADGTAGSTGVLR MUL_3658|M.ulcerans_Agy99 PTNAFVMSFLGAVSALNGALVRPHDIRVGRTPEMAVAAADGTGESTGVTR MSMEG_5316|M.smegmatis_MC2_155 PKHPRLQDFLSKVL------------------------------------ Mvan_4704|M.vanbaalenii_PYR-1 PKHPRLQDFLAKVL------------------------------------ Mflv_3165|M.gilvum_PYR-GCK PKHPRLQEFLSKVL------------------------------------ MAB_3050|M.abscessus_ATCC_1997 PKSERAKDFLGKILGH---------------------------------- TH_1784|M.thermoresistible__bu PQTDRARDFLGKILHH---------------------------------- MMAR_0060|M.marinum_M ARTERLQRFLAQVL------------------------------------ MAV_0058|M.avium_104 AETERLQRFLSQVL------------------------------------ MLBr_00669|M.leprae_Br4923 DR------------------------------------------------ Mb2419c|M.bovis_AF2122/97 AVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREGDTVYVRA Rv2397c|M.tuberculosis_H37Rv AVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREGDTVYVRA MUL_3658|M.ulcerans_Agy99 AVVDRIVVLGFEVRVELTSAATGGAFTAQITRGDAEALALQEGDTVYVRA MSMEG_5316|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_4704|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_3165|M.gilvum_PYR-GCK -------------------------------------------------- MAB_3050|M.abscessus_ATCC_1997 -------------------------------------------------- TH_1784|M.thermoresistible__bu -------------------------------------------------- MMAR_0060|M.marinum_M -------------------------------------------------- MAV_0058|M.avium_104 -------------------------------------------------- MLBr_00669|M.leprae_Br4923 -------------------------------------------------- Mb2419c|M.bovis_AF2122/97 TRVPPIAGGVSGVDDAGVERVKVTST------ Rv2397c|M.tuberculosis_H37Rv TRVPPIAGGVSGVDDAGVERVKVTST------ MUL_3658|M.ulcerans_Agy99 TRVPPIAGAAPAVPDDGAGSTPRAAQIGVGGQ MSMEG_5316|M.smegmatis_MC2_155 -------------------------------- Mvan_4704|M.vanbaalenii_PYR-1 -------------------------------- Mflv_3165|M.gilvum_PYR-GCK -------------------------------- MAB_3050|M.abscessus_ATCC_1997 -------------------------------- TH_1784|M.thermoresistible__bu -------------------------------- MMAR_0060|M.marinum_M -------------------------------- MAV_0058|M.avium_104 -------------------------------- MLBr_00669|M.leprae_Br4923 --------------------------------