For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAIRVALIGTGNCGSLALRQLIEDARFDLVGVWVSTPAKVGKDAGELARLDVTTGIAATDDLDALVATRP DCVVYCAMGDVRPREALADVRKLLEAGINVVGSSPGFLSYPWGVIGDHTIEKVQAAARQGNSSLFITGVD PGFVTDLLPLALASTCQHIEQIRTMEIADYATYDGATVMFDVMGFGNEIGDLPFLYQPGMLSAAWGVGIR QLAAGLGVEVEEIRDSVEQEPAPEDFEVAVGTIRKGTVAAVRFLIEGLVDGRPAIVVEHITRLRGDLRPD WAQPAQEGGSYRVEITGEPSYVMDIRPTSRNGDHNYAAILAAAGRIVNAIPEVVAAEAGIRTTLDLPLVT GNGTYRPA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3282 | - | - | 100% (358) | dihydrodipicolinate reductase |
M. gilvum PYR-GCK | Mflv_1824 | - | e-121 | 58.31% (355) | dihydrodipicolinate reductase |
M. gilvum PYR-GCK | Mflv_0926 | - | 9e-65 | 39.37% (348) | hypothetical protein Mflv_0926 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0949c | - | 1e-125 | 62.01% (358) | hypothetical protein Mb0949c |
M. tuberculosis H37Rv | Rv0926c | - | 1e-125 | 62.01% (358) | hypothetical protein Rv0926c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4633 | - | 1e-121 | 60.57% (350) | hypothetical protein MAB_4633 |
M. marinum M | MMAR_0386 | - | 1e-139 | 67.23% (357) | hypothetical protein MMAR_0386 |
M. avium 104 | MAV_5137 | - | 1e-135 | 65.19% (362) | homoserine dehydrogenase |
M. smegmatis MC2 155 | MSMEG_5586 | - | 1e-128 | 61.41% (355) | hypothetical protein MSMEG_5586 |
M. thermoresistible (build 8) | TH_0599 | - | 1e-131 | 62.18% (357) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4353 | - | 6e-38 | 32.42% (364) | hypothetical protein MUL_4353 |
M. vanbaalenii PYR-1 | Mvan_3001 | - | 0.0 | 87.64% (356) | dihydrodipicolinate reductase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3282|M.gilvum_PYR-GCK ----MAIRVALIGTGNCGSLALRQLIEDARFDLVGVWVSTPAKVGKDAGE Mvan_3001|M.vanbaalenii_PYR-1 ----MAIRVALIGTGNCGSLALRQLIEDPRFALTGVWVSSQEKVGRDAGE MMAR_0386|M.marinum_M ----MAIRVAHVGTGNVGRLALSELVTNPAFELTAVCVSTPEKVGRDAGD MAV_5137|M.avium_104 ----MAIRVAHVGTGNVGGLALAELITNPRYELTGVCVSTPEKVGKDAGE MSMEG_5586|M.smegmatis_MC2_155 ----MAIRVAAIGTGNVGRHALRQLITNPAYELTAVWVSSPEKAGKDAGD TH_0599|M.thermoresistible__bu ----VTIRTAVVGTGNVGRHALAQVIADPRFDLTAVWVSSAAKAGLDAGE Mb0949c|M.bovis_AF2122/97 ----MAIPVVQLGTGNVGVHSLRALIADPEFELTGVWVSSDAKAGKDAAE Rv0926c|M.tuberculosis_H37Rv ----MAIPVVQLGTGNVGVHSLRALIADPEFELTGVWVSSDAKAGKDAAE MAB_4633|M.abscessus_ATCC_1997 ---MTKTRVAVWGTGNVGQHALAGVITDPSMELVGVWVSGSNKAGKDAGA MUL_4353|M.ulcerans_Agy99 MSGPAKLRVIQWATGGVGKAAIECILNHPQLELAGCWVHSAAKHGLDVGT . .**. * :: :: .. *.. * * * *.. Mflv_3282|M.gilvum_PYR-GCK LARLDVTT----GIAATDDLDALVATRPDCVVYCAMGDVRPREALADVRK Mvan_3001|M.vanbaalenii_PYR-1 LARLDVTT----GVAAVDDMAAIIDAKPDCAVYCAMGDVRPKEALADVRG MMAR_0386|M.marinum_M LAGVGIET----GIAAINDLDAVLATAPECVVYCAMGDTRLPDAMADVMR MAV_5137|M.avium_104 LCGVGLDAGVVTGVAAVGDLDAVIAAKPECVVYCAMADTRLPEAMADVMR MSMEG_5586|M.smegmatis_MC2_155 LAGLEVTT----GIKATDSLDEVLATEPECAVYTAMADNRLPDALEDYRR TH_0599|M.thermoresistible__bu LAGLDVST----GIRATTDLDELLATGPECVVYTAMADNRLNEALDDYRR Mb0949c|M.bovis_AF2122/97 LAGLADST----GVRASTDLNAVLATGPRCAVYNAMADNRLPEALEDYRR Rv0926c|M.tuberculosis_H37Rv LAGLADST----GVRASTDLNAVLATGPRCAVYNAMADNRLPEALEDYRR MAB_4633|M.abscessus_ATCC_1997 LAGLDILT----GITATTDAAQILALRPDCVVYTAMTDNRLMEALKDLTD MUL_4353|M.ulcerans_Agy99 IIGAARFG-----VTATNDVDELLALDADCVMYSPQVADE-----QDVKA : : * . :: . *.:* . . * Mflv_3282|M.gilvum_PYR-GCK LLEAGINVVGSSPGFLSYPWGVIGDHTIEKVQAAARQGNSSLFITGVDPG Mvan_3001|M.vanbaalenii_PYR-1 LLEAGINVVGSSPGFLAYPWGVIPDRAIERVESAARQGNTSLFITGVDPG MMAR_0386|M.marinum_M ILAAGSNVVGSSPGLLQYPWGVIPDKYIARVQRAAEQGNSSIFITGVDPG MAV_5137|M.avium_104 ILAAGINVVGSSPGLLQYPWGVMPEKYIARVEDAARQGNSSIFISGVDPG MSMEG_5586|M.smegmatis_MC2_155 ILAAGVNVVGSSAVFLQYPWQVLPEELVKPIEDAAHAGGASLFVNGIDPG TH_0599|M.thermoresistible__bu ILAAGSNVVGSSAVFLQHPWQVLPAELIAPIEEAATAGNASLYVNGIDPG Mb0949c|M.bovis_AF2122/97 ILAAGINIVGSGPVFLQYPWQVIPDEIIKPLQDAARAGNSSLYVNGIDPG Rv0926c|M.tuberculosis_H37Rv ILAAGINIVGSGPVFLQYPWQVIPDEIIKPLQDAARAGNSSLYVNGIDPG MAB_4633|M.abscessus_ATCC_1997 LLSAGINVAASAPVFLQYPWGVLPENMLTPIENAAREGNSSIFAGGIDPG MUL_4353|M.ulcerans_Agy99 ILRSGKNVFTP----VGWVYPDLSKPRVKAVADAAVAGGVTLHGSGIHPG :* :* *: . : : : : : ** *. ::. *:.** Mflv_3282|M.gilvum_PYR-GCK FVTDLLPLALASTCQHIEQIRTMEIADYATYDGATVMFDVMGFGNEIGDL Mvan_3001|M.vanbaalenii_PYR-1 FVTDLLPLALASTCQSVSQVRTMEIADYATYDGATVMFDVMGFGNEIGDL MMAR_0386|M.marinum_M FINDLLPFALAGTCQRIEQVRCMEIHDYASYDGAEVMH-YMGFGRSLDEV MAV_5137|M.avium_104 FANDLIPLALAGTCQRVEQVRCMEIHDYASYNGAEVMG-YMGFGRPLDEI MSMEG_5586|M.smegmatis_MC2_155 FANDLLPLALAGTCQQIEQIRCMEIVDYATYDSATVMLDVMGFGKSLDET TH_0599|M.thermoresistible__bu FANDQLPLALAGACQHIEQIRCLEIVDYATYDSATVLFDVMGFGKPLDEI Mb0949c|M.bovis_AF2122/97 FANDLLPMALAGTCESIEQIRCMEIVDYATYDSAVVMFDVMGFGKPMDQI Rv0926c|M.tuberculosis_H37Rv FANDLLPMALAGTCESIEQIRCMEIVDYATYDSAVVMFDVMGFGKPMDQI MAB_4633|M.abscessus_ATCC_1997 FANDLLPLALMGTCQRIDQVRCIEIVDYATYDSATVMFDVMGFGKPMEET MUL_4353|M.ulcerans_Agy99 GITERFPLMVSSLSSAITHVRAEEFSDIRTYNAPDVVRDIMGFGVPHAQA .: :*: : . .. : ::* *: * :*:.. *: **** : Mflv_3282|M.gilvum_PYR-GCK PFLYQPGMLSAAWGVGIRQLAAGLGVEVE-EIRDSVEQEPAPEDFEVAVG Mvan_3001|M.vanbaalenii_PYR-1 PFLYQPGMLSAAWGVGVRQLAAGLGVEVD-EIRDSVEQEPAPEDFDVAVG MMAR_0386|M.marinum_M PMLLQPGVLGIAWGTAIRQLAAGLGIEVD-EITESYQREPAPEDFEIAVG MAV_5137|M.avium_104 PMLLQPGVLSIAWGTAIRQLAAGLGIQVD-EITESYQREPAPEDFDIAVG MSMEG_5586|M.smegmatis_MC2_155 PMLLQPGVLSLAWGSVVRQLAAGLGIELD-AVTEEHTRVPAPEDFDIAAG TH_0599|M.thermoresistible__bu PLLLQPGVLTMAWGSVVRQLAAGLGIELD-EVREQYVREPAPEDFDIAAG Mb0949c|M.bovis_AF2122/97 PMLLQPGVLSLAWGSVVRQLAAGLGISLD-GVEEMYVREPAPEAFNIASG Rv0926c|M.tuberculosis_H37Rv PMLLQPGVLSLAWGSVVRQLAAGLGISLD-GVEEMYVREPAPEAFNIASG MAB_4633|M.abscessus_ATCC_1997 PMLLQPGVLSLAWGSVVRQLAAGLGVELD-EVTEVYEKLSAPEDFDISSG MUL_4353|M.ulcerans_Agy99 MQGPMAALLESGFKMSVRMIANHMGFHIDPMIRATHEIAVATSDIASDVL ..:* .: :* :* :*. :: : *.. : Mflv_3282|M.gilvum_PYR-GCK TIRKGTVAAVRFLIEGLVDGRPAIVVEHITRL-RGDLRPDWAQPAQEGGS Mvan_3001|M.vanbaalenii_PYR-1 TIKKGTVAAVRFLIEGLVDGAPAIVVEHITRL-RGDLRPDWAQPAQEGGS MMAR_0386|M.marinum_M PVAKGTQAVLQFEIRGMVDGQAAIVIEHITRL-RPDLRPDWPQPASGGGS MAV_5137|M.avium_104 RVAKGTLAVLQFEIRGMVNGHPAIVIEHVTRL-RPDLRPDLPQPAAGDGS MSMEG_5586|M.smegmatis_MC2_155 HISEGTTAAMRFEVRGMVDGKPAVVLEHVTRL-RDDLCPEWPQPAQEGGS TH_0599|M.thermoresistible__bu HIPQGSAAALRFEVQGMVDGHPAVVLEHVTRL-RDDLRPDWPQPAQPGGS Mb0949c|M.bovis_AF2122/97 HIPKGSAAALRFEVLGLVDGVPAVVLEHVTRL-RADLCPEWPQPAQPGGS Rv0926c|M.tuberculosis_H37Rv HIPKGSAAALRFEVLGLVDGVPAVVLEHVTRL-RADLCPEWPQPAQPGGS MAB_4633|M.abscessus_ATCC_1997 HIPAGTMAALHFEVRGIKDGRAVTVLEHFTRL-REDLAPNWPQPAHEGGT MUL_4353|M.ulcerans_Agy99 PIAADTVAGRKFRWQTLADGKPVITAAVNWLMGQADMHPDWSFGER-GER : .: * :* : :* .. . : : *: *: . . Mflv_3282|M.gilvum_PYR-GCK YRVEITGEPSYVMDIR----PTSRNGDHNYAAILAAAGRIVNAIPEVVAA Mvan_3001|M.vanbaalenii_PYR-1 YRVEITGEPSYVMDIC----PTSNNGDHNYAAILAAAGRIVNAIPDVVAA MMAR_0386|M.marinum_M YRIEITGEPSYAVDIV----PSSRNGDHNHAAIVGAAGRIVNAIPAVLTA MAV_5137|M.avium_104 YRVEITGEPSYAVDIV----PSSRKGDHNHAAIAGAAGRIVNAIPAVIAA MSMEG_5586|M.smegmatis_MC2_155 YRVEVTGEPSYALDLC----LSSPYGDHNHAGLVATAARVVNAIPAVFAA TH_0599|M.thermoresistible__bu YRVEVTGEPCYTLDLR----LSSPHGDHNHAGLVATAARVVNAIPPVVAA Mb0949c|M.bovis_AF2122/97 YRIEISGEPCYAMDIC----LSSRHGDHNHAGLVATAMRIVNAIPAVVAA Rv0926c|M.tuberculosis_H37Rv YRIEISGEPCYAMDIC----LSSRHGDHNHAGLVATAMRIVNAIPAVVAA MAB_4633|M.abscessus_ATCC_1997 YRVEITGEPSYLLDLG----SFSARGDHNYANLIATAMRVVNAVPAVVAA MUL_4353|M.ulcerans_Agy99 FEIEITGNPSVSLVFKGLQPTSITEGLQRNPGVVATANHCANAIPVVCAA :.:*::*:*. : : * :. . : .:* : .**:* * :* Mflv_3282|M.gilvum_PYR-GCK EAGIRTTLDLPLVTGNGTYRPA-------- Mvan_3001|M.vanbaalenii_PYR-1 EPGIRSTLDLPFGTGRGTYRAP-------- MMAR_0386|M.marinum_M TPGIRTTLDLPLITGKGLYTP--MVSN--- MAV_5137|M.avium_104 PPGIRTTLDLPLVTGKGLYAPSTLVTT--- MSMEG_5586|M.smegmatis_MC2_155 PPGIRTTLDMPLITGKGLYAAR-------- TH_0599|M.thermoresistible__bu PAGIRTTLDLPWVSGTGRYLPPDRPEGTIR Mb0949c|M.bovis_AF2122/97 EPGIRTTLDLPLITGEGRYAAA-------- Rv0926c|M.tuberculosis_H37Rv EPGIRTTLDLPLITGEGRYAAA-------- MAB_4633|M.abscessus_ATCC_1997 EAGIRTTLDLPLITGKGRAV---------- MUL_4353|M.ulcerans_Agy99 DPGIATYLDLPLFAGRPARASRGLER---- .** : **:* :*