For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVTHQRDSTRTLFGHPIGLTNLFGVELWERFSFYGMLTILGYYLYYSVAEGGLGLPQATATGIVGAYGGL VYLSTVLGGWIADRVLGMERTVFYGGVVVMLGHIALAVLPGLAGVGAGLVLVALGSGALKANASSLLGTL YAKGDPRADGGFTLFYLGINLGAFIGPLITGLLQTRVGFHYGFGAAAIGMALGLLQYVAFRRNLGEHGRE VPNPLPRGAIGKTASVFAVVVLVVAAAVALRLVTLENLSQVTTGVIVIASVAYFVVLFRSPKVTAPERIR VRAFIPLFVANAVFWSLFQQIFTVLAVYSDERMNWSIFGWTAPSNWIGSIEPIWIIALSPLFALMWTRLG KRAPTTPRKFAYGVIGMGVAFLCFVPLAGVSAVPALVVLAILGVFAVSELLLSPIGLSVTTKLAPQAFRA QMMALYFFSVGLGTSMSGVLAGYYDTSREAAYFGVLGAIAVVAGVVVFAISPWISRQMEGVH
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2746 | - | - | 100% (482) | amino acid/peptide transporter |
M. gilvum PYR-GCK | Mflv_1475 | - | 1e-06 | 28.83% (163) | major facilitator transporter |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1660 | - | 5e-05 | 22.83% (403) | drug efflux membrane protein |
M. tuberculosis H37Rv | Rv1634 | - | 9e-05 | 22.83% (403) | drug efflux membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1338 | - | 4e-07 | 30.26% (152) | putative membrane efflux protein |
M. marinum M | MMAR_0690 | - | 1e-05 | 29.09% (220) | putative transport protein |
M. avium 104 | MAV_3702 | - | 1e-07 | 23.87% (243) | transporter, major facilitator family protein |
M. smegmatis MC2 155 | MSMEG_3533 | - | 0.0 | 78.79% (481) | di-/tripeptide transporter |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_3792 | - | 0.0 | 86.93% (482) | amino acid/peptide transporter |
CLUSTAL 2.0.9 multiple sequence alignment Mb1660|M.bovis_AF2122/97 ------------------------------------MTETASETGSWREL Rv1634|M.tuberculosis_H37Rv ------------------------------------MTETASETGSWREL Mflv_2746|M.gilvum_PYR-GCK --------------------------------------MVTHQRDSTRTL Mvan_3792|M.vanbaalenii_PYR-1 --------------------------------------MTIREQGDRRTF MSMEG_3533|M.smegmatis_MC2_155 -MPQNTLHTAGFPFAHRIAGFSALPADALTERGKVTPMGEAHDTQARRTV MMAR_0690|M.marinum_M ------------------------------------------MTDSSRRV MAB_1338|M.abscessus_ATCC_1997 ----------------------------------------MTDLANDEQL MAV_3702|M.avium_104 MTALNDSERAVQNWTSARPDRPAPVRSTPPAETAPKPAAETAVKRTSKYY . Mb1660|M.bovis_AF2122/97 LSRYLGTS----IVLAGGVALYATNEFLTISLLPSTIADIGGSRLYAWVT Rv1634|M.tuberculosis_H37Rv LSRYLGTS----IVLAGGVALYATNEFLTISLLPSTIADIGGSRLYAWVT Mflv_2746|M.gilvum_PYR-GCK FGHPIGLTNLFGVELWERFSFYGMLTILGYYLYYSVAEGGLGLPQATATG Mvan_3792|M.vanbaalenii_PYR-1 FGHPVGLTNLFGVELWERFSFYGMLTILGYYLYYSVTDGGLGLPQSTATG MSMEG_3533|M.smegmatis_MC2_155 FGHPMGLVNLFGVELWERFSFYGMLTILGYYLYYTATDGGLGLPQSTATG MMAR_0690|M.marinum_M VLAAVGFT-----------FFIDMLVYGIVVPVLPRLAKPAGLEFLGVGV MAB_1338|M.abscessus_ATCC_1997 TVRHDRRITPTPVSAWNRMRYWVIAHAVDDFYQGLVPAAIPFFVLERHYS MAV_3702|M.avium_104 PAWLPSRRFIAAVIAIGGMQLLATMDSTVAIVALPRIQNELSLSDAGRSW Mb1660|M.bovis_AF2122/97 TLYLVGSVVAATTVNTMLLR---VGARSSYLMGLAVFGLASLVCAAAPSM Rv1634|M.tuberculosis_H37Rv TLYLVGSVVAATTVNTMLLR---VGARSSYLMGLAVFGLASLVCAAAPSM Mflv_2746|M.gilvum_PYR-GCK IVGAYGGLVYLSTVLGGWIADRVLGMERTVFYGGVVVMLGHIALAVLPGL Mvan_3792|M.vanbaalenii_PYR-1 IVGAYGGLVYLSTVLGGWIADRLLGMERTVFYGGVVVMLGHIALAILPGL MSMEG_3533|M.smegmatis_MC2_155 IVGAYGGLVYLSTVLGGWIADRVLGMERTVFYGGVVVMCGHIALAVLPGL MMAR_0690|M.marinum_M VFACYGLAYFVLTPVAGWLIDR-RGSRSVFLSGAIILMLATLAFGYASSP MAB_1338|M.abscessus_ATCC_1997 YAAASG--LALAATLGSALPQPLLGLIADRWRLLWMAPAGLAAAGIGAGL MAV_3702|M.avium_104 VITAYVLTFGGLMLLGGRLGDT-IGRKRTFIVGVALFTISSVLCAVAWDE : * : . . . Mb1660|M.bovis_AF2122/97 QILVAGRTLQG---IAGGLLAGLGYALINSTLPKS--LWTRGSALVSAMW Rv1634|M.tuberculosis_H37Rv QILVAGRTLQG---IAGGLLAGLGYALINSTLPKS--LWTRGSALVSAMW Mflv_2746|M.gilvum_PYR-GCK AGVGAGLVLVA---LGSGALKANASSLLGTLYAKGDPRADGGFTLFYLGI Mvan_3792|M.vanbaalenii_PYR-1 TGVGVGLVLVA---LGSGALKANASSLLGTLYDKGDARADGGFTLFYLGI MSMEG_3533|M.smegmatis_MC2_155 AGVGIGLVLVA---LGSGALKANASSLLGTLYDKDDPRCDGGFTLFYLGV MMAR_0690|M.marinum_M VGLVTCRVLQG---GAAAATWVAGYATLVEIFPRE--QRGRAVGLASIGT MAB_1338|M.abscessus_ATCC_1997 AGLVPGYWLVWTMLLVSGLGVAAFHPAAGRDARRDAGDSATAMSLFAAGG MAV_3702|M.avium_104 ATMVIARLSQG---VGSAIASPTGLALVATTFPKG-PARNFATAVFAAMT : .. . : . : Mb1660|M.bovis_AF2122/97 GVATLIGPATGGLFAQLGLWRWAFGVMTL---LTALMAMLVPVALGAGRV Rv1634|M.tuberculosis_H37Rv GVATLIGPATGGLFAQLGLWRWAFGVMTL---LTALMAMLVPVALGAGGV Mflv_2746|M.gilvum_PYR-GCK NLGAFIGPLITGLLQTRVGFHYGFGAAAIGMALGLLQYVAFRRNLGEHGR Mvan_3792|M.vanbaalenii_PYR-1 NLGAFIGPLITGLLQTRIGFHYGFGAAAIGMALGLIQYVVFRRNLGEHGR MSMEG_3533|M.smegmatis_MC2_155 NLGAFVGPLVTGILQTRIGFHYGFGAAAIGMALGLVQYVVYRRNLGTHGR MMAR_0690|M.marinum_M ALGALLGPALGGLAYEASGPHAPFLGAAG---LSALAVAALAASLPQAAG MAB_1338|M.abscessus_ATCC_1997 SVGFFLAPALVTPALVSAGLGATAWFIPP---AVIMGFVLWRYQLRQGSA MAV_3702|M.avium_104 AVGSVMGLVVGGALTEVSWRLAFLVNVPIGLVMMYLARTALRETNRERMK :. .:. . : Mb1660|M.bovis_AF2122/97 GPGGETPVGSTHKVP--VWSLL-----LMGAAALAISVAALPNYLVQTAG Rv1634|M.tuberculosis_H37Rv GPGGETPVGSTHKVP--VWSLL-----LMGAAALAISVAALPNYLVQTAG Mflv_2746|M.gilvum_PYR-GCK EVPNPLPRGAIGKTASVFAVVV-----LVVAAAVALRLVTLENLSQVTTG Mvan_3792|M.vanbaalenii_PYR-1 QVPNPLPRSAIGKTAGVFVAVI-----VVIAAAVALKLVTLANLSQVTTG MSMEG_3533|M.smegmatis_MC2_155 IVPNPLPSSSFGKVAAFATALV-----IAAVALFVSGVVTLANLSQATTV MMAR_0690|M.marinum_M GQASGPGMWSGERAFPGLAVPW-----LVAGLAVGLALGAVEATLPIDLV MAB_1338|M.abscessus_ATCC_1997 NSVDRQLTGNDRWGAFSILVAV-----EVVRSAVYFGMNTFIALYLIDHL MAV_3702|M.avium_104 LDATGAVLATLACTAAVFAFSMGPEKGWISLTTISSGVVALGAALAFVIV . : :. Mb1660|M.bovis_AF2122/97 LLAAAALLVAVFVVVDWRIHAAVLP-----PSVFGSGPLKWIYLTMSVQM Rv1634|M.tuberculosis_H37Rv LLAAAALLVAVFVVVDWRIHAAVLP-----PSVFGSGPLKWIYLTMSVQM Mflv_2746|M.gilvum_PYR-GCK VIVIASVAYFVVLFRSPKVTAPERIRVRAFIPLFVANAVFWSLFQQIFTV Mvan_3792|M.vanbaalenii_PYR-1 VIIVASIGYFLIMLGSDKVSGPERVRLRAFIPLFVANAVFWSLFQQIFTV MSMEG_3533|M.smegmatis_MC2_155 VIALASVAYFAVFLTSSKVSTLERTRVRAFIPLFVANAVFWSLFQQIFTV MMAR_0690|M.marinum_M ARFDASGVTVGLLFALTTVAFIVTS------------------------- MAB_1338|M.abscessus_ATCC_1997 DVSAAVGGVGLAMFLGG--------------------------------- MAV_3702|M.avium_104 ERTAENPVVPFDLFRDRNRLVTFIAIFLAGGVMFTLTVCIGLYVQDILGY .. Mb1660|M.bovis_AF2122/97 IAAMVDTYV--PLFG-----QRLGHLTPVAAGFLGAALAVGWTVGEVASA Rv1634|M.tuberculosis_H37Rv IAAMVDTYV--PLFG-----QRLGHLTPVAAGFLGAALAVGWTVGEVASA Mflv_2746|M.gilvum_PYR-GCK LAVYSDERMNWSIFGWTAPSNWIGSIEPIWIIALSPLFALMWTR--LGKR Mvan_3792|M.vanbaalenii_PYR-1 LAVYSDERMNWSIFGWTAPSNWIGSIEPIWIIVLSPLFALMWTR--LGKR MSMEG_3533|M.smegmatis_MC2_155 LAVYSDERMNWSVFGWTAPSNWIGSIEPVWIIVLSPVFAWLWTR--LGDR MMAR_0690|M.marinum_M --------------------QYAGRLS--DAGRRAPVLAAGWVTLGVALA MAB_1338|M.abscessus_ATCC_1997 --------------------GVIGTLLGGRISDRLGMIATIRVG-----S MAV_3702|M.avium_104 SALRAGVGFIPFVIAMG---IGLGVSSQLVARFSPRVLTIAGGYLLVLAM * :: Mb1660|M.bovis_AF2122/97 SLNSARVIGHVVAAAPLVMASGLALGAVT---QRADAPVGIIALWALALL Rv1634|M.tuberculosis_H37Rv SLNSARVIGHVVAAAPLVMASGLALGAVT---QRADAPVGIIALWALALL Mflv_2746|M.gilvum_PYR-GCK APTTPRKFAYGVIGMGVAFLCFVPLAGVS--AVPALVVLAILGVFAVSEL Mvan_3792|M.vanbaalenii_PYR-1 APTTPRKFAYGVIGMGLAFLCFVPLAGIT--AVPALLVMAVLGVFAVSEL MSMEG_3533|M.smegmatis_MC2_155 APTTPRKFSYAVIGMGVAFLLFLPMAGTTGRAVPALVVAAILALFAISEL MMAR_0690|M.marinum_M VMGVPSAVG--IQAAALVLLG----AGLG------AMIATIMPALADAME MAB_1338|M.abscessus_ATCC_1997 IVAIPAFVALRICPQPWIALALAAVVGIT-----VNIPFAVLVKLGQDYL MAV_3702|M.avium_104 LYGWWCMHRGVPYFPNLVLPIVVGGIGIG----MAVVPLTLSAIAGVGFD . : . Mb1660|M.bovis_AF2122/97 IIGTGIGIAWPHLTVRAMDSVADPAESSAAAAAINVVQLISGAFGAGLAG Rv1634|M.tuberculosis_H37Rv IIGTGIGIAWPHLTVRAMDSVADPAESSAAAAAINVVQLISGAFGAGLAG Mflv_2746|M.gilvum_PYR-GCK LLSP-IGLS-----------VTTKLAPQAFRAQMMALYFFSVGLGTSMSG Mvan_3792|M.vanbaalenii_PYR-1 LLSP-IGLS-----------VTTKLAPEAFRAQMMALYFFSVGLGTSMSG MSMEG_3533|M.smegmatis_MC2_155 TISP-IGLS-----------VTTKLAPEAFRAQMMALYFFSLGLGTAMSG MMAR_0690|M.marinum_M SAGG-------------------AQRPGTAAAAYNLAFSAGTVAGGPLAG MAB_1338|M.abscessus_ATCC_1997 PTRP-----------------------GTAAGVTLGLAVSIGGFFVPLLG MAV_3702|M.avium_104 QIGPVSAVT----------LMLQSLGGPLVLAVIQAVITSRTLYLGGTTG . * Mb1660|M.bovis_AF2122/97 VVVNTAKGGEVAAARGLYMAFTVLAAAGVIASYQATHRDRRLPR------ Rv1634|M.tuberculosis_H37Rv VVVNTAKGGEVAAARGLYMAFTVLAAAGVIASYQATHRDRRLPR------ Mflv_2746|M.gilvum_PYR-GCK VLAGYYDTSREAAYFGVLGAIAVVAGVVVFAISPWISRQMEGVH------ Mvan_3792|M.vanbaalenii_PYR-1 VLARYYDPSREVAYFGILGGVAVAAGVIVFAIAPWISRQMEGVH------ MSMEG_3533|M.smegmatis_MC2_155 VLAGYYDPAHEFAYFGILGLVAIVVGIVVFAVSPRITRLMEGVH------ MMAR_0690|M.marinum_M WMADLRSFQDAAMLIAVVTLTCGVLAALVHAAVVRRAVSDA--------- MAB_1338|M.abscessus_ATCC_1997 VLADHHGPQAVLTTLCVAPILAIVLAFLLPHPERE--------------- MAV_3702|M.avium_104 PVKTMNDAQLQALDHGYTYGLLWVAGAAVIVGAAALFIGYTPEQVAHAQE : . : Mb1660|M.bovis_AF2122/97 ---------- Rv1634|M.tuberculosis_H37Rv ---------- Mflv_2746|M.gilvum_PYR-GCK ---------- Mvan_3792|M.vanbaalenii_PYR-1 ---------- MSMEG_3533|M.smegmatis_MC2_155 ---------- MMAR_0690|M.marinum_M ---------- MAB_1338|M.abscessus_ATCC_1997 ---------- MAV_3702|M.avium_104 VKEAMDAGEL