For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGDLGDWVKVDPHAARPLFDQLRTQIIAGVRDGELAPGTRLPTVRELAGQVNLAVNTVARAYRELEAAGI LETRGRFGTFVARADPADVAMATAANTYVSAARALGVEKDEALRYIESAFG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_2135 | - | - | 100% (121) | regulatory protein GntR, HTH |
M. gilvum PYR-GCK | Mflv_2603 | - | 9e-08 | 39.47% (76) | UbiC transcription regulator-associated domain-containing |
M. gilvum PYR-GCK | Mflv_1181 | - | 2e-07 | 53.85% (52) | GntR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1183 | - | 2e-41 | 67.54% (114) | transcriptional regulatory protein |
M. tuberculosis H37Rv | Rv1152 | - | 2e-41 | 67.54% (114) | transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3582 | - | 6e-08 | 36.28% (113) | GntR family transcriptional regulator |
M. marinum M | MMAR_4301 | - | 3e-41 | 67.54% (114) | transcriptional regulatory protein |
M. avium 104 | MAV_1290 | - | 7e-45 | 72.41% (116) | regulatory protein GntR, HTH |
M. smegmatis MC2 155 | MSMEG_5174 | - | 2e-48 | 76.72% (116) | regulatory protein GntR, HTH |
M. thermoresistible (build 8) | TH_3932 | - | 4e-08 | 37.11% (97) | PUTATIVE transcriptional regulator, GntR family |
M. ulcerans Agy99 | MUL_0993 | - | 1e-38 | 64.04% (114) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_4569 | - | 1e-57 | 86.78% (121) | regulatory protein GntR, HTH |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2135|M.gilvum_PYR-GCK ---MGDLGDWVKVDPHAARPLFDQLRTQIIAGVRDGELAPGTRLPTVREL Mvan_4569|M.vanbaalenii_PYR-1 ---MAELGDWVRVDPHAARPLFDQLRTQIIAGIRDGELTPGTRLPTVREL MSMEG_5174|M.smegmatis_MC2_155 ------MGDWVSIDPDSDKPLFDQLRVQIIDGIRDGRLSPGTRLPTVREL MMAR_4301|M.marinum_M ----MELRDWLRVDVKAGKPLFDQLRTQVIDGVRAGALPPGTRLPTVRDL MUL_0993|M.ulcerans_Agy99 ----MELRDWLRVDVKAGKPLFDQLGTQVIDGVRAGALPPGTRLPTVRDL Mb1183|M.bovis_AF2122/97 ----MELRDWLRVDVKAGKPLFDQLRTQVIDGVRAGALPPGTRLPTVRDL Rv1152|M.tuberculosis_H37Rv ----MELRDWLRVDVKAGKPLFDQLRTQVIDGVRAGALPPGTRLPTVRDL MAV_1290|M.avium_104 ----MELGDWLRVDMKAGKPLFDQLRTQVIEGVREGALPPGTRLPTVREL TH_3932|M.thermoresistible__bu MTRTATPMRSTTINRFADRPLYRQLS-EVLEARLIERARPGDRLPSEAEL MAB_3582|M.abscessus_ATCC_1997 ----------MRIRRHAA------VADGIAEQIRTGALPAGTRLPTHRAL : : : : .* ***: * Mflv_2135|M.gilvum_PYR-GCK AGQVNLAVNTVARAYRELEAAGILETRGRFGTFVARAD------------ Mvan_4569|M.vanbaalenii_PYR-1 AGQINLAVNTVARAYRELEAAGILETRGRFGTYVARSD------------ MSMEG_5174|M.smegmatis_MC2_155 ATHVGLAVNTVARSYRELEAAGVLETRGRFGTFVARAD------------ MMAR_4301|M.marinum_M AGQLGVAANTVARAYRELESAAIVETRGRFGTFISRFD------------ MUL_0993|M.ulcerans_Agy99 VGQLGVAANTVARAYRELESVAIVETRGRCGTFISRFD------------ Mb1183|M.bovis_AF2122/97 AGQLGVAANTVARAYRELESAAIVETRGRFGTFISRFD------------ Rv1152|M.tuberculosis_H37Rv AGQLGVAANTVARAYRELESAAIVETRGRFGTFISRFD------------ MAV_1290|M.avium_104 AGQLGVAVNTVARAYRELESAAIIETRGRFGTFVARYD------------ TH_3932|M.thermoresistible__bu SGQFGVNRLTVRRALHELAQRGIIETVHGRGSFVARQP------------ MAB_3582|M.abscessus_ATCC_1997 AARHGIAVATASRVYRDLTASGLVVGEPGRGTFVRDLSGFAGLEPARLSA : .: *. * ::* .:: *::: Mflv_2135|M.gilvum_PYR-GCK --------PADVAMATAANTYVSAARALG--------------------- Mvan_4569|M.vanbaalenii_PYR-1 --------PADAAMATAAHTYVATARALG--------------------- MSMEG_5174|M.smegmatis_MC2_155 --------PADAAMAAAANSFAEAARSLG--------------------- MMAR_4301|M.marinum_M --------PTDAAMAAAAKEYVEVARALG--------------------- MUL_0993|M.ulcerans_Agy99 --------PTDAAMAAAAKEYVEVARALG--------------------- Mb1183|M.bovis_AF2122/97 --------PTDAAMAAAAKEYVGVARALG--------------------- Rv1152|M.tuberculosis_H37Rv --------PTDAAMAAAAKEYVGVARALG--------------------- MAV_1290|M.avium_104 --------PTDAAMAAAAREYVRVARGLG--------------------- TH_3932|M.thermoresistible__bu --------VRYRLSATRDASFTRGMRELGHPVRIEVLGAETTRCRRLRTE MAB_3582|M.abscessus_ATCC_1997 GQRTADLSFNQPLSTGQDDELRQALRGLAAEG----DLTSLLYQQPPGGR : * *. Mflv_2135|M.gilvum_PYR-GCK ------VEKDEALRYIESAFG----------------------------- Mvan_4569|M.vanbaalenii_PYR-1 ------VGKGEALRYVETAFG----------------------------- MSMEG_5174|M.smegmatis_MC2_155 ------ISRDDALRYIESALD----------------------------- MMAR_4301|M.marinum_M ------LTKSDAIRYLTAVPDD---------------------------- MUL_0993|M.ulcerans_Agy99 ------LTKSDAIRYLTAVPDD---------------------------- Mb1183|M.bovis_AF2122/97 ------LTKSDAMRYLTHVPDD---------------------------- Rv1152|M.tuberculosis_H37Rv ------LTKSDAMRYLTHVPDD---------------------------- MAV_1290|M.avium_104 ------LDKADAVRYIESVPDE---------------------------- TH_3932|M.thermoresistible__bu LHTAGEVLTTTTLRHVDGQPWSVSVTSIALDRFPGIAQQWSGSTSLFDFL MAB_3582|M.abscessus_ATCC_1997 SRDRAAIASYLLGRGIDVAPHSVLITGGAQQGLDALLVALAEPRAVVAVD : * : Mflv_2135|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4569|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5174|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_4301|M.marinum_M -------------------------------------------------- MUL_0993|M.ulcerans_Agy99 -------------------------------------------------- Mb1183|M.bovis_AF2122/97 -------------------------------------------------- Rv1152|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1290|M.avium_104 -------------------------------------------------- TH_3932|M.thermoresistible__bu WQTFG---VRMRRAYRSFSAVLADLA--EAQHLGLRTGAPVLEMRGLNVD MAB_3582|M.abscessus_ATCC_1997 ALTYPGIRMLATARHLDLAAVRADTTGMDIDHLEWLCGQRPISMLYLIPT Mflv_2135|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4569|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5174|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_4301|M.marinum_M -------------------------------------------------- MUL_0993|M.ulcerans_Agy99 -------------------------------------------------- Mb1183|M.bovis_AF2122/97 -------------------------------------------------- Rv1152|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1290|M.avium_104 -------------------------------------------------- TH_3932|M.thermoresistible__bu QHGAPVAVVRHRFRGDRVELTVDLA------------------------- MAB_3582|M.abscessus_ATCC_1997 LHNPLGYILGASARQRIAALAARHDFHIIEDATYAFLEPAAPPPVQTVAP Mflv_2135|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4569|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5174|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_4301|M.marinum_M -------------------------------------------------- MUL_0993|M.ulcerans_Agy99 -------------------------------------------------- Mb1183|M.bovis_AF2122/97 -------------------------------------------------- Rv1152|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1290|M.avium_104 -------------------------------------------------- TH_3932|M.thermoresistible__bu -------------------------------------------------- MAB_3582|M.abscessus_ATCC_1997 ERTFYIGSMSKNLASGLRIGYVVAPLARRPALIRSLRATSWGASSIASAL Mflv_2135|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4569|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5174|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_4301|M.marinum_M -------------------------------------------------- MUL_0993|M.ulcerans_Agy99 -------------------------------------------------- Mb1183|M.bovis_AF2122/97 -------------------------------------------------- Rv1152|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1290|M.avium_104 -------------------------------------------------- TH_3932|M.thermoresistible__bu -------------------------------------------------- MAB_3582|M.abscessus_ATCC_1997 TTRWLTDGTAAKLEKQRREDARQRQVIARAELAGLDYHAHPASYSGWLTL Mflv_2135|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4569|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5174|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_4301|M.marinum_M -------------------------------------------------- MUL_0993|M.ulcerans_Agy99 -------------------------------------------------- Mb1183|M.bovis_AF2122/97 -------------------------------------------------- Rv1152|M.tuberculosis_H37Rv -------------------------------------------------- MAV_1290|M.avium_104 -------------------------------------------------- TH_3932|M.thermoresistible__bu -------------------------------------------------- MAB_3582|M.abscessus_ATCC_1997 PEHARSDVIAHELAEHGIMVTTADAFATTAHAPNALRLALATPELSELTA Mflv_2135|M.gilvum_PYR-GCK ---------- Mvan_4569|M.vanbaalenii_PYR-1 ---------- MSMEG_5174|M.smegmatis_MC2_155 ---------- MMAR_4301|M.marinum_M ---------- MUL_0993|M.ulcerans_Agy99 ---------- Mb1183|M.bovis_AF2122/97 ---------- Rv1152|M.tuberculosis_H37Rv ---------- MAV_1290|M.avium_104 ---------- TH_3932|M.thermoresistible__bu ---------- MAB_3582|M.abscessus_ATCC_1997 ALRHIRTATT