For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_0893 (-)

annotation: two component transcriptional regulator
coordinates: 937674 - 938429
length: 251

MTMDHHPGTPPERAKGYRALVVDDELPLAEVVASYLEREQFEAVVADNGVDAIAVARDLDPDVVILDIGL
PGIDGLEVCRQLRTFSDAYVVMLTARDTEIDTVLGLTVGADDYITKPFSPRELVARIRAMLRRPRVLQSA
TATAGIDVAPPRRFGALSIDVAAREVRIDDEQILLTRTEFDILEALSGRPGNVLSRRQLLEIVRDGPWVG
NEHLVDVHIGHLRRKLGDDAASPRYIATVRGVGYRMGSGQ*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_0893--100% (251)two component transcriptional regulator
M. gilvum PYR-GCKMflv_2838-e-13092.03% (251) two component transcriptional regulator
M. gilvum PYR-GCKMflv_3887-e-12085.20% (250) two component transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0501regX37e-4744.05% (227) two component sensory transduction protein RegX3
M. tuberculosis H37RvRv0491regX37e-4744.05% (227) two component sensory transduction protein RegX3
M. leprae Br4923MLBr_00773mtrA1e-4544.35% (230) putative two-component response regulator
M. abscessus ATCC 19977MAB_3339-4e-9168.24% (233) putative sensory transduction protein
M. marinum MMMAR_0816regX31e-4644.05% (227) two-component sensory transduction protein RegX3
M. avium 104MAV_4660-8e-4744.05% (227) DNA-binding response regulator
M. smegmatis MC2 155MSMEG_0937regX37e-4945.81% (227) DNA-binding response regulator RegX3
M. thermoresistible (build 8)TH_4312-7e-4743.61% (227) PUTATIVE two component transcriptional regulator, winged helix
M. ulcerans Agy99MUL_4560regX37e-4744.05% (227) two component sensory transduction protein RegX3
M. vanbaalenii PYR-1Mvan_1834-1e-11684.21% (247) two component transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mb0501|M.bovis_AF2122/97            -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
Rv0491|M.tuberculosis_H37Rv         -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
MAV_4660|M.avium_104                -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
MMAR_0816|M.marinum_M               -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
MUL_4560|M.ulcerans_Agy99           -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
MSMEG_0937|M.smegmatis_MC2_155      --------------------MLIVEDEESLADPLAFLLRKEGFEATVVGD
TH_4312|M.thermoresistible__bu      -----------------MTSVLIVEDEESLADPLAFLLRKEGFETTIVTD
MLBr_00773|M.leprae_Br4923          ---MD----------IMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGD
Mflv_0893|M.gilvum_PYR-GCK          MMTMD-HHPGTPPERAKGYRALVVDDELPLAEVVASYLEREQFEAVVADN
Mvan_1834|M.vanbaalenii_PYR-1       ---ME-REKAAPGGRAAGYRALVVDDEVPLAEVIAGYLEREQFETIVAAN
MAB_3339|M.abscessus_ATCC_1997      ---MDGSSRTAAAGPVPDYRALVVDDEVPLAEVVASYLKRESFEVHLAHD
                                                         *:*:*: .**: ::  *. * *:. :  :

Mb0501|M.bovis_AF2122/97            GPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
Rv0491|M.tuberculosis_H37Rv         GPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
MAV_4660|M.avium_104                GSAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
MMAR_0816|M.marinum_M               GPAALAEFDRSGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
MUL_4560|M.ulcerans_Agy99           GPAALAEFDRSGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
MSMEG_0937|M.smegmatis_MC2_155      GPSALAEFERSGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
TH_4312|M.thermoresistible__bu      GPSALAEFERSGADIILLDLMLPGMSGTDVCRRLRAKSKVPVIMVTARDS
MLBr_00773|M.leprae_Br4923          GTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTD
Mflv_0893|M.gilvum_PYR-GCK          GVDAIAVARDLDPDVVILDIGLPGIDGLEVCRQLRTFSDAYVVMLTARDT
Mvan_1834|M.vanbaalenii_PYR-1       GLDAISVARELDPDVVILDLGLPGIDGLEVCRQIRTFSDAYVVMLTARDT
MAB_3339|M.abscessus_ATCC_1997      GRRALDLAREVDPDVVILDIGLPGVDGIEVCRQLRVFSDAYVVMLTARDT
                                    *  *:       .*:::**: ***:.* :**: :*. * . ::*:**:  

Mb0501|M.bovis_AF2122/97            EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEMSDGVLE
Rv0491|M.tuberculosis_H37Rv         EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEMSDGVLE
MAV_4660|M.avium_104                EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEISDGVLE
MMAR_0816|M.marinum_M               EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEVSDGVLE
MUL_4560|M.ulcerans_Agy99           EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEVSDGVLE
MSMEG_0937|M.smegmatis_MC2_155      EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGADNDDAGADDGVLE
TH_4312|M.thermoresistible__bu      EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGSDLDGADVDDSVLE
MLBr_00773|M.leprae_Br4923          TVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDD-----EPAEMLS
Mflv_0893|M.gilvum_PYR-GCK          EIDTVLGLTVGADDYITKPFSPRELVARIRAMLRRPRVLQSATATAGIDV
Mvan_1834|M.vanbaalenii_PYR-1       EIDTVLGLTVGADDYVTKPFSPRELVARIRAMLRRPRVLHTAGAAAERNV
MAB_3339|M.abscessus_ATCC_1997      EVDTIVGLSVGADDYVTKPFSPREVVARVRAMLRRPRRAPESPAAVTPEL
                                     :* ::**  *****: **:..:*::**:** ***               

Mb0501|M.bovis_AF2122/97            S-----GPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQ
Rv0491|M.tuberculosis_H37Rv         S-----GPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQ
MAV_4660|M.avium_104                S-----GPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQ
MMAR_0816|M.marinum_M               S-----GPVRMDVERHVVSVNGDAITLPLKEFDLLEYLMRNSGRVLTRGQ
MUL_4560|M.ulcerans_Agy99           S-----GPVRMDVERHVVSVNGDAITLPLKEFDLLEYLMRNSGRVLTRGQ
MSMEG_0937|M.smegmatis_MC2_155      A-----GPVRMDVERHVVSVNGEPITLPLKEFDLLEYLMRNSGRVLTRGQ
TH_4312|M.thermoresistible__bu      A-----GPVRMDVDRHVVTVRGEPITLPLKEFELLEYLLRNSGRVLTRGQ
MLBr_00773|M.leprae_Br4923          I-----ADVDIDVPAHKVTRNGEHISLTPLEFDLLVALARKPRQVFTRDV
Mflv_0893|M.gilvum_PYR-GCK          APPRRFGALSIDVAAREVRIDDEQILLTRTEFDILEALSGRPGNVLSRRQ
Mvan_1834|M.vanbaalenii_PYR-1       TPPRQFGPLSIDVAAREVRIDGEPILLTRTEFDILEALSGHPGIVLSRRQ
MAB_3339|M.abscessus_ATCC_1997      SPPRVFGALRINVDGREVHVGERPVTLTRTEFDVLAALSSRPGIVLSRKQ
                                          . : ::*  : *      : *.  **::*  *  ..  *::*  

Mb0501|M.bovis_AF2122/97            LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Rv0491|M.tuberculosis_H37Rv         LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
MAV_4660|M.avium_104                LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
MMAR_0816|M.marinum_M               LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
MUL_4560|M.ulcerans_Agy99           LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
MSMEG_0937|M.smegmatis_MC2_155      LIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKLEG
TH_4312|M.thermoresistible__bu      LIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKLEG
MLBr_00773|M.leprae_Br4923          LLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP
Mflv_0893|M.gilvum_PYR-GCK          LLEIVRDGPWVGNEHLVDVHIGHLRRKLGDDAASPRYIATVRGVGYRMGS
Mvan_1834|M.vanbaalenii_PYR-1       LIEIVRDGPWVGNEHLVDVHIGHLRRKLGDDAAQPRYIRTVRGVGYRMGT
MAB_3339|M.abscessus_ATCC_1997      LLDTVWGDTWVGNDNIVDVHVGHLRQKLGDSPSQPRYVMTVRGVGYRMGT
                                    *:: * .    .: . ::**: :** *:  .. .*  : ****:**:   

Mb0501|M.bovis_AF2122/97            -----
Rv0491|M.tuberculosis_H37Rv         -----
MAV_4660|M.avium_104                -----
MMAR_0816|M.marinum_M               -----
MUL_4560|M.ulcerans_Agy99           -----
MSMEG_0937|M.smegmatis_MC2_155      -----
TH_4312|M.thermoresistible__bu      -----
MLBr_00773|M.leprae_Br4923          P----
Mflv_0893|M.gilvum_PYR-GCK          GQ---
Mvan_1834|M.vanbaalenii_PYR-1       GSGAD
MAB_3339|M.abscessus_ATCC_1997      GS---