For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_1834 (-)

annotation: two component transcriptional regulator
coordinates: 1956072 - 1956827
length: 251

EREKAAPGGRAAGYRALVVDDEVPLAEVIAGYLEREQFETIVAANGLDAISVARELDPDVVILDLGLPGI
DGLEVCRQIRTFSDAYVVMLTARDTEIDTVLGLTVGADDYVTKPFSPRELVARIRAMLRRPRVLHTAGAA
AERNVTPPRQFGPLSIDVAAREVRIDGEPILLTRTEFDILEALSGHPGIVLSRRQLIEIVRDGPWVGNEH
LVDVHIGHLRRKLGDDAAQPRYIRTVRGVGYRMGTGSGAD*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_1834--100% (251)two component transcriptional regulator
M. vanbaalenii PYR-1Mvan_3674-4e-9972.98% (248) two component transcriptional regulator
M. vanbaalenii PYR-1Mvan_0831-2e-4845.37% (227) two component transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0501regX35e-4744.49% (227) two component sensory transduction protein RegX3
M. gilvum PYR-GCKMflv_2838-1e-11783.40% (247) two component transcriptional regulator
M. tuberculosis H37RvRv0491regX35e-4744.49% (227) two component sensory transduction protein RegX3
M. leprae Br4923MLBr_00773mtrA6e-4644.64% (233) putative two-component response regulator
M. abscessus ATCC 19977MAB_3339-2e-9366.80% (244) putative sensory transduction protein
M. marinum MMMAR_0816regX38e-4744.74% (228) two-component sensory transduction protein RegX3
M. avium 104MAV_4660-5e-4744.30% (228) DNA-binding response regulator
M. smegmatis MC2 155MSMEG_0937regX31e-4946.70% (227) DNA-binding response regulator RegX3
M. thermoresistible (build 8)TH_4312-3e-4945.81% (227) PUTATIVE two component transcriptional regulator, winged helix
M. ulcerans Agy99MUL_4560regX35e-4744.74% (228) two component sensory transduction protein RegX3

CLUSTAL 2.0.9 multiple sequence alignment


Mb0501|M.bovis_AF2122/97            -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
Rv0491|M.tuberculosis_H37Rv         -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
MAV_4660|M.avium_104                -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
MMAR_0816|M.marinum_M               -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
MUL_4560|M.ulcerans_Agy99           -----------------MTSVLIVEDEESLADPLAFLLRKEGFEATVVTD
MSMEG_0937|M.smegmatis_MC2_155      --------------------MLIVEDEESLADPLAFLLRKEGFEATVVGD
TH_4312|M.thermoresistible__bu      -----------------MTSVLIVEDEESLADPLAFLLRKEGFETTIVTD
MLBr_00773|M.leprae_Br4923          ---MD----------IMRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGD
Mvan_1834|M.vanbaalenii_PYR-1       ---ME-REKAAPGGRAAGYRALVVDDEVPLAEVIAGYLEREQFETIVAAN
Mflv_2838|M.gilvum_PYR-GCK          MWSME-HHPGRSPEQAKGYRALVVDDELPLAEVVASYLERDQFEAVVAGN
MAB_3339|M.abscessus_ATCC_1997      ---MDGSSRTAAAGPVPDYRALVVDDEVPLAEVVASYLKRESFEVHLAHD
                                                         *:*:*: .**: ::  *. : *:. :  :

Mb0501|M.bovis_AF2122/97            GPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
Rv0491|M.tuberculosis_H37Rv         GPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
MAV_4660|M.avium_104                GSAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
MMAR_0816|M.marinum_M               GPAALAEFDRSGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
MUL_4560|M.ulcerans_Agy99           GPAALAEFDRSGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
MSMEG_0937|M.smegmatis_MC2_155      GPSALAEFERSGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS
TH_4312|M.thermoresistible__bu      GPSALAEFERSGADIILLDLMLPGMSGTDVCRRLRAKSKVPVIMVTARDS
MLBr_00773|M.leprae_Br4923          GTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTD
Mvan_1834|M.vanbaalenii_PYR-1       GLDAISVARELDPDVVILDLGLPGIDGLEVCRQIRTFSDAYVVMLTARDT
Mflv_2838|M.gilvum_PYR-GCK          GVDAIAVARDFDPDVVILDLGLPGIDGLEVCRQLRTFSDAYVVMLTARDT
MAB_3339|M.abscessus_ATCC_1997      GRRALDLAREVDPDVVILDIGLPGVDGIEVCRQLRVFSDAYVVMLTARDT
                                    *  *:       .*:::**: ***:.* :**: :*. * . ::*:**:  

Mb0501|M.bovis_AF2122/97            EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEMSDGVLE
Rv0491|M.tuberculosis_H37Rv         EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEMSDGVLE
MAV_4660|M.avium_104                EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEISDGVLE
MMAR_0816|M.marinum_M               EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEVSDGVLE
MUL_4560|M.ulcerans_Agy99           EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSEVSDGVLE
MSMEG_0937|M.smegmatis_MC2_155      EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGADNDDAGADDGVLE
TH_4312|M.thermoresistible__bu      EIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGSDLDGADVDDSVLE
MLBr_00773|M.leprae_Br4923          TVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDD-----EPAEMLS
Mvan_1834|M.vanbaalenii_PYR-1       EIDTVLGLTVGADDYVTKPFSPRELVARIRAMLRRPRVLHTAGAAAERNV
Mflv_2838|M.gilvum_PYR-GCK          ELDTVLGLTVGADDYITKPFSPRELVARVRAMLRRPRVLQSATATAEREV
MAB_3339|M.abscessus_ATCC_1997      EVDTIVGLSVGADDYVTKPFSPREVVARVRAMLRRPRRAPESPAAVTPEL
                                     :* ::**  *****: **:..:*::**:** ***               

Mb0501|M.bovis_AF2122/97            S-----GPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQ
Rv0491|M.tuberculosis_H37Rv         S-----GPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQ
MAV_4660|M.avium_104                S-----GPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQ
MMAR_0816|M.marinum_M               S-----GPVRMDVERHVVSVNGDAITLPLKEFDLLEYLMRNSGRVLTRGQ
MUL_4560|M.ulcerans_Agy99           S-----GPVRMDVERHVVSVNGDAITLPLKEFDLLEYLMRNSGRVLTRGQ
MSMEG_0937|M.smegmatis_MC2_155      A-----GPVRMDVERHVVSVNGEPITLPLKEFDLLEYLMRNSGRVLTRGQ
TH_4312|M.thermoresistible__bu      A-----GPVRMDVDRHVVTVRGEPITLPLKEFELLEYLLRNSGRVLTRGQ
MLBr_00773|M.leprae_Br4923          I-----ADVDIDVPAHKVTRNGEHISLTPLEFDLLVALARKPRQVFTRDV
Mvan_1834|M.vanbaalenii_PYR-1       TPPRQFGPLSIDVAAREVRIDGEPILLTRTEFDILEALSGHPGIVLSRRQ
Mflv_2838|M.gilvum_PYR-GCK          APPRRFGALSVDVAAREVGIDDEQILLTRTEFDILEALSGRPGIVLSRRQ
MAB_3339|M.abscessus_ATCC_1997      SPPRVFGALRINVDGREVHVGERPVTLTRTEFDVLAALSSRPGIVLSRKQ
                                          . : ::*  : *      : *.  **::*  *  ..  *::*  

Mb0501|M.bovis_AF2122/97            LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Rv0491|M.tuberculosis_H37Rv         LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
MAV_4660|M.avium_104                LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
MMAR_0816|M.marinum_M               LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
MUL_4560|M.ulcerans_Agy99           LIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
MSMEG_0937|M.smegmatis_MC2_155      LIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKLEG
TH_4312|M.thermoresistible__bu      LIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKLEG
MLBr_00773|M.leprae_Br4923          LLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP
Mvan_1834|M.vanbaalenii_PYR-1       LIEIVRDGPWVGNEHLVDVHIGHLRRKLGDDAAQPRYIRTVRGVGYRMGT
Mflv_2838|M.gilvum_PYR-GCK          LLEIVRDGPWVGNEHLVDVHIGHLRRKLGDDAARPRYIATVRGVGYRMGT
MAB_3339|M.abscessus_ATCC_1997      LLDTVWGDTWVGNDNIVDVHVGHLRQKLGDSPSQPRYVMTVRGVGYRMGT
                                    *:: * .    .: . ::**: :** *:  .. .*  : ****:**:   

Mb0501|M.bovis_AF2122/97            -----
Rv0491|M.tuberculosis_H37Rv         -----
MAV_4660|M.avium_104                -----
MMAR_0816|M.marinum_M               -----
MUL_4560|M.ulcerans_Agy99           -----
MSMEG_0937|M.smegmatis_MC2_155      -----
TH_4312|M.thermoresistible__bu      -----
MLBr_00773|M.leprae_Br4923          P----
Mvan_1834|M.vanbaalenii_PYR-1       GSGAD
Mflv_2838|M.gilvum_PYR-GCK          GQ---
MAB_3339|M.abscessus_ATCC_1997      GS---