For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_0816 (regX3)

annotation: two-component sensory transduction protein RegX3
coordinates: 978965 - 979648
length: 227

MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRSGADIVLLDLMLPGMSGTDVCKQLRAR
SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEVSDGVLESGPVRMDV
ERHVVSVNGDAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPA
NPVHLVTVRGLGYKLEG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_0816regX3-100% (227)two-component sensory transduction protein RegX3
M. marinum MMMAR_1299mtrA8e-5749.32% (221) two-component sensory transduction transcriptional
M. marinum MMMAR_4455trcR2e-4439.91% (223) two-component transcriptional regulator TrcR

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0501regX31e-12498.68% (227) two component sensory transduction protein RegX3
M. gilvum PYR-GCKMflv_0082-1e-11793.86% (228) two component transcriptional regulator
M. tuberculosis H37RvRv0491regX31e-12498.68% (227) two component sensory transduction protein RegX3
M. leprae Br4923MLBr_02439-1e-10596.95% (197) putative two-component system response regulator
M. abscessus ATCC 19977MAB_4047c-1e-11691.67% (228) sensory transduction protein RegX3
M. avium 104MAV_4660-1e-12398.24% (227) DNA-binding response regulator
M. smegmatis MC2 155MSMEG_0937regX31e-11694.22% (225) DNA-binding response regulator RegX3
M. thermoresistible (build 8)TH_4312-1e-11389.04% (228) PUTATIVE two component transcriptional regulator, winged helix
M. ulcerans Agy99MUL_4560regX31e-125100.00% (227) two component sensory transduction protein RegX3
M. vanbaalenii PYR-1Mvan_0831-1e-11893.86% (228) two component transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_0082|M.gilvum_PYR-GCK          MTSVLIVEDEESLADPLAFLLRKEGFETTVVTDGPSALAEFERAGADIVL
Mvan_0831|M.vanbaalenii_PYR-1       MTSVLIVEDEESLADPLAFLLRKEGFEATVVADGPSALAEFERAGADIVL
Mb0501|M.bovis_AF2122/97            MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVL
Rv0491|M.tuberculosis_H37Rv         MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVL
MAV_4660|M.avium_104                MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVL
MMAR_0816|M.marinum_M               MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRSGADIVL
MUL_4560|M.ulcerans_Agy99           MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRSGADIVL
MLBr_02439|M.leprae_Br4923          -----------------------------MVTDGPAALAEFDRSGADIVL
MSMEG_0937|M.smegmatis_MC2_155      ---MLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFERSGADIVL
MAB_4047c|M.abscessus_ATCC_199      MTSVLIVEDEDSLADPLAFLLRKEGFEATIVNDGPSALAEFERAGADIVL
TH_4312|M.thermoresistible__bu      MTSVLIVEDEESLADPLAFLLRKEGFETTIVTDGPSALAEFERSGADIIL
                                                                 :* **.:*****:*:****:*

Mflv_0082|M.gilvum_PYR-GCK          LDLMLPGMSGTDVCKQLRSRSSVPVIMVTARDSEIDKVVGLELGADDYVT
Mvan_0831|M.vanbaalenii_PYR-1       LDLMLPGMSGTDVCKQLRSRSSVPVIMVTARDSEIDKVVGLELGADDYVT
Mb0501|M.bovis_AF2122/97            LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
Rv0491|M.tuberculosis_H37Rv         LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MAV_4660|M.avium_104                LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MMAR_0816|M.marinum_M               LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MUL_4560|M.ulcerans_Agy99           LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MLBr_02439|M.leprae_Br4923          LDLMLPGMSGTDVYKQLRVRSSVPVIMVTARDSEIDKVVGLELGADDYVT
MSMEG_0937|M.smegmatis_MC2_155      LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MAB_4047c|M.abscessus_ATCC_199      LDLMLPGMSGTDVCKQLRAKSSVPVIMVTARDSEIDKVVGLELGADDYVT
TH_4312|M.thermoresistible__bu      LDLMLPGMSGTDVCRRLRAKSKVPVIMVTARDSEIDKVVGLELGADDYVT
                                    ************* ::** :*.****************************

Mflv_0082|M.gilvum_PYR-GCK          KPYSARELIARIRAVLRRGADADDLGVADGVLEAGPVRMDVERHVVSVNG
Mvan_0831|M.vanbaalenii_PYR-1       KPYSARELIARIRAVLRRGSDADDAGIGDGVLEAGPVRMDVERHVVSVNG
Mb0501|M.bovis_AF2122/97            KPYSARELIARIRAVLRRGGD-DDSEMSDGVLESGPVRMDVERHVVSVNG
Rv0491|M.tuberculosis_H37Rv         KPYSARELIARIRAVLRRGGD-DDSEMSDGVLESGPVRMDVERHVVSVNG
MAV_4660|M.avium_104                KPYSARELIARIRAVLRRGGD-DDSEISDGVLESGPVRMDVERHVVSVNG
MMAR_0816|M.marinum_M               KPYSARELIARIRAVLRRGGD-DDSEVSDGVLESGPVRMDVERHVVSVNG
MUL_4560|M.ulcerans_Agy99           KPYSARELIARIRAVLRRGGD-DDSEVSDGVLESGPVRMDVERHVVSVNG
MLBr_02439|M.leprae_Br4923          KPYSARELIARIRAVLRRGGD-DDSEISDGVLESGPLRMDVERHVVSVNG
MSMEG_0937|M.smegmatis_MC2_155      KPYSARELIARIRAVLRRGADNDDAGADDGVLEAGPVRMDVERHVVSVNG
MAB_4047c|M.abscessus_ATCC_199      KPYSARELIARIRAVLRRGSDSEETASGDGVLEAGPVRMDVDRHTVSVNG
TH_4312|M.thermoresistible__bu      KPYSARELIARIRAVLRRGSDLDGADVDDSVLEAGPVRMDVDRHVVTVRG
                                    *******************.* :     *.***:**:****:**.*:*.*

Mflv_0082|M.gilvum_PYR-GCK          APITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
Mvan_0831|M.vanbaalenii_PYR-1       QSITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
Mb0501|M.bovis_AF2122/97            DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
Rv0491|M.tuberculosis_H37Rv         DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MAV_4660|M.avium_104                DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MMAR_0816|M.marinum_M               DAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MUL_4560|M.ulcerans_Agy99           DAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MLBr_02439|M.leprae_Br4923          YAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGVDYVGDTKTLDVHVK
MSMEG_0937|M.smegmatis_MC2_155      EPITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MAB_4047c|M.abscessus_ATCC_199      EAITLPLKEFDLLEYLIRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
TH_4312|M.thermoresistible__bu      EPITLPLKEFELLEYLLRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
                                     .********:*****:******************.**************

Mflv_0082|M.gilvum_PYR-GCK          RLRSKIESDPANPVHLVTVRGLGYKLEG
Mvan_0831|M.vanbaalenii_PYR-1       RLRSKIEADPANPVHLVTVRGLGYKLEG
Mb0501|M.bovis_AF2122/97            RLRSKIEADPANPVHLVTVRGLGYKLEG
Rv0491|M.tuberculosis_H37Rv         RLRSKIEADPANPVHLVTVRGLGYKLEG
MAV_4660|M.avium_104                RLRSKIEADPANPVHLVTVRGLGYKLEG
MMAR_0816|M.marinum_M               RLRSKIEADPANPVHLVTVRGLGYKLEG
MUL_4560|M.ulcerans_Agy99           RLRSKIEADPANPVHLVTVRGLGYKLEG
MLBr_02439|M.leprae_Br4923          RLRSKIEADPANPVHLVTVRGLGYKLES
MSMEG_0937|M.smegmatis_MC2_155      RLRSKIEEDPANPVHLVTVRGLGYKLEG
MAB_4047c|M.abscessus_ATCC_199      RLRSKIEADPANPVHLVTVRGLGYKLEG
TH_4312|M.thermoresistible__bu      RLRSKIEEDPANPVHLVTVRGLGYKLEG
                                    ******* *******************.