For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VERLVSGAARSALDAWHRHGLEGDVSLGPGSMSAKVAVSVFSVEFLVHAWDYAVAVGSELKAADSLAEYV LELARKLIKPEERSVAGFNEPVDVPEDGGALERLIAFTGRNPAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3801c | - | - | 100% (114) | hypothetical protein Mb3801c |
M. bovis AF2122 / 97 | Mb0591 | - | 7e-25 | 46.43% (112) | ArsR family transcriptional regulator |
M. bovis AF2122 / 97 | Mb1756 | - | 1e-08 | 32.69% (104) | hypothetical protein Mb1756 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1118 | - | 3e-06 | 32.38% (105) | hypothetical protein Mflv_1118 |
M. tuberculosis H37Rv | Rv3773c | - | 9e-61 | 100.00% (114) | hypothetical protein Rv3773c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4446 | - | 8e-25 | 50.00% (104) | hypothetical protein MAB_4446 |
M. marinum M | MMAR_5328 | - | 3e-39 | 66.37% (113) | hypothetical protein MMAR_5328 |
M. avium 104 | MAV_0248 | - | 8e-34 | 57.89% (114) | hypothetical protein MAV_0248 |
M. smegmatis MC2 155 | MSMEG_6832 | - | 7e-22 | 40.35% (114) | hypothetical protein MSMEG_6832 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_4409 | - | 9e-39 | 65.49% (113) | hypothetical protein MUL_4409 |
M. vanbaalenii PYR-1 | Mvan_2932 | - | 2e-07 | 31.20% (125) | hypothetical protein Mvan_2932 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3801c|M.bovis_AF2122/97 -------------------------------------------------- Rv3773c|M.tuberculosis_H37Rv ---------MPPESRPGPDSPPTDELACAEAALQVLQQVLHTIGRQDKAK MMAR_5328|M.marinum_M ---------MASDLRPGPDSPPTDELASAERALAVLQQVLHPIGDGDLFR MUL_4409|M.ulcerans_Agy99 ---------MASDLRPGPDSPPTDELASAERALAVLQQVLHPIGDGDLFR MAV_0248|M.avium_104 ------MANMAPDLRPGPDSPPTDELDGAEAALRVMQQVLHPIAADDMPR MSMEG_6832|M.smegmatis_MC2_155 -------MTYAGARASTPHWADMDELSSAQSALSALRPVLSAITPDDCGL MAB_4446|M.abscessus_ATCC_1997 ---------MTTALNP---------LETVANARAALHEVVSRLTEADNDK Mflv_1118|M.gilvum_PYR-GCK -------------------------MIDMTAACAGTAGLLDRVRDDQLSG Mvan_2932|M.vanbaalenii_PYR-1 MTGLGRHNGAMIAPTSSTTDHLKDPRPILDRAIATGGVVIAGVRPEQLTD Mb3801c|M.bovis_AF2122/97 --------------------------------------------MER--- Rv3773c|M.tuberculosis_H37Rv QTPCPGYDVKKLTEHLLNSIMVLGGMVGAEFS-----LRADIDSVER--- MMAR_5328|M.marinum_M PTPCPEYDVSGLTGHLLNSIVVLGGMAGAEFT-----MRDHTSSAEG--- MUL_4409|M.ulcerans_Agy99 PTPCPEYDVSGLTGHLLNSIVVLDGMAGAEFT-----MRDHTSTPEG--- MAV_0248|M.avium_104 PTPCAQFDVTRLTDHLLKSLEALGGMAGADFPD----HADSADSVER--- MSMEG_6832|M.smegmatis_MC2_155 PTPCAGFDVAALGEHLVGTVRMVGAAADAGFVRF--EVVSHDDDIEA--- MAB_4446|M.abscessus_ATCC_1997 QTPNAKFTVAQLTDHLQNSIKLLGGAAGVDIA------LTTEGSVAD--- Mflv_1118|M.gilvum_PYR-GCK ATPCSGMDLGALVAHIGGLALAFDAAARKEFGPLTDTPPEMGDGVEDGWR Mvan_2932|M.vanbaalenii_PYR-1 PTPCTDMDVRALLAHLIGVLARVAALGNGENP----FAVTETSVADDRWL Mb3801c|M.bovis_AF2122/97 -LVSGAARSALDAWHR-HGLEGDVSLGPGSMSAKVAVSVFSVEFLVHAWD Rv3773c|M.tuberculosis_H37Rv -LVSGAARSALDAWHR-HGLEGDVSLGPGSMSAKVAVSVFSVEFLVHAWD MMAR_5328|M.marinum_M -QVVSAARPALDAWHR-RGMEGDVPLGPASMPARVAVSVFSIEFLVHAWD MUL_4409|M.ulcerans_Agy99 -QVVSAARPALDAWHR-RGMDGDVPLGPASMPARVAVSVFSIEFLVHAWD MAV_0248|M.avium_104 -RVIAVARPALDAWRQ-RGLDGTVSFGGGEMPARNACAILALELLVHAWD MSMEG_6832|M.smegmatis_MC2_155 -RVAASTEAVIAVWQR-RGTAGEVVFAGRVMPARLALGVLSVELVVHGWD MAB_4446|M.abscessus_ATCC_1997 -RLLPQSQAVVDAWQR-RGIDGTVTLPIGEYPAEVAVRILGSEFLVHAWD Mflv_1118|M.gilvum_PYR-GCK ESYPSRLASLASAWREPAAWEGMSRAGGVDFPADVGGLIALTEVVVHGWD Mvan_2932|M.vanbaalenii_PYR-1 DAWRQSGRRAADAWSDDAVLERPMALPWIQGSGAEVLASYFSELTVHTWD .* .. *. ** ** Mb3801c|M.bovis_AF2122/97 YAVAVGSELKAADSLAEYVLELARKLIKPE---------------ERSVA Rv3773c|M.tuberculosis_H37Rv YAVAVGSELKAADSLAEYVLELARKLIKPE---------------ERSVA MMAR_5328|M.marinum_M YATAVGHDIHVPDSLADYVLGLAQNLIQPH---------------ERGAA MUL_4409|M.ulcerans_Agy99 YATAVGHDIHVPDSLADYVLGLAQNLIQPH---------------ERGAA MAV_0248|M.avium_104 YARAVGRDARAPEPLAEYVLGLAHRVIRPE---------------VRGQA MSMEG_6832|M.smegmatis_MC2_155 FAQALHRPLGITAAHADFVLAMARHIITPA---------------SRETA MAB_4446|M.abscessus_ATCC_1997 YAVATGQEFEPMDALTDGVLESVRMIIQPE---------------RRDGD Mflv_1118|M.gilvum_PYR-GCK VAVSAGLPYEVDGETLAAVHGHLAAFTADG---------------PVEG- Mvan_2932|M.vanbaalenii_PYR-1 LATATRQQPDWDDTVVAAAFDAARQILPAENRRALYEEISAARGLDEVAV * : . . Mb3801c|M.bovis_AF2122/97 GFNEPVDVPEDGGALERLIAFTGRNPAR-------- Rv3773c|M.tuberculosis_H37Rv GFNEPVDVPEDGGALERLIAFTGRNPAR-------- MMAR_5328|M.marinum_M GFDDPVQVGDDVSGLHRLVAFTGRNPIR-------- MUL_4409|M.ulcerans_Agy99 GFDDPVQVGDDVRGLHRLVAFTGRNPIR-------- MAV_0248|M.avium_104 GFDDPVEVPADADALTKLVAFTGRNPAR-------- MSMEG_6832|M.smegmatis_MC2_155 GFDDPVSVAADAAALDRLVAYTGRTPRRWPSNMKSR MAB_4446|M.abscessus_ATCC_1997 FFADEVPVPDDSPNLVKLIAFTGRNPGWSPAS---- Mflv_1118|M.gilvum_PYR-GCK LFDAPVPVPDDAPLLDRVIAMTGRDPSWSAA----- Mvan_2932|M.vanbaalenii_PYR-1 PFAEAVPISDDAPAIDRLVAWNGRDPLRRF------ * * : * : :::* .** *