For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGGLTISDLVVEYSSGGYAVRPIDGLSLDVAPGSLVILLGPSGCGKTTLLSCLGGILRPKSGSIKFDDVD ITTLEGAALAKYRRDKVGIVFQAFNLVSSLTALENVMVPLRAAGVSRAAARKRAEDLLIRVNLGERMKHR PGDMSGGQQQRVAVARAIALDPQLILADEPTAHLDFIQVEEVLRLIRSLAQGDRVVVVATHDSRMLPLAD RVLELMPAQVSPNQPPETVHVKAGEVLFEQSTMGDLIYVVSEGEFEIVRELADGGEELVKTAAPGDYFGE IGVLFHLPRSATVRARSDATAVGYTAQAFRERLGVTRVADLIEHRELASE
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2593 | glnQ | - | 100% (330) | glutamine-transport ATP-binding protein ABC transporter GlnQ |
| M. bovis AF2122 / 97 | Mb0074 | - | e-119 | 82.31% (260) | glutamine-transport ATP-binding protein ABC transporter GlnQ |
| M. bovis AF2122 / 97 | Mb1012 | - | 1e-40 | 39.06% (233) | adhesion component transport ATP-binding protein ABC |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_4127 | - | 8e-44 | 43.12% (218) | ABC transporter related |
| M. tuberculosis H37Rv | Rv2564 | glnQ | 0.0 | 100.00% (330) | glutamine-transport ATP-binding protein ABC transporter GlnQ |
| M. leprae Br4923 | MLBr_00669 | ftsE | 3e-28 | 33.64% (214) | putative cell division ATP-binding protein |
| M. abscessus ATCC 19977 | MAB_4671c | - | 1e-41 | 43.19% (213) | ABC transporter ATP-binding protein |
| M. marinum M | MMAR_0216 | - | 1e-154 | 83.33% (330) | glutamine-transport ATP-binding protein ABC transporter |
| M. avium 104 | MAV_4425 | - | 1e-47 | 47.27% (220) | ABC-type transporter, ATPase component |
| M. smegmatis MC2 155 | MSMEG_2524 | - | 8e-43 | 42.20% (218) | ABC transporter, ATP-binding protein |
| M. thermoresistible (build 8) | TH_2538 | - | 2e-36 | 40.19% (214) | PUTATIVE ABC transporter related |
| M. ulcerans Agy99 | MUL_0674 | - | 7e-40 | 40.65% (214) | ABC transporter, ATP-binding protein |
| M. vanbaalenii PYR-1 | Mvan_1004 | - | 6e-48 | 45.41% (218) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2593|M.bovis_AF2122/97 ------------------MGGLTISDLVVEYSSGGYAVRPIDGLSLDVAP
Rv2564|M.tuberculosis_H37Rv ------------------MGGLTISDLVVEYSSGGYAVRPIDGLSLDVAP
MMAR_0216|M.marinum_M ------------------MGDLSIQDLVVEYYSGGYALRPINGLNLDVEA
MAV_4425|M.avium_104 -------------------MTIEMAGVVREYRVGGQPVRALDRISLQLAG
Mvan_1004|M.vanbaalenii_PYR-1 --------------------MLEMTDVTKTYRVGGQTVRALDGITLSLCG
MUL_0674|M.ulcerans_Agy99 --------MTRAQAPTSPRGGVSLHGVDKTFGTAAASVHALRRIDLDIEP
Mflv_4127|M.gilvum_PYR-GCK MTVVDETPDTPTGPVADPAPVIEISDVWKLHKLGDEVVKALMAAELTVMP
MSMEG_2524|M.smegmatis_MC2_155 MTALDDT-EAPADNEDSRKPVIEISDVWKLHKLGDEVVKALKAAELQVMP
MAB_4671c|M.abscessus_ATCC_199 -------MNSPERPNVSPEPVLQLKGVAHQYGTGAAAVHALRGLDLTVNT
TH_2538|M.thermoresistible__bu --------------------MIELTDLTKVYGCGEHRTVVLDRINFRVET
MLBr_00669|M.leprae_Br4923 --------------------MITLDHVSKKYKS--LARPALDNVNVKIDK
: : : . : . :
Mb2593|M.bovis_AF2122/97 GSLVILLGPSGCGKTTLLSCLGGILRPKSGSIKFDDVDITTLEGAALAKY
Rv2564|M.tuberculosis_H37Rv GSLVILLGPSGCGKTTLLSCLGGILRPKSGSIKFDDVDITTLEGAALAKY
MMAR_0216|M.marinum_M GSLVILLGPSGCGKTTLLSCLGGILRPKSGAIKFEDIDITTLEGTALAKY
MAV_4425|M.avium_104 GQFVAVVGPSGAGKSTLLHLLGALDSPDSGSILFDGEEIGRLGDEAQSRF
Mvan_1004|M.vanbaalenii_PYR-1 GEFVSVVGPSGAGKSTLLHLLGALDRPDAGSIRFQGAEIAALDDEAQSEF
MUL_0674|M.ulcerans_Agy99 GELVAIVGESGSGKTTLLNVIGGIEEANSGSINVAGQDISGCRPRALSKF
Mflv_4127|M.gilvum_PYR-GCK GEFVCLMGPSGSGKSTLLNIIGGLDRPTKGNVRIAGTDTATLTESQYAAL
MSMEG_2524|M.smegmatis_MC2_155 GEFVCLMGPSGSGKSTLLNIIGGLDRPTKGTVKISGQDTAQLTESQFAAL
MAB_4671c|M.abscessus_ATCC_199 GEVVLVVGPSGGGKTTALLVMGLLLTPVSGLVRIGGRDVGELAERDRAHI
TH_2538|M.thermoresistible__bu GEVLAVVGPSGAGKSTLAQCINLLTRPTSGSVVVNGEDLTTLSTHRLRVA
MLBr_00669|M.leprae_Br4923 GEFVFLIGPSGSGKSTFMRLLLGAETPTSGDVRVSKFHVNKLPGRHIPRL
*..: ::* ** **:* : . * : . .
Mb2593|M.bovis_AF2122/97 RRDKVGIVFQAFNLVSSLTALENVMVPLRAAGVSRAAARKRAEDLLIRVN
Rv2564|M.tuberculosis_H37Rv RRDKVGIVFQAFNLVSSLTALENVMVPLRAAGVSRAAARKRAEDLLIRVN
MMAR_0216|M.marinum_M RRDKVGIVFQAFNLVPSLTALENVMVPLRSAGMSRAAARARAEELLKRVN
MAV_4425|M.avium_104 RHRRVGFVFQFFNLLPTLSAWENVAIPRLLDGVRLGRARPDALRLLERVG
Mvan_1004|M.vanbaalenii_PYR-1 RRHSVGFVFQFFNLLPTMTAWENVAVPKLLDGSRMAKVKSRALDLLAVVG
MUL_0674|M.ulcerans_Agy99 RRDHVGFIFQFFNLIPTLTAKENVEVIVELTG---RGDRRRATELLDAVE
Mflv_4127|M.gilvum_PYR-GCK RHDTIGFIFQSYNLIPFLSAVENVELPLMFEPYDRKALRKRAIELLELVG
MSMEG_2524|M.smegmatis_MC2_155 RHDTIGFIFQSYNLIPFLSAVENVELPLMFEPYDRKSLRTRATELLEMVG
MAB_4671c|M.abscessus_ATCC_199 RLEKLGFLFQEYNLLNALTSAENVALPLRYAGVSKDKAMSRARGLLADVG
TH_2538|M.thermoresistible__bu RR-RIGTVFQSSGLLERRTAAENVALPLEYLGVTAAETRKRVAELLDRVG
MLBr_00669|M.leprae_Br4923 RQ-VIGCVFQDFRLLQQKTVYENVAFALEVIGRRSDAINQVVPDVLETVG
* :* :** *: : *** . . :* *
Mb2593|M.bovis_AF2122/97 LGERMKHRPGDMSGGQQQRVAVARAIALDPQLILADEPTAHLDFIQVEEV
Rv2564|M.tuberculosis_H37Rv LGERMKHRPGDMSGGQQQRVAVARAIALDPQLILADEPTAHLDFIQVEEV
MMAR_0216|M.marinum_M LEERMKHRPGDLSGGQQQRVAVARAIALDPPLILADEPTAHLDFIQVEEV
MAV_4425|M.avium_104 LGNRTEHRPAELSGGQMQRVAVARALMMDPPLILADEPTGNLDSSTGAAI
Mvan_1004|M.vanbaalenii_PYR-1 LGDRAEHRPSELSGGQMQRVAVARALMMDPPLILADEPTGNLDTKTGAAI
MUL_0674|M.ulcerans_Agy99 LADRAGSFPGQLSGGQQQRVAIARALITNPDLLLADEPMGALDVATGRRV
Mflv_4127|M.gilvum_PYR-GCK LGHRINHQPTRMSGGEQQRTAIARSLISNPALVLADEPTANLDHRTGETV
MSMEG_2524|M.smegmatis_MC2_155 LGHRIHHQPTKMSGGEQQRTAIARSLISNPTLVLADEPTANLDHRTGETV
MAB_4671c|M.abscessus_ATCC_199 MEHRTDHRPPALSGGEKQRVAAARALVARPGLVLADEPTANLDSATGKRV
TH_2538|M.thermoresistible__bu LAARANHYPFQLSGGQRQRVGIARALALRPSVLLSDEATAGLDPTTTASV
MLBr_00669|M.leprae_Br4923 LSGKANRLPDELSGGEQQRVAIARAFVNRPLVLLADEPTGNLDPDTSKDI
: : * :***: **.. **:: * ::*:**. . ** :
Mb2593|M.bovis_AF2122/97 LRLIRSLAQGD---RVVVVATHDSR-MLPLADRVLELMPAQVSPNQPPET
Rv2564|M.tuberculosis_H37Rv LRLIRSLAQGD---RVVVVATHDSR-MLPLADRVLELMPAQVSPNQPPET
MMAR_0216|M.marinum_M LRLIRELADGD---RVVVVATHDSR-MLPMADRVVELTPDFAETNRPPEV
MAV_4425|M.avium_104 LELLAEVAHEGGGDRLVVMVTHNSD-AAAATDRVITLQ------------
Mvan_1004|M.vanbaalenii_PYR-1 MALLTDIAHQD--ERSVVMVTHNLG-AASATDRVITLT------------
MUL_0674|M.ulcerans_Agy99 LELLQQTNRSG---LGVIMVTHNRA-AADVADPIIQMR------------
Mflv_4127|M.gilvum_PYR-GCK VRMLRDLCSTM--GVTVVASTHDPT-VADEASRVVRMK------------
MSMEG_2524|M.smegmatis_MC2_155 VRMLRDLCLTL--GVTVVASTHDPT-VADEASRVVRMR------------
MAB_4671c|M.abscessus_ATCC_199 AAQLADAARSQ--GAAVVIVTHDLR-LTDIADRVLHLE------------
TH_2538|M.thermoresistible__bu VELLRELRDDLN--LSIVFITHEMDTVLKIADSVARLDHGRIVEAGRLVD
MLBr_00669|M.leprae_Br4923 MDLLERINRTG---TTVLMATHDHHIVDSMRQRVVELSLG----------
: :: **: . : :
Mb2593|M.bovis_AF2122/97 VHVKAGEVLFEQSTMGDLIYVVSEGEFEIVRELADGGEELVKTAAPGDYF
Rv2564|M.tuberculosis_H37Rv VHVKAGEVLFEQSTMGDLIYVVSEGEFEIVRELADGGEELVKTAAPGDYF
MMAR_0216|M.marinum_M VELKSGDVLFEQSTMGDLIYVVSAGEFEIVHELADGGEELVKVAGPGEYF
MAV_4425|M.avium_104 ----------------------------------DG--------------
Mvan_1004|M.vanbaalenii_PYR-1 ----------------------------------DG--------------
MUL_0674|M.ulcerans_Agy99 ----------------------------------DG--------------
Mflv_4127|M.gilvum_PYR-GCK ----------------------------------DG--------------
MSMEG_2524|M.smegmatis_MC2_155 ----------------------------------DG--------------
MAB_4671c|M.abscessus_ATCC_199 ----------------------------------DG--------------
TH_2538|M.thermoresistible__bu LLTDPASALGADLRPQGAAAPPAPPX----XXRLRGVAGPDHPHRTGAVR
MLBr_00669|M.leprae_Br4923 --------------------------------------------------
Mb2593|M.bovis_AF2122/97 GEIGVLFHLPRSATVRARSDATAVGYTAQAFRERLGVTRVADLIEHRELA
Rv2564|M.tuberculosis_H37Rv GEIGVLFHLPRSATVRARSDATAVGYTAQAFRERLGVTRVADLIEHRELA
MMAR_0216|M.marinum_M GEMGVLFHMPRSATVRARTDATAVGYTAQAFRERLGIGGMRDLIEHRELS
MAV_4425|M.avium_104 ---------------RVGSDVLAVAG------------------------
Mvan_1004|M.vanbaalenii_PYR-1 ---------------RIGSDVLAGGELT----------------------
MUL_0674|M.ulcerans_Agy99 -----------AIVEQRRNSAPAEASSVRW--------------------
Mflv_4127|M.gilvum_PYR-GCK ---------------QIVN-------------------------------
MSMEG_2524|M.smegmatis_MC2_155 ---------------QIIN-------------------------------
MAB_4671c|M.abscessus_ATCC_199 ---------------VLLEKENQ---------------------------
TH_2538|M.thermoresistible__bu AAGRTGPAAARRCGGGTAVDAGSDRRVADRAGRRPGRRDDAVAAPRRRPI
MLBr_00669|M.leprae_Br4923 ---------------RLVRDEWCGIYGMDR--------------------
Mb2593|M.bovis_AF2122/97 SE
Rv2564|M.tuberculosis_H37Rv SE
MMAR_0216|M.marinum_M ND
MAV_4425|M.avium_104 --
Mvan_1004|M.vanbaalenii_PYR-1 --
MUL_0674|M.ulcerans_Agy99 --
Mflv_4127|M.gilvum_PYR-GCK --
MSMEG_2524|M.smegmatis_MC2_155 --
MAB_4671c|M.abscessus_ATCC_199 --
TH_2538|M.thermoresistible__bu RP
MLBr_00669|M.leprae_Br4923 --