For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TRAQAPTSPRGGVSLHGVDKTFGTAAASVHALRRIDLDIEPGELVAIVGESGSGKTTLLNVIGGIEEANS GSINVAGQDISGCRPRALSKFRRDHVGFIFQFFNLIPTLTAKENVEVIVELTGRGDRRRATELLDAVELA DRAGSFPGQLSGGQQQRVAIARALITNPDLLLADEPMGALDVATGRRVLELLQQTNRSGLGVIMVTHNRA AADVADPIIQMRDGAIVEQRRNSAPAEASSVRW*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_0674 | - | - | 100% (244) | ABC transporter, ATP-binding protein |
| M. ulcerans Agy99 | MUL_2409 | ftsE | 1e-32 | 37.50% (224) | cell division ATP-binding protein FtsE |
| M. ulcerans Agy99 | MUL_4001 | oppD | 4e-32 | 38.39% (224) | oligopeptide-transport ATP-binding protein ABC transporter |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1012 | - | 3e-48 | 44.68% (235) | adhesion component transport ATP-binding protein ABC |
| M. gilvum PYR-GCK | Mflv_4127 | - | 6e-42 | 40.85% (235) | ABC transporter related |
| M. tuberculosis H37Rv | Rv0986 | - | 3e-48 | 44.68% (235) | adhesion component transport ATP-binding protein ABC |
| M. leprae Br4923 | MLBr_00669 | ftsE | 2e-32 | 35.16% (219) | putative cell division ATP-binding protein |
| M. abscessus ATCC 19977 | MAB_4671c | - | 2e-42 | 42.04% (226) | ABC transporter ATP-binding protein |
| M. marinum M | MMAR_0922 | - | 1e-131 | 98.36% (244) | ABC transporter, ATP-binding protein |
| M. avium 104 | MAV_4425 | - | 9e-46 | 46.36% (220) | ABC-type transporter, ATPase component |
| M. smegmatis MC2 155 | MSMEG_2524 | - | 9e-43 | 44.83% (203) | ABC transporter, ATP-binding protein |
| M. thermoresistible (build 8) | TH_4101 | - | 1e-48 | 45.09% (224) | PUTATIVE putative ABC transporter, ATP-binding protein |
| M. vanbaalenii PYR-1 | Mvan_1004 | - | 2e-45 | 46.95% (213) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_0674|M.ulcerans_Agy99 --------MTRAQAPTSPRGGVSLHGVDKTFGTAAASVHALRRIDLDIEP
MMAR_0922|M.marinum_M --------MTRAQAPTSPRGGVSLHGVDKTFGTAAASVHALRGIDLDIEP
MAV_4425|M.avium_104 -------------------MTIEMAGVVREYRVGGQPVRALDRISLQLAG
Mvan_1004|M.vanbaalenii_PYR-1 --------------------MLEMTDVTKTYRVGGQTVRALDGITLSLCG
Mflv_4127|M.gilvum_PYR-GCK MTVVDETPDTPTGPVADPAPVIEISDVWKLHKLGDEVVKALMAAELTVMP
MSMEG_2524|M.smegmatis_MC2_155 MTALDDT-EAPADNEDSRKPVIEISDVWKLHKLGDEVVKALKAAELQVMP
MAB_4671c|M.abscessus_ATCC_199 -------MNSPERPNVSPEPVLQLKGVAHQYGTGAAAVHALRGLDLTVNT
Mb1012|M.bovis_AF2122/97 ---------------MNRQPIVQLSNLSWTFREGETRRQVLDHITFDFEP
Rv0986|M.tuberculosis_H37Rv ---------------MNRQPIVQLSNLSWTFREGETRRQVLDHITFDFEP
TH_4101|M.thermoresistible__bu ---------VTDSGEDRDTAVIEARDLCKSFGQGAAETPILKHVDVRISP
MLBr_00669|M.leprae_Br4923 --------------------MITLDHVSKKYKS--LARPALDNVNVKIDK
: : . * . .
MUL_0674|M.ulcerans_Agy99 GELVAIVGESGSGKTTLLNVIGGIEEANSGSINVAGQDISGCRPRALSKF
MMAR_0922|M.marinum_M GELVAIVGESGSGKTTLLNVIGGIEEANSGSINVAGQDISGCRPRALSKF
MAV_4425|M.avium_104 GQFVAVVGPSGAGKSTLLHLLGALDSPDSGSILFDGEEIGRLGDEAQSRF
Mvan_1004|M.vanbaalenii_PYR-1 GEFVSVVGPSGAGKSTLLHLLGALDRPDAGSIRFQGAEIAALDDEAQSEF
Mflv_4127|M.gilvum_PYR-GCK GEFVCLMGPSGSGKSTLLNIIGGLDRPTKGNVRIAGTDTATLTESQYAAL
MSMEG_2524|M.smegmatis_MC2_155 GEFVCLMGPSGSGKSTLLNIIGGLDRPTKGTVKISGQDTAQLTESQFAAL
MAB_4671c|M.abscessus_ATCC_199 GEVVLVVGPSGGGKTTALLVMGLLLTPVSGLVRIGGRDVGELAERDRAHI
Mb1012|M.bovis_AF2122/97 GEFVALLGQSGSGKSTLLNLISGIEKPTTGDVTINGFAITQKTERDRTLF
Rv0986|M.tuberculosis_H37Rv GEFVALLGQSGSGKSTLLNLISGIEKPTTGDVTINGFAITQKTERDRTLF
TH_4101|M.thermoresistible__bu GEFVVLIGPSGSGKSTLLSILGLLEPPSSGRLFVDQQDVSGLSRRQLARL
MLBr_00669|M.leprae_Br4923 GEFVFLIGPSGSGKSTFMRLLLGAETPTSGDVRVSKFHVNKLPGRHIPRL
*:.* ::* **.**:* : :: . * : . . :
MUL_0674|M.ulcerans_Agy99 RRDHVGFIFQFFNLIPTLTAKENVEVIVELTG-RGDRRR--ATELLDAVE
MMAR_0922|M.marinum_M RRDHVGFIFQFFNLIPTLTAKENVEVIVELTG-RGDRRR--ATELLDAVG
MAV_4425|M.avium_104 RHRRVGFVFQFFNLLPTLSAWENVAIPRLLDGVRLGRARPDALRLLERVG
Mvan_1004|M.vanbaalenii_PYR-1 RRHSVGFVFQFFNLLPTMTAWENVAVPKLLDGSRMAKVKSRALDLLAVVG
Mflv_4127|M.gilvum_PYR-GCK RHDTIGFIFQSYNLIPFLSAVENVELPLMFEPYDRKALRKRAIELLELVG
MSMEG_2524|M.smegmatis_MC2_155 RHDTIGFIFQSYNLIPFLSAVENVELPLMFEPYDRKSLRTRATELLEMVG
MAB_4671c|M.abscessus_ATCC_199 RLEKLGFLFQEYNLLNALTSAENVALPLRYAGVSKDKAMSRARGLLADVG
Mb1012|M.bovis_AF2122/97 RRDQIGIVFQFFNLIPTLTVLENITLPQELAGVSQRKAAVVARDLLEKVG
Rv0986|M.tuberculosis_H37Rv RRDQIGIVFQFFNLIPTLTVLENITLPQELAGVSQRKAAVVARDLLEKVG
TH_4101|M.thermoresistible__bu RGRKLGYVFQSFNLLAGLSVAENVMLSGLLVGESGRAQYERAVELLDEFG
MLBr_00669|M.leprae_Br4923 R-QVIGCVFQDFRLLQQKTVYENVAFALEVIGRRSDAINQVVPDVLETVG
* :* :** :.*: : **: . . :* .
MUL_0674|M.ulcerans_Agy99 LADRAGSFPGQLSGGQQQRVAIARALITNPDLLLADEPMGALDVATGRRV
MMAR_0922|M.marinum_M LADRAGSFPGQLSGGQQQRVAIARALITDPDLLLADEPMGALDVATGRRV
MAV_4425|M.avium_104 LGNRTEHRPAELSGGQMQRVAVARALMMDPPLILADEPTGNLDSSTGAAI
Mvan_1004|M.vanbaalenii_PYR-1 LGDRAEHRPSELSGGQMQRVAVARALMMDPPLILADEPTGNLDTKTGAAI
Mflv_4127|M.gilvum_PYR-GCK LGHRINHQPTRMSGGEQQRTAIARSLISNPALVLADEPTANLDHRTGETV
MSMEG_2524|M.smegmatis_MC2_155 LGHRIHHQPTKMSGGEQQRTAIARSLISNPTLVLADEPTANLDHRTGETV
MAB_4671c|M.abscessus_ATCC_199 MEHRTDHRPPALSGGEKQRVAAARALVARPGLVLADEPTANLDSATGKRV
Mb1012|M.bovis_AF2122/97 MADRERTFPDKLSGGEQQRVAISRALAHNPMLVLADEPTGNLDSDTGDKV
Rv0986|M.tuberculosis_H37Rv MADRERTFPDKLSGGEQQRVAISRALAHNPMLVLADEPTGNLDSDTGDKV
TH_4101|M.thermoresistible__bu LADKARRVPAELSGGEQQRVAIARALFMRPDVILADEPTGNLDTKNGRIV
MLBr_00669|M.leprae_Br4923 LSGKANRLPDELSGGEQQRVAIARAFVNRPLVLLADEPTGNLDPDTSKDI
: : * :***: **.* :*:: * ::***** . ** .. :
MUL_0674|M.ulcerans_Agy99 LELLQQTNRSG---LGVIMVTHNRAAADVA-DPIIQMRDGAIVEQRRNSA
MMAR_0922|M.marinum_M LELLQQTNRSG---LGVIMVTHNRAAADVA-DRIIQMRDGAIVEQRRNSA
MAV_4425|M.avium_104 LELLAEVAHEGGGDRLVVMVTHNSDAAAAT-DRVITLQDGRVG----SDV
Mvan_1004|M.vanbaalenii_PYR-1 MALLTDIAHQD--ERSVVMVTHNLGAASAT-DRVITLTDGRIG----SDV
Mflv_4127|M.gilvum_PYR-GCK VRMLRDLCSTM--GVTVVASTHDPTVADEA-SRVVRMKDGQIVN------
MSMEG_2524|M.smegmatis_MC2_155 VRMLRDLCLTL--GVTVVASTHDPTVADEA-SRVVRMRDGQIIN------
MAB_4671c|M.abscessus_ATCC_199 AAQLADAARSQ--GAAVVIVTHDLRLTDIA-DRVLHLEDGVLLEKENQ--
Mb1012|M.bovis_AF2122/97 LDVLLDLTRQA--GKTLIMATHSPSMTQHA-DRVVNLQGGRLIPALNREN
Rv0986|M.tuberculosis_H37Rv LDVLLDLTRQA--GKTLIMATHSPSMTQHA-DRVVNLQGGRLIPAVNREN
TH_4101|M.thermoresistible__bu LDTLKKLNAAG---QTIVMVTHDLSIAEEA-PRLIAFRDGRIESDSAVPA
MLBr_00669|M.leprae_Br4923 MDLLERINRTG---TTVLMATHDHHIVDSMRQRVVELSLGRLVRDEWCGI
* :: **. . :: : * :
MUL_0674|M.ulcerans_Agy99 PAEASSVRW---------------
MMAR_0922|M.marinum_M PAEASSVRW---------------
MAV_4425|M.avium_104 LAVAG-------------------
Mvan_1004|M.vanbaalenii_PYR-1 LAGGELT-----------------
Mflv_4127|M.gilvum_PYR-GCK ------------------------
MSMEG_2524|M.smegmatis_MC2_155 ------------------------
MAB_4671c|M.abscessus_ATCC_199 ------------------------
Mb1012|M.bovis_AF2122/97 QTDQPASTILLPTSYE--------
Rv0986|M.tuberculosis_H37Rv QTDQPASTILLPTSYE--------
TH_4101|M.thermoresistible__bu SGAAAETQSAEPDGVVVMLRKTGR
MLBr_00669|M.leprae_Br4923 YGMDR-------------------