For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSSTATSGAAVVSPAERVEVLFEELAELAGQRNAIDGRIVEIVAELDRDGLWGVTGARSVAGLVAWKMGC SSGNAHTIATVARRLPEFPRCARGMREGRLSLDQVGVIAGRAGEGSDAHYAQLAGVATVNQLRTALKLEP RPEPEPDFRPEPRPSITRSADEQFSCWRIKLPHVEAAKFDAALQSHLDALIAEYKRDHDNSDGVSDQRPP LPGNVEAFLRLVEAGWDAEVARRPHGQHTTVVMHLDVQERAAGLHLGPLLSESERRYLLCDATFEAWFER DGQVIGCGRTTRQINRRLRRALEHRDRTCVVPGCGATRGLHAHHIRHWQDGGATELANLVLVCPYHHRAH HRGLITITGPADNLTVADSAGRPLSAGSLARASTKPPPAVAPWPGPTGERADWWWYEPFQPQPPPISN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1794c | - | - | 100% (418) | hypothetical protein Mb1794c |
M. bovis AF2122 / 97 | Mb2038c | - | 0.0 | 99.76% (418) | hypothetical protein Mb2038c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1988 | - | 1e-159 | 65.00% (420) | hypothetical protein Mflv_1988 |
M. tuberculosis H37Rv | Rv2015c | - | 0.0 | 100.00% (418) | hypothetical protein Rv2015c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2374c | - | 2e-09 | 27.52% (218) | hypothetical protein MAB_2374c |
M. marinum M | MMAR_0868 | - | 2e-08 | 25.23% (325) | hypothetical protein MMAR_0868 |
M. avium 104 | MAV_4292 | - | 0.0 | 76.94% (399) | hypothetical protein MAV_4292 |
M. smegmatis MC2 155 | MSMEG_3404 | - | 1e-160 | 64.11% (418) | HNH endonuclease domain-containing protein |
M. thermoresistible (build 8) | TH_1926 | - | 4e-43 | 71.43% (105) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0040 | - | 1e-167 | 66.97% (436) | hypothetical protein Mvan_0040 |
CLUSTAL 2.0.9 multiple sequence alignment Mb1794c|M.bovis_AF2122/97 -------------------MSSTATSGAAVVSPAERVEVLFEELAELAGQ Rv2015c|M.tuberculosis_H37Rv -------------------MSSTATSGAAVVSPAERVEVLFEELAELAGQ MAV_4292|M.avium_104 --------------------------------------MLFEELAELTGQ Mflv_1988|M.gilvum_PYR-GCK ------------------MRPGSAPSFIPSPPREARLEALFDELSELAGQ Mvan_0040|M.vanbaalenii_PYR-1 ------------------MSSTVVDSPAGCTQSE-RLEVLFEELSELAGQ MSMEG_3404|M.smegmatis_MC2_155 ------------------MTS-AATSPAAQPTPVERLEALFDALAELTGQ TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_2374c|M.abscessus_ATCC_199 MSSIADSDAAEVLAGLCGAVDALSELDTSALTRHDRLTILRDVETLLRRI MMAR_0868|M.marinum_M MRSIAG-----LLDALDAAVAAIGEAHLEGLQPVERLRMLARLETARRLQ Mb1794c|M.bovis_AF2122/97 RNAIDGRIVEIVAELDRDGLWGVTGARSVAGLVAWKMGCSSGNAHTIATV Rv2015c|M.tuberculosis_H37Rv RNAIDGRIVEIVAELDRDGLWGVTGARSVAGLVAWKMGCSSGNAHTIATV MAV_4292|M.avium_104 RNAIDGRIVDIVAEIDRDELCGITGARSVPALVAWKTGCSPANAHTIATI Mflv_1988|M.gilvum_PYR-GCK RNAIDGRIVDIVAEIDGDQLWGATGARSIAALVAWKLGTSAGNAERIVAI Mvan_0040|M.vanbaalenii_PYR-1 RNAIDGRIVEIAAQIDRDGLVGITGARSVAALVAWKTGCSPHNAKTITTV MSMEG_3404|M.smegmatis_MC2_155 RNAIDAKIVQIVAEIDRDGLWGATGARSISALVAWKTGASERNAKAIAAV TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_2374c|M.abscessus_ATCC_199 PTATHGIVNELVAGHVPGQFGGASLGDVLADTLRITRADARRRIRDAAEL MMAR_0868|M.marinum_M AVISHDVIAGLYT-EDPAAIGGP-VTKVVADWLRITPTDARRRLRDAQQL Mb1794c|M.bovis_AF2122/97 ARR--------LPEFPRCARGMREGRLSLDQVGVIAGRAGEGSDAHYAQL Rv2015c|M.tuberculosis_H37Rv ARR--------LPEFPRCARGMREGRLSLDQVGVIAGRAGEGSDAHYAQL MAV_4292|M.avium_104 AAR--------LPEFPRCAQGMREGWLSLDQVGVIAARGGAGSDEHYVEL Mflv_1988|M.gilvum_PYR-GCK ADR--------AAEFPRCTQALREGRLSVDQVGVIAEGAGQGSDDHYARL Mvan_0040|M.vanbaalenii_PYR-1 ADR--------LEEFPRCVTALGEGRLSLDQVAVIAEHAGQGSDAHYAHL MSMEG_3404|M.smegmatis_MC2_155 AHR--------AEEFPRCVQGLGAGRLSLDQVGVIAEGAADGSDEHYAAL TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_2374c|M.abscessus_ATCC_199 APTVALTGTSIEPVLAATSAAQRAGTAGGDHIAVIRRFWDRVPRTVDVQT MMAR_0868|M.marinum_M SARTTLTGQVLPPELPATARAWRDGQLDGQHLRVIATFVRDLPQDTAPQI Mb1794c|M.bovis_AF2122/97 AGVATVNQLRTALKLEPRPEPEPDFRPE------------------PRPS Rv2015c|M.tuberculosis_H37Rv AGVATVNQLRTALKLEPRPEPEPDFRPE------------------PRPS MAV_4292|M.avium_104 ARVATVSQLRTAVKLEPRPEPEP--QRE------------------PERA Mflv_1988|M.gilvum_PYR-GCK AQNASVSQLRTAIKQEPRPEPEPSADDGDEPDHDLPDHDEPEPPSLPTAE Mvan_0040|M.vanbaalenii_PYR-1 AASASVSQLRTAVKSEPRPDPEPVRDPFADAD------EEPEPAPVPRPE MSMEG_3404|M.smegmatis_MC2_155 ASVATVSQLRKAISLEPKPEPEPKPD--------------------PRRS TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_2374c|M.abscessus_ATCC_199 RMTAERQLARLTQTLRPDELGKAAQRLLAHLDPDGSLTSDTDRARRRGFR MMAR_0868|M.marinum_M VAGAEKLLAHQALQLRPDQLEKAAHRCALLINPDGRFS-DADRARQRGFT Mb1794c|M.bovis_AF2122/97 ITRSADEQFSCWRIKLPHVEAAKFDAALQSHLDALIAEYKRDH------- Rv2015c|M.tuberculosis_H37Rv ITRSADEQFSCWRIKLPHVEAAKFDAALQSHLDALIAEYKRDH------- MAV_4292|M.avium_104 FTRTSTEQGSCYRITLAHDEAAKFDAALQSHLDALIAEWEHDR------- Mflv_1988|M.gilvum_PYR-GCK ITTSCDADYTYWRIKLPHEQAATFQAALHSHKDALIAQWTREH------- Mvan_0040|M.vanbaalenii_PYR-1 ITSTCDADYTYWRIKLPHEQSARFTAALQSHKDRLIAQHTRDHGTDPTG- MSMEG_3404|M.smegmatis_MC2_155 IRTNPGDGYTTYHITLPRLEAAKFDTALEASHEGLIARWEREQ------- TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_2374c|M.abscessus_ATCC_199 MGRQGADLMTAGAFDLDPELRSYLDAIFAKYAAPGVCHPDDENPCVDGDP MMAR_0868|M.marinum_M WCAQRRDGMSIGKLIATPELRANLDAWLARFAAPGMCNPDNQTPCVTDEP Mb1794c|M.bovis_AF2122/97 DNSDGVSDQRPPLPGNVEAFLRLVEAGWDAEVARRPHGQHTTVVMHLDVQ Rv2015c|M.tuberculosis_H37Rv DNSDGVSDQRPPLPGNVEAFLRLVEAGWDAEVARRPHGQHTTVVMHLDVQ MAV_4292|M.avium_104 DNTERVFDQRPPLPDSLDAFMRLVETGWDAEAARRPHGQHTTVVMHLDIA Mflv_1988|M.gilvum_PYR-GCK -ADSDEGPHRPPLPNLAEAFLALVEASWDAEALRRPHGQHTTVVVHVDVE Mvan_0040|M.vanbaalenii_PYR-1 DGDGDRGVQLPPWPSAGEAFMELVEAGWDAEATRRPHGQHTTVVVHVDID MSMEG_3404|M.smegmatis_MC2_155 ----DPGDPAVPMPDLVDAFMALVETGWDREATRRPHGQHTAVAVHVDLK TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_2374c|M.abscessus_ATCC_199 DSDAARHDVRSVAQRQHDALKAVCRSILCSGELGHHRGLPVTTIVTTTLR MMAR_0868|M.marinum_M TEDAAATDARRPAQRQHDALNALVRGQLGDPALGTHNGLPVTVIVSTTLQ Mb1794c|M.bovis_AF2122/97 ERAAGLHLGP-------LLSESERRYLLCDATFEAWFERDGQVIGCGRTT Rv2015c|M.tuberculosis_H37Rv ERAAGLHLGP-------LLSESERRYLLCDATFEAWFERDGQVIGCGRTT MAV_4292|M.avium_104 QRLAALNLGP-------LLTDAERQYLTCDATCEVWFERDGQPIGAGRTT Mflv_1988|M.gilvum_PYR-GCK SKLAALHLGP-------LLTAEERRYLSCEATCEVWFERHGRPIGAGRST Mvan_0040|M.vanbaalenii_PYR-1 TRVAALHLGP-------LLTDEERRFLLCDATCEVWFQRHGRPLGTGRST MSMEG_3404|M.smegmatis_MC2_155 SKVAALHLGP-------LLGDDERRLLTCDATCEVWFELRGRVIGTGRAT TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_2374c|M.abscessus_ATCC_199 ELESGAGHAATGGGSLLPMPDPIRMASHAHHYLAVFDDDG-RALYLGRAK MMAR_0868|M.marinum_M EITAATGRAVTGGGTLLPMRDVIRMARHAYHYLAVFDEHSNRPLYLGRTR Mb1794c|M.bovis_AF2122/97 RQINRRLRRALEHRDRTCVVPGCGATR-GLHAHHIRHWQDGGATELANLV Rv2015c|M.tuberculosis_H37Rv RQINRRLRRALEHRDRTCVVPGCGATR-GLHAHHIRHWQDGGATELANLV MAV_4292|M.avium_104 RVINRRLRRALEHRHPTCAVPGCGATR-GLHAHHLRHWEDGGPTELANLV Mflv_1988|M.gilvum_PYR-GCK RTVNRRLRRALEHRDRSCVVPGCGATR-GLHAHHIVHWEDGGDTELDNLV Mvan_0040|M.vanbaalenii_PYR-1 RTINRRLRRALEHRDRTCVVPGCGATR-GLHAHHLVHWEDGGDTELDNLV MSMEG_3404|M.smegmatis_MC2_155 RTVNRRLRRALEHRDRCCVVPGCSATR-GLHAHHLVHWEDGGLTEMANLV TH_1926|M.thermoresistible__bu -------------------VPGCGATR-GLHAHHIRHWEHRGPTDLDNLV MAB_2374c|M.abscessus_ATCC_199 RIATADQRIVLTAKERGCTYPGCDRPAYHCQAHHMDEWAAGGNTDIASLT MMAR_0868|M.marinum_M RIASPDQRVVLYAAERGCTHPGCDAPGYWCEVHHLADWAAGGPTDVDNLT ***. . ..**: .* * *:: .*. Mb1794c|M.bovis_AF2122/97 LVCPYHHRAHHRGLITITGPADNLTVADSAGRPLSAGSLARASTKPPPAV Rv2015c|M.tuberculosis_H37Rv LVCPYHHRAHHRGLITITGPADNLTVADSAGRPLSAGSLARASTKPPPAV MAV_4292|M.avium_104 LVCPYHHRLHHRGIITITGPADALTVTDSDGRPLSPGSLARPPTQPPPAV Mflv_1988|M.gilvum_PYR-GCK LVCPYHHRAHHRGIIVITGPAHQLAVTDHTGRPLQSGTLARPPTQPPPAV Mvan_0040|M.vanbaalenii_PYR-1 LVCPYHHRTHHRGLITITGPAHQLLVTDHTGRPLQPGSLARPPTTPPPEV MSMEG_3404|M.smegmatis_MC2_155 LLCPYHHRAHHRGLITITGPADQLTVTDDRGRLLTNQSLARTPTTPPPTV TH_1926|M.thermoresistible__bu LVCRYHHRLHHRGLITISDTPDNLTVSDRDGDRLHPGSLARPPDRPPPQV MAB_2374c|M.abscessus_ATCC_199 LGCERHHKLLGT---------------DHQCWQTIRGPDGRTWWIPPAHV MMAR_0868|M.marinum_M FACTPHHRLAG------------------KSWQTIKLPNSRTAWLPPPQL : * **: . .*. **. : Mb1794c|M.bovis_AF2122/97 APWPGPTGERADWWWYEPFQPQPPPISN----- Rv2015c|M.tuberculosis_H37Rv APWPGPTGERADWWWYEPFQPQPPPISN----- MAV_4292|M.avium_104 PPCPGPLGERADWWWYDPFQPQPPPTNN----- Mflv_1988|M.gilvum_PYR-GCK PPYRGPSGERLYWKWYHPYQPPPTATAN----- Mvan_0040|M.vanbaalenii_PYR-1 NPYPGTSGERAQWKWYHPYQPPPPTSNN----- MSMEG_3404|M.smegmatis_MC2_155 PPCPGPLGERAQWWWYQPFEPQPPPSAN----- TH_1926|M.thermoresistible__bu APCTGPTGERADWWWYTPYQPPAPPPADETGPG MAB_2374c|M.abscessus_ATCC_199 DPYRTPRSN----WFHHPDGYLRE--------- MMAR_0868|M.marinum_M R--RGARTN----DYHHPERLLDDRAAPD---- . : :: *