For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTSAATSPAAQPTPVERLEALFDALAELTGQRNAIDAKIVQIVAEIDRDGLWGATGARSISALVAWKTGA SERNAKAIAAVAHRAEEFPRCVQGLGAGRLSLDQVGVIAEGAADGSDEHYAALASVATVSQLRKAISLEP KPEPEPKPDPRRSIRTNPGDGYTTYHITLPRLEAAKFDTALEASHEGLIARWEREQDPGDPAVPMPDLVD AFMALVETGWDREATRRPHGQHTAVAVHVDLKSKVAALHLGPLLGDDERRLLTCDATCEVWFELRGRVIG TGRATRTVNRRLRRALEHRDRCCVVPGCSATRGLHAHHLVHWEDGGLTEMANLVLLCPYHHRAHHRGLIT ITGPADQLTVTDDRGRLLTNQSLARTPTTPPPTVPPCPGPLGERAQWWWYQPFEPQPPPSAN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3404 | - | - | 100% (412) | HNH endonuclease domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1794c | - | 1e-160 | 64.11% (418) | hypothetical protein Mb1794c |
M. gilvum PYR-GCK | Mflv_1988 | - | 1e-152 | 62.50% (432) | hypothetical protein Mflv_1988 |
M. tuberculosis H37Rv | Rv2015c | - | 1e-160 | 64.11% (418) | hypothetical protein Rv2015c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0394c | - | 1e-08 | 34.69% (98) | hypothetical protein MAB_0394c |
M. marinum M | MMAR_0868 | - | 2e-06 | 34.88% (86) | hypothetical protein MMAR_0868 |
M. avium 104 | MAV_0036 | - | 1e-160 | 63.77% (414) | hypothetical protein MAV_0036 |
M. thermoresistible (build 8) | TH_1926 | - | 8e-39 | 62.96% (108) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_2371 | - | 6e-05 | 33.78% (74) | hypothetical protein MUL_2371 |
M. vanbaalenii PYR-1 | Mvan_0040 | - | 1e-152 | 62.84% (436) | hypothetical protein Mvan_0040 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_1988|M.gilvum_PYR-GCK -----------------MRPGSAPSFIPSPPREARLEALFDELSELAGQR Mvan_0040|M.vanbaalenii_PYR-1 -----------------MSSTVVDSPAGCTQSE-RLEVLFEELSELAGQR MSMEG_3404|M.smegmatis_MC2_155 -----------------MTS-AATSPAAQPTPVERLEALFDALAELTGQR Mb1794c|M.bovis_AF2122/97 -----------------MSS-TATSGAAVVSPAERVEVLFEELAELAGQR Rv2015c|M.tuberculosis_H37Rv -----------------MSS-TATSGAAVVSPAERVEVLFEELAELAGQR MAV_0036|M.avium_104 -----------------MSS-SVLAAEVEVRPYDRLAVLFDELAELTGQR TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 ------------MSPIDDLLTTATAVVESSFDELNNPELLSALRQLEIAQ MUL_2371|M.ulcerans_Agy99 MHSNGCSDRESVVATLDRLDRAVDALVEVSFEALTTPERLRVLERLEVVA MMAR_0868|M.marinum_M --------MRSIAGLLDALDAAVAAIGEAHLEGLQPVERLRMLARLETAR Mflv_1988|M.gilvum_PYR-GCK NAIDGRIVDIVAEIDGDQLWGATGARSIAALVAWKLGTSAGNAERIVAIA Mvan_0040|M.vanbaalenii_PYR-1 NAIDGRIVEIAAQIDRDGLVGITGARSVAALVAWKTGCSPHNAKTITTVA MSMEG_3404|M.smegmatis_MC2_155 NAIDAKIVQIVAEIDRDGLWGATGARSISALVAWKTGASERNAKAIAAVA Mb1794c|M.bovis_AF2122/97 NAIDGRIVEIVAELDRDGLWGVTGARSVAGLVAWKMGCSSGNAHTIATVA Rv2015c|M.tuberculosis_H37Rv NAIDGRIVEIVAELDRDGLWGVTGARSVAGLVAWKMGCSSGNAHTIATVA MAV_0036|M.avium_104 NAIDGRIVEIVAQIEREQLWGATGARSLGALVAWKTGCSPGNAETIATVA TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 RKITAASHTLTARLVQRGSPVALGGTSFAEVLARYLSITTATARRRLADA MUL_2371|M.ulcerans_Agy99 RRLPAAQYALVNQLDEQPGEAELGGR-LAAVVASRLRITRSEAGRRVAEA MMAR_0868|M.marinum_M RLQAVISHDVIAGLYTED-PAAIGGP-VTKVVADWLRITPTDARRRLRDA Mflv_1988|M.gilvum_PYR-GCK DRA------------AEFPRCTQALREGRLSVDQVGVIAEGAGQGSDDHY Mvan_0040|M.vanbaalenii_PYR-1 DRL------------EEFPRCVTALGEGRLSLDQVAVIAEHAGQGSDAHY MSMEG_3404|M.smegmatis_MC2_155 HRA------------EEFPRCVQGLGAGRLSLDQVGVIAEGAADGSDEHY Mb1794c|M.bovis_AF2122/97 RRL------------PEFPRCARGMREGRLSLDQVGVIAGRAGEGSDAHY Rv2015c|M.tuberculosis_H37Rv RRL------------PEFPRCARGMREGRLSLDQVGVIAGRAGEGSDAHY MAV_0036|M.avium_104 RRL------------DSFPRCAAGLREGRFSLDQLGVIAQRAGEGSDEHY TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 AHLGPRRALTGEPLRPALPYVAHALREGRLGDEHVRIIRRFFDVLPDAVD MUL_2371|M.ulcerans_Agy99 AEVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFFRQLPAGVD MMAR_0868|M.marinum_M QQLSARTTLTGQVLPPELPATARAWRDGQLDGQHLRVIATFVRDLPQDTA Mflv_1988|M.gilvum_PYR-GCK ARLAQNASVSQLRTAIKQEPRPEPEPSADDGDEPDHDLPDHDEPEPPSLP Mvan_0040|M.vanbaalenii_PYR-1 AHLAASASVSQLRTAVKSEPRPDPEPVRDPFADAD------EEPEPAPVP MSMEG_3404|M.smegmatis_MC2_155 AALASVATVSQLRKAISLEPKPEPEPKPD--------------------P Mb1794c|M.bovis_AF2122/97 AQLAGVATVNQLRTALKLEPRPEPEPDFRPE------------------P Rv2015c|M.tuberculosis_H37Rv AQLAGVATVNQLRTALKLEPRPEPEPDFRPE------------------P MAV_0036|M.avium_104 AQLAGVATVNQLRTAVKLEPRPQPE--AKPA------------------P TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 ADTREAAEKQLASMGTEFGPEQLRAGADRIAALVNPD-GRFSDIDRARRR MUL_2371|M.ulcerans_Agy99 VGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPD-GRHSDEDRARRR MMAR_0868|M.marinum_M PQIVAGAEKLLAHQALQLRPDQLEKAAHRCALLINPD-GRFSDADRARQR Mflv_1988|M.gilvum_PYR-GCK TAEITTSCDADYTYWRIKLPHEQAATFQAALHSHKDALIAQWTREH---- Mvan_0040|M.vanbaalenii_PYR-1 RPEITSTCDADYTYWRIKLPHEQSARFTAALQSHKDRLIAQHTRDHGTDP MSMEG_3404|M.smegmatis_MC2_155 RRSIRTNPGDGYTTYHITLPRLEAAKFDTALEASHEGLIARWEREQ---- Mb1794c|M.bovis_AF2122/97 RPSITRSADEQFSCWRIKLPHVEAAKFDAALQSHLDALIAEYKRDHD--- Rv2015c|M.tuberculosis_H37Rv RPSITRSADEQFSCWRIKLPHVEAAKFDAALQSHLDALIAEYKRDHD--- MAV_0036|M.avium_104 QPGLTKTSDEELSCWRITLDRLDAATFDAALAAHREALIAEWKRDHN--- TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 GISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDPRDESPMTE MUL_2371|M.ulcerans_Agy99 GLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNPEDEAAVVD MMAR_0868|M.marinum_M GFTWCAQRRDGMSIGKLIATPELRANLDAWLARFAAPGMCNPDNQTPCVT Mflv_1988|M.gilvum_PYR-GCK ----ADSDEGPHRPPLPNLAEAFLALVEASWDAEALRRPHGQHTTVVVHV Mvan_0040|M.vanbaalenii_PYR-1 TG-DGDGDRGVQLPPWPSAGEAFMELVEAGWDAEATRRPHGQHTTVVVHV MSMEG_3404|M.smegmatis_MC2_155 -------DPGDPAVPMPDLVDAFMALVETGWDREATRRPHGQHTAVAVHV Mb1794c|M.bovis_AF2122/97 ----NSDGVSDQRPPLPGNVEAFLRLVEAGWDAEVARRPHGQHTTVVMHL Rv2015c|M.tuberculosis_H37Rv ----NSDGVSDQRPPLPGNVEAFLRLVEAGWDAEVARRPHGQHTTVVMHL MAV_0036|M.avium_104 ----HRAGES--VPPLPGTLEAFIRLIETGWDAEAHRRPHGHHTTVVVHL TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 GEPDSAAAERDTRTSAQRNHDGLRACLRSTLASGKLGAHRGLPVTVVVST MUL_2371|M.ulcerans_Agy99 GPVSRDAADRDSRSVSQRQHDGFNAALRAVLASGELGQHNGLPASIIVST MMAR_0868|M.marinum_M DEPTEDAAATDARRPAQRQHDALNALVRGQLGDPALGTHNGLPVTVIVST Mflv_1988|M.gilvum_PYR-GCK DVESKLAALHLGP-------LLTAEERRYLSCEATCEVWFERHGRPIGAG Mvan_0040|M.vanbaalenii_PYR-1 DIDTRVAALHLGP-------LLTDEERRFLLCDATCEVWFQRHGRPLGTG MSMEG_3404|M.smegmatis_MC2_155 DLKSKVAALHLGP-------LLGDDERRLLTCDATCEVWFELRGRVIGTG Mb1794c|M.bovis_AF2122/97 DVQERAAGLHLGP-------LLSESERRYLLCDATFEAWFERDGQVIGCG Rv2015c|M.tuberculosis_H37Rv DVQERAAGLHLGP-------LLSESERRYLLCDATFEAWFERDGQVIGCG MAV_0036|M.avium_104 DAAQRVAGLHLGP-------LLSDAERRYLTCDATCEVWVERDGQPIGAG TH_1926|M.thermoresistible__bu -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 TLRELQSAAGRAISGSGNLVPIPDLIRMATHAFHYLTIFGDDG-RPLHLG MUL_2371|M.ulcerans_Agy99 TLKELEAAAGRGLTGGGTLLPMSDVIRLARHAHHYLAVF-DRG-EAIGLY MMAR_0868|M.marinum_M TLQEITAATGRAVTGGGTLLPMRDVIRMARHAYHYLAVFDEHSNRPLYLG Mflv_1988|M.gilvum_PYR-GCK RSTRTVNRRLRRALEHRDRSCVVPGCGAT-RGLHAHHIVHWEDGGDTELD Mvan_0040|M.vanbaalenii_PYR-1 RSTRTINRRLRRALEHRDRTCVVPGCGAT-RGLHAHHLVHWEDGGDTELD MSMEG_3404|M.smegmatis_MC2_155 RATRTVNRRLRRALEHRDRCCVVPGCSAT-RGLHAHHLVHWEDGGLTEMA Mb1794c|M.bovis_AF2122/97 RTTRQINRRLRRALEHRDRTCVVPGCGAT-RGLHAHHIRHWQDGGATELA Rv2015c|M.tuberculosis_H37Rv RTTRQINRRLRRALEHRDRTCVVPGCGAT-RGLHAHHIRHWQDGGATELA MAV_0036|M.avium_104 RSTRVINRRLRRALEHRHRGCAIPGCGAT-RGLHAHHLRHWEDGGPTELS TH_1926|M.thermoresistible__bu ----------------------VPGCGAT-RGLHAHHIRHWEHRGPTDLD MAB_0394c|M.abscessus_ATCC_199 RSKRIATPDQRIVLHAKDRGCSAPGCTVPGYLCQVHHVDDWRDDGPTDID MUL_2371|M.ulcerans_Agy99 HAKRLATPGQRIVLYAKDRGCTRPGCDVAGYQCEVHHVAAWAISGRTDIN MMAR_0868|M.marinum_M RTRRIASPDQRVVLYAAERGCTHPGCDAPGYWCEVHHLADWAAGGPTDVD *** .. ..**: * * *:: Mflv_1988|M.gilvum_PYR-GCK NLVLVCPYHHRAHHRGIIVITGPAHQLAVTDHTGRPLQSGTLARPPTQPP Mvan_0040|M.vanbaalenii_PYR-1 NLVLVCPYHHRTHHRGLITITGPAHQLLVTDHTGRPLQPGSLARPPTTPP MSMEG_3404|M.smegmatis_MC2_155 NLVLLCPYHHRAHHRGLITITGPADQLTVTDDRGRLLTNQSLARTPTTPP Mb1794c|M.bovis_AF2122/97 NLVLVCPYHHRAHHRGLITITGPADNLTVADSAGRPLSAGSLARASTKPP Rv2015c|M.tuberculosis_H37Rv NLVLVCPYHHRAHHRGLITITGPADNLTVADSAGRPLSAGSLARASTKPP MAV_0036|M.avium_104 NLVLVCPYHHRAHHRGEITITGPADTLLVTDSSGRHLKPGSLARKPTRPP TH_1926|M.thermoresistible__bu NLVLVCRYHHRLHHRGLITISDTPDNLTVSDRDGDRLHPGSLARPPDRPP MAB_0394c|M.abscessus_ATCC_199 NLTFACGPHHRLLQQGWTTRKRRSDGITEWIPPPHLDTGQSRTNDHHHPE MUL_2371|M.ulcerans_Agy99 QLTLACGPDHKLLEQGWRTRKN-AHGDTEWLPPPHLDHGQPRTNSYHHPE MMAR_0868|M.marinum_M NLTFACTPHHRLAGKSWQTIKL-PNSRTAWLPPPQLRRG-ARTNDYHHPE :*.: * .*: :. . . .. . :. * Mflv_1988|M.gilvum_PYR-GCK PAVPPYRGPSGERLYWKWYHPYQPPPTATAN----- Mvan_0040|M.vanbaalenii_PYR-1 PEVNPYPGTSGERAQWKWYHPYQPPPPTSNN----- MSMEG_3404|M.smegmatis_MC2_155 PTVPPCPGPLGERAQWWWYQPFEPQPPPSAN----- Mb1794c|M.bovis_AF2122/97 PAVAPWPGPTGERADWWWYEPFQPQPPPISN----- Rv2015c|M.tuberculosis_H37Rv PAVAPWPGPTGERADWWWYEPFQPQPPPISN----- MAV_0036|M.avium_104 PAVPPCPGPLGQRADWWWYDPFQPQPPPTTN----- TH_1926|M.thermoresistible__bu PQVAPCTGPTGERADWWWYTPYQPPAPPPADETGPG MAB_0394c|M.abscessus_ATCC_199 RFIRRF------------------------------ MUL_2371|M.ulcerans_Agy99 KLLRDSADDDDEGHGAA------------------- MMAR_0868|M.marinum_M RLLDDRAAPD-------------------------- :