For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TPGSYCVVGGGISGLTAAFRLRLAVGEDALITLLDPSDRLGGILRTERVGGQPMDLGAEAFVVRRPEMPA LLAELGLSGLQRSTTGARPLIYSCQELHPLPTGTVMGIPASARSLADLVDDATIAQIEAEPDRPLHWRPG GDPAVAELVAERFGEQTVTRSVDPLLCGVYAGSAATIGVRAAIPAVAAALDRGATSLTEAVRQSLPPASA GPVFGALTGGYQVLVEELVARSGVQWVQAAVSKIEPGWALHDDAGRRWHADAVILAIPAPRLVRILDGVD GVDPRSVAAASRVRSASSAVVALAVPADTPFPQCSGVLVANGEPLRAKAITLSSRKWGIQGDVQQLRISF GRFGDDLAERVSDHQLLSWARDDLATVFGVTVDPVDSRVQRWIEAMPRYGPGHGVLVAQVRAGLPPTLAV AGSYLDGIGVPACVGAASRAVDGVVGALNPQVAR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_3311 | hemY | - | 100% (455) | protoporphyrinogen oxidase |
M. ulcerans Agy99 | MUL_1281 | aofH_1 | 4e-06 | 20.53% (341) | flavin-containing monoamine oxidase AofH_1 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2696c | hemY | 0.0 | 72.97% (455) | protoporphyrinogen oxidase |
M. gilvum PYR-GCK | Mflv_3918 | - | 1e-162 | 65.77% (444) | protoporphyrinogen oxidase |
M. tuberculosis H37Rv | Rv2677c | hemY | 0.0 | 72.97% (455) | protoporphyrinogen oxidase |
M. leprae Br4923 | MLBr_01044 | hemY | 1e-179 | 70.74% (458) | protoporphyrinogen oxidase |
M. abscessus ATCC 19977 | MAB_2985c | - | 1e-133 | 56.73% (446) | protoporphyrinogen oxidase |
M. marinum M | MMAR_2039 | hemY | 0.0 | 98.90% (455) | protoporphyrinogen oxidase HemY |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_2781 | hemG | 1e-163 | 66.21% (441) | protoporphyrinogen oxidase |
M. thermoresistible (build 8) | TH_0076 | - | 2e-06 | 24.71% (518) | phytoene dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_2482 | - | 1e-162 | 64.88% (447) | protoporphyrinogen oxidase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3918|M.gilvum_PYR-GCK ----MSVAARYCVVGGGISGLVAAYRLRVAAGPDAVITVLDPADRLGGIL Mvan_2482|M.vanbaalenii_PYR-1 --MSTAVPARYCVVGGGISGLVAAYRLRVAAGPDASITLLDPADRLGGVL MSMEG_2781|M.smegmatis_MC2_155 ------MTMRFCVVGGGISGLVAAYRLRRAAGPHADITLLDPADRLGGIL MUL_3311|M.ulcerans_Agy99 -----MTPGSYCVVGGGISGLTAAFRLRLAVGEDALITLLDPSDRLGGIL MMAR_2039|M.marinum_M -----MTPGSYCVVGGGISGLTAAFRLRLAVGEDALITLLDPSDRLGGIL Mb2696c|M.bovis_AF2122/97 -----MTPRSYCVVGGGISGLTSAYRLRQAVGDDATITLFEPADRLGGVL Rv2677c|M.tuberculosis_H37Rv -----MTPRSYCVVGGGISGLTSAYRLRQAVGDDATITLFEPADRLGGVL MLBr_01044|M.leprae_Br4923 -----MTSRSYCVVGGGISGLTAAYRLRVATGDDVAITLFDPGDRLGGVL MAB_2985c|M.abscessus_ATCC_199 MTPQPSGSPSIAIVGGGISGLTAAYRLRRELGDDARISLYDPAGQLGGIL TH_0076|M.thermoresistible__bu MRTVTGRPDHIVVVGAGLAGLSAALHL---AGRGRSVTVVERGAHPGGRM . :**.*::** :* :* * ::: : . : ** : Mflv_3918|M.gilvum_PYR-GCK RTERIGGQAIDVGAEAFVARRPEVPALLGELGLSGRQITTTGARPLIYSE Mvan_2482|M.vanbaalenii_PYR-1 RTERIGGQLLDVGAEAFVARRPEVPALLGELGLSGRQIVPSGARPLIYSE MSMEG_2781|M.smegmatis_MC2_155 RTERVGGQWLDVGAEAFVARRPEMPALLAELGLAGRQIATSGARPLIYSG MUL_3311|M.ulcerans_Agy99 RTERVGGQPMDLGAEAFVVRRPEMPALLAELGLSGLQRSTTGARPLIYSC MMAR_2039|M.marinum_M RTERVGGQPMDLGAEAFVVRRPEMPALLAELGLSGLQRSTTGARPLIYSC Mb2696c|M.bovis_AF2122/97 RTEHIGGQPMDLGAEAFVLRRPEMPALLAELGLSDRQLASTGARPLIYSQ Rv2677c|M.tuberculosis_H37Rv RTEHIGGQPMDLGAEAFVLRRPEMPALLAELGLSDRQLASTGARPLIYSQ MLBr_01044|M.leprae_Br4923 RTECVGGQPMDLGAEAFLLRRPEVPALLAELGLSERQRATTDARPLIYSQ MAB_2985c|M.abscessus_ATCC_199 RTITLGEHRIDIGAEAFITRRPEVLDLLDELGLADRTLDTTGARPLIYAG TH_0076|M.thermoresistible__bu GRLDVHGYRLDTGPTVLTMP-EILDETFAAVGSSVADRLDLKPVVPAYRA : :* *. .: : : :* : . * Mflv_3918|M.gilvum_PYR-GCK GRLHQLPTDTVNGIPSRPSALSGLVDDATVR-WMLDEPRRPLVWRSGADP Mvan_2482|M.vanbaalenii_PYR-1 GRLHPLPKDTVQGIPSRPEALAGLVDDATIR-WMLDEPRRPFSWCQGADP MSMEG_2781|M.smegmatis_MC2_155 ARLHPLPQGTLQGIPAQASSLLGLVDDATVA-QIIDERARPFAWRPGSDP MUL_3311|M.ulcerans_Agy99 QELHPLPTGTVMGIPASARSLADLVDDATIA-QIEAEPDRPLHWRPGGDP MMAR_2039|M.marinum_M QELHPLPTGTVMGIPASARSLAGLVDDATIA-QIEAEPDRPLHWRPGGDP Mb2696c|M.bovis_AF2122/97 QRLHPLPPQTVVGIPSSAGSMAGLVDDATLA-RIDAEAARPFTWQVGSDP Rv2677c|M.tuberculosis_H37Rv QRLHPLPPQTVVGIPSSAGSMAGLVDDATLA-RIDAEAARPFTWQVGSDP MLBr_01044|M.leprae_Br4923 QRLHSLPPDTVAGIPSSATSVAGLVDDATVA-RIGAEAVRPLSWEPGSDP MAB_2985c|M.abscessus_ATCC_199 GGLHPLPARTVNGIPASASSVVGLVDEETVA-RIDSEPQRDMHWTVGAEP TH_0076|M.thermoresistible__bu EFADGSGLDVHTDPAAMADEITRFAGGAQAAGYLQLRNWLDLLYRTEFDR . . . .: . : :.. : . : : : Mflv_3918|M.gilvum_PYR-GCK TVAELVGERFGEQVVVRSVDPLLAGVYAGSAATIGMRAAAPTVAAALDNG Mvan_2482|M.vanbaalenii_PYR-1 SVAELVGDRFGEQVVIRSVDPLLSGVYAGSAATIGIRAGAPTVAAALDGG MSMEG_2781|M.smegmatis_MC2_155 SVADVVGDRFGMQVVYRSVDPLLTGVYAGSSATIGLRSAVPTLAAALDRG MUL_3311|M.ulcerans_Agy99 AVAELVAERFGEQTVTRSVDPLLCGVYAGSAATIGVRAAIPAVAAALDRG MMAR_2039|M.marinum_M AVAELVAERFGEQTVTRSVDPLLCGVYAGSAATIGVRAAIPAVAAALDRG Mb2696c|M.bovis_AF2122/97 AVADLVADRFGDQVVARSVDPLLSGVYAGSAATIGLRAAAPSVAAALDRG Rv2677c|M.tuberculosis_H37Rv AVADLVADRFGDQVVARSVDPLLSGVYAGSAATIGLRAAAPSVAAALDRG MLBr_01044|M.leprae_Br4923 AMAELVADRFGEQAVARLVDPLLGGVYAGSAATIGLRAGAPSVAAALDCG MAB_2985c|M.abscessus_ATCC_199 TVADLVALRFGPQVVARLVDPLLGGVYAGSAATTGLRTAAPGIARALDEG TH_0076|M.thermoresistible__bu FIAANFDSPL-SLVSPHLAKLVALGGFRRWEKVMRRFITDERLLRVFTFQ :* . : . : .. : * : . : .: Mflv_3918|M.gilvum_PYR-GCK ARSLTEAVVAALPPPRAGSVFGAID------GGYQVLLDELVRRSGLQ-- Mvan_2482|M.vanbaalenii_PYR-1 ARSLTEAVTRALPPPQAGAVFGAID------GGYQVLVDELVRRSWLE-- MSMEG_2781|M.smegmatis_MC2_155 APSLTDAVRDALPPPVTGSVFGALD------GGYRVLLEELQRRAAVR-- MUL_3311|M.ulcerans_Agy99 ATSLTEAVRQSLPPASAGPVFGALT------GGYQVLVEELVARSGVQ-- MMAR_2039|M.marinum_M ATSLTEAVRQSLPPASVGPVFGALT------GGYQVLVEELVARSGVQ-- Mb2696c|M.bovis_AF2122/97 ATSVTDAVRQALPPGSGGPVFGALD------GGYQVLLDGLVRRSRVH-- Rv2677c|M.tuberculosis_H37Rv ATSVTDAVRQALPPGSGGPVFGALD------GGYQVLLDGLVRRSRVH-- MLBr_01044|M.leprae_Br4923 ATSLMEAVRQGLPPVAAGPVFGALD------GGYQVLIDELVRRSRLQ-- MAB_2985c|M.abscessus_ATCC_199 AGSLLAAARQALPPISDSGIFGAVD------GGYAVLVEELWSRARAE-- TH_0076|M.thermoresistible__bu ALYVGVPPQRALAVYAVIAYMDTVNGVYFPAGGVRAVPEALAAAARDAGV * : . .*. :.:: ** .: : * : Mflv_3918|M.gilvum_PYR-GCK --WAQVAARGVHPVR-AGWEVVDDEGGHWPADAVVLAVPAPRLPALLA-- Mvan_2482|M.vanbaalenii_PYR-1 --WAQVSVRSVGRGA-RGWEVLDDEGTRWPADAVVLAVPAPRLPALVA-- MSMEG_2781|M.smegmatis_MC2_155 --WAQVTAVRVDRDA-NGWLVFDDEGTNWNADGVVLAVPAPALPALIE-- MUL_3311|M.ulcerans_Agy99 --WVQAAVSKIEP----GWALHDDAGRRWHADAVILAIPAPRLVRILDGV MMAR_2039|M.marinum_M --WVQAAVSKIEP----GWALHDDAGRRWHADAVILAIPAPRLVRILDGV Mb2696c|M.bovis_AF2122/97 --WVRARVVQLER----GWVLRDETGGRWQADAVILAVPAPRLARLVD-- Rv2677c|M.tuberculosis_H37Rv --WVRARVVQLER----GWVLRDETGGRWQADAVILAVPAPRLARLVD-- MLBr_01044|M.leprae_Br4923 --WVAATVVGLDRGT-CGWTLVDDTGACWSADGVILAVPAPRLVRLLQ-- MAB_2985c|M.abscessus_ATCC_199 --HVQVAVTGIERDG-AGWAVTGEGGLTDAVDAVIVAVPAPRAAAILE-- TH_0076|M.thermoresistible__bu EFCYRERVTGLERSGDRVTAVHTDTGRRLAADVVVLTTELPDSYRLLG-- . : : : * .* *::: * :: Mflv_3918|M.gilvum_PYR-GCK -ELAPHSADIARRIPVASAAVVALALPGGTPLPEQSGVLVAG-------- Mvan_2482|M.vanbaalenii_PYR-1 -DIAPRTAAAARRIPVASAAVVALALPGGTPLPEQSGVLVAG-------- MSMEG_2781|M.smegmatis_MC2_155 -HVAPRTAAAARRIRVASAAVVALALPGGTPIPQQSGVLVATG------- MUL_3311|M.ulcerans_Agy99 DGVDPRSVAAASRVRSASSAVVALAVPADTPFPQCSGVLVAN-------- MMAR_2039|M.marinum_M DGVDPRSVAAASRVRSASSAVVALAVPADTPFPQCSGVLVAN-------- Mb2696c|M.bovis_AF2122/97 -GIAPRTHAAARQIVSASSAVVALAVPGGTAFPHCSGVLVAG-------- Rv2677c|M.tuberculosis_H37Rv -GIAPRTHAAARQIVSASSAVVALAVPGGTAFPHCSGVLVAG-------- MLBr_01044|M.leprae_Br4923 -QIAPRTVAAASRIVSASSAVVALSVPRDTTFPQNSGVLVAS-------- MAB_2985c|M.abscessus_ATCC_199 -AVAPESAAAARTIPVASSVVVALTLPGDAPIPANSGVLVAS-------- TH_0076|M.thermoresistible__bu ----RRPRRPARLRPAPSAVVAHVGCRRAEPAPPHHTILFGSAWEQTFRD .. * .*:.*. : . * :*.. Mflv_3918|M.gilvum_PYR-GCK ---------RGPLHTKAVTLSSRKWGRRG-----------SAEMLRLSYG Mvan_2482|M.vanbaalenii_PYR-1 ---------QGRLRAKAVTLSSKKWGRRA-----------NVEMVRLSYG MSMEG_2781|M.smegmatis_MC2_155 --------EAGSLNAKAVTLSSRKWGRRG-----------NVELLRLSFG MUL_3311|M.ulcerans_Agy99 ---------GEPLRAKAITLSSRKWGIQG-----------DVQQLRISFG MMAR_2039|M.marinum_M ---------GEPLRAKAITLSSRKWGIQG-----------DVQQLRISFG Mb2696c|M.bovis_AF2122/97 ---------DESPHAKAITLSSRKWGQRG-----------DVALLRLSFG Rv2677c|M.tuberculosis_H37Rv ---------DESPHAKAITLSSRKWGQRG-----------DVALLRLSFG MLBr_01044|M.leprae_Br4923 ---------GERLRAKAVTLSSRKWGLQG-----------DTQLVRLSFG MAB_2985c|M.abscessus_ATCC_199 ---------GEALHTKAITFSTSKWGLRGR----------STQVVRLSYG TH_0076|M.thermoresistible__bu IIDDGRLMRDPSLLVSRPTAGDASLAPDGRDLLYILAPAPNTAAGRIDWD .. * . . . . .. *:.:. Mflv_3918|M.gilvum_PYR-GCK RFGDDLARSTGDDELLAWADEDLATLFGIAVEPVDARVVRWIDAMPQYGP Mvan_2482|M.vanbaalenii_PYR-1 RFGDDLARSTGDEDLLAWAAQDLSVLFGISVDPVDSRVVRWIDALPQYGP MSMEG_2781|M.smegmatis_MC2_155 RYGDDLARSTGDEDLLAWSTRDLNTLFGITVDPVDWHIQRWIDAMPQYGP MUL_3311|M.ulcerans_Agy99 RFGDDLAERVSDHQLLSWARDDLATVFGVTVDPVDSRVQRWIEAMPRYGP MMAR_2039|M.marinum_M RFGDDLAERVSDHQLLSWARDDLATVFGVTVDPVDSRVQRWIEAMPQYGP Mb2696c|M.bovis_AF2122/97 RFGDEPALTASDDQLLAWAADDLVTVFGVAVDPVDVRVRRWIEAMPQYGP Rv2677c|M.tuberculosis_H37Rv RFGDEPALTASDDQLLAWAADDLVTVFGVAVDPVDVRVRRWIEAMPQYGP MLBr_01044|M.leprae_Br4923 KFGDQVASTASDDELLAWAVSDLAAVFDVTVDPVDVCVQRWIDAMPQYGP MAB_2985c|M.abscessus_ATCC_199 RFGDTVARATTDEQLRHWAVADLEAVLGAGIVPVNSAVARWIDAMPQYGP TH_0076|M.thermoresistible__bu LLGDGYAEEMLNAVSARLPESTVDAEMLHVVNPADWERQGMAAGTPFALA ** * : . : . : : *.: . * . Mflv_3918|M.gilvum_PYR-GCK GHADRVADLRAG-----LPRGLAVAGAYLDGIGVPACVASAARAVASLVA Mvan_2482|M.vanbaalenii_PYR-1 GHAALVAELRAG-----LPGGLAVAGAYLDGIGVPACVAAATRAVAALVV MSMEG_2781|M.smegmatis_MC2_155 GHLDLVAELRAG-----LPPNLAVTGSYLDGIGVPACVGAATRAALTLVK MUL_3311|M.ulcerans_Agy99 GHGVLVAQVRAG-----LPPTLAVAGSYLDGIGVPACVGAASRAVDGVVG MMAR_2039|M.marinum_M GHGELVAQVRAG-----LPPTLAVAGSYLDGIGVPACVGAASRAVDGIVG Mb2696c|M.bovis_AF2122/97 GHADVVAELRAG-----LPPTLAVAGSYLDGIGVPACVGAAGRAVTSVIE Rv2677c|M.tuberculosis_H37Rv GHADVVAELRAG-----LPPTLAVAGSYLDGIGVPACVGAAGRAVTSVIE MLBr_01044|M.leprae_Br4923 GHADLVAEVRAG-----LPPTLVVAGSHMDGIGVPACISAAGR----AIE MAB_2985c|M.abscessus_ATCC_199 GHAEVVDAIRSG-----LPSGIAVAGSYLDGIGVPACVASASQAAQASVA TH_0076|M.thermoresistible__bu HTFSQTGPFRPGNMVRGVANAVLAGGSTVPGVGIPTALLSGRLAADRITG . .*.* :. : . *: : *:*:*:.: :. Mflv_3918|M.gilvum_PYR-GCK GSSVGQ-- Mvan_2482|M.vanbaalenii_PYR-1 DGR----- MSMEG_2781|M.smegmatis_MC2_155 TGVAR--- MUL_3311|M.ulcerans_Agy99 ALNPQVAR MMAR_2039|M.marinum_M ALNPQVAR Mb2696c|M.bovis_AF2122/97 ALDAQVAR Rv2677c|M.tuberculosis_H37Rv ALDAQVAR MLBr_01044|M.leprae_Br4923 ALQAEVAR MAB_2985c|M.abscessus_ATCC_199 RWRHG--- TH_0076|M.thermoresistible__bu AAR-----