For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTVVVGYLAGRVGPSALHLAVRAARTLDTSLTVATILTKPWLTPPLAKGDYSEWAEQVAEDSEKEAHRYL RTVATGIEVSYCHREHRSVSGGLIEVVEELDAQMLILGSFPNGRRARVLIGSTADWVLHSSPVPVAISPR QYHSRTDRLTRITCGYAATTDSVEVVRRCAELARQYGVPLRVITFAVRVRTMYPPEVGLHAEALVLEAWA EQARGMLEMLQKDGIVEEDAVLEVITGNGWQHALDAADWEDGEILAVGTSPRGDIARVFLGSNSGRIIRH SPVPVLVLPG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_1245 | - | - | 100% (290) | hypothetical protein MUL_1245 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2346c | - | 1e-119 | 72.95% (292) | hypothetical protein Mb2346c |
M. gilvum PYR-GCK | Mflv_1999 | - | 2e-45 | 33.11% (293) | UspA domain-containing protein |
M. tuberculosis H37Rv | Rv2319c | - | 1e-119 | 72.95% (292) | hypothetical protein Rv2319c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3843 | - | 7e-83 | 51.88% (293) | hypothetical protein MAB_3843 |
M. marinum M | MMAR_3620 | - | 1e-164 | 98.97% (290) | hypothetical protein MMAR_3620 |
M. avium 104 | MAV_2494 | - | 1e-05 | 25.26% (190) | universal stress protein family protein |
M. smegmatis MC2 155 | MSMEG_1411 | - | 1e-80 | 50.85% (293) | universal stress protein family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1573 | - | 8e-19 | 26.19% (294) | UspA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MUL_1245|M.ulcerans_Agy99 MTVVVGYLAGRVGPSALHLAVRAARTLDTSLTVATILTKPWLTPPLAKG- MMAR_3620|M.marinum_M MTVVVGYLAGRVGPSALHLAVRAARTLDTSLTVATILTKPWLTPPLAKG- Mb2346c|M.bovis_AF2122/97 MTIVVGYLAGKVGPSALHLAVRVARMHKTSLTVATIVRRHWPTPSLARVD Rv2319c|M.tuberculosis_H37Rv MTIVVGYLAGKVGPSALHLAVRVARMHKTSLTVATIVRRHWPTPSLARVD MAB_3843|M.abscessus_ATCC_1997 MTVVVGYLSGKGGKGALHLAVESARVLETSLTVTTVVPKPWTTLSKAKID MSMEG_1411|M.smegmatis_MC2_155 MTVVVGYLTGKAGASPLHLAVGAARTLQTSLAVATVVPRPWMTPSPARID Mflv_1999|M.gilvum_PYR-GCK MTIIAGFSASGQGPAPLHLAAQLARCTGERIVAVAIVERQWPQN----AD Mvan_1573|M.vanbaalenii_PYR-1 MHLTVGYLATPTGDDGVALASALARTFDATVDVVIVVRHELPDG-----H MAV_2494|M.avium_104 -----------------MRTIRTAAAFSSGLYLRVVG------------F : * : : MUL_1245|M.ulcerans_Agy99 -DYSEWAEQVAEDSEKEAHRYLRTVATG-IEVSYCHREHRSVSGGLIEVV MMAR_3620|M.marinum_M -DYSEWAEQVAEDSEKEAHRYLRTVATG-IEVSYCHREHRSVSGGLIEVV Mb2346c|M.bovis_AF2122/97 AEYELWSEQLAAASAREAQRYLRRLADG-IEVSYHHRAHRSVSAGLLDVV Rv2319c|M.tuberculosis_H37Rv AEYELWSEQLAAASAREAQRYLRRLADG-IEVSYHHRAHRSVSAGLLDVV MAB_3843|M.abscessus_ATCC_1997 AEYAQWAQKLSDDSKSEATAYLEKIGAG-IDVTFHNVAHRSVSGGLLEAV MSMEG_1411|M.smegmatis_MC2_155 AEYAQYAAQLASTSAEQARQVISELDSE-LEVTFHKFAHRSVSDGLMEAV Mflv_1999|M.gilvum_PYR-GCK PLEDEYLNYVGAQAQKSLKEMVDKLPGD-LDVWRMVHQAESVPSGLTELA Mvan_1573|M.vanbaalenii_PYR-1 PGRAEYQQMLVNLGEQWAARAVAALAADGVTAESSAIVADSFAQALVEFA MAV_2494|M.avium_104 PGDCSFGIAPSSFPRSGASRISRAIHYS------------APVPALLELS : : : .* : MUL_1245|M.ulcerans_Agy99 EELDAQMLILGSFPNGRRARVLIGSTADWVLHSSPVPVAISPRQYH-SRT MMAR_3620|M.marinum_M EELDAEMLILGSFPNGRRARVLIGSTADWVLHSSPVPVAISPRQYH-SRT Mb2346c|M.bovis_AF2122/97 EELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAITPRRYR-CYT Rv2319c|M.tuberculosis_H37Rv EELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAITPRRYR-CYT MAB_3843|M.abscessus_ATCC_1997 EASDADVLVVGSASEGRLGQVVLGSTGDRLLHSSPVPLAISPRGYRGSRA MSMEG_1411|M.smegmatis_MC2_155 ESLNAEALVLGSAADGKLGQVVVGSTADRLLHSCPVPLVVSPRGYRRPRS Mflv_1999|M.gilvum_PYR-GCK EEMNADVVVVGSSSSGLLGRIALGSVTDRLVHTAAVPVAIAPRGYP-LQD Mvan_1573|M.vanbaalenii_PYR-1 EEKSSDLIVVGGARDGFFGRHTIGPVTGALLHSSSIPVALAPRGYAEDPD MAV_2494|M.avium_104 G--AVRMLVLGSAGHGLLARGLLGSVSSAVVRHANCPVAVVR--DEELPD :::*. * .: :*.. . ::: . *:.: MUL_1245|M.ulcerans_Agy99 DRLTRITCGYAATTDSVEVVRRCAELARQYGVPLRVITFAVRVRTMYPPE MMAR_3620|M.marinum_M DRLTRITCGYAATTDSVEVVRRCAELARQYGVPLRVITFAVRGRTMYPPE Mb2346c|M.bovis_AF2122/97 DRLTRLSCGYSATSGSVDVVRRCGHLASRYGVPMRVITFAVRGRTMYPPE Rv2319c|M.tuberculosis_H37Rv DRLTRLSCGYSATSGSVDVVRRCGHLASRYGVPMRVITFAVRGRTMYPPE MAB_3843|M.abscessus_ATCC_1997 GTVSRVTCGYPGTEDAVDVVQQAVRLTQRLHAPLRVVTFAVRGRTMLTAG MSMEG_1411|M.smegmatis_MC2_155 GGLSRITVAYPGTRDAVDVVERIAALTQRLGVTMRVVTFAVRGRSMYPPL Mflv_1999|M.gilvum_PYR-GCK SRIERLTVAYGGHADEGGLVAAGAELARRWSATLRIASFTVRPVTMFSGA Mvan_1573|M.vanbaalenii_PYR-1 EHFLAVTAAVPSKPGDDNPLPFAIALAGAAGLRMRMLSLVSAEN-----L MAV_2494|M.avium_104 PHSAPVLLGTDGSPASELATEIAFDEASRRGVDLVAIHAWSDTAVTEVFE : . . : : MUL_1245|M.ulcerans_Agy99 VGLHAEALVLEAWAEQARG---MLEMLQKDGIVEEDAVLEVITGNGWQHA MMAR_3620|M.marinum_M VGLHAEALVLEAWAEQARG---MLEMLQKDGIVEEDAVLEVITGNGWQHA Mb2346c|M.bovis_AF2122/97 VGLHAEASVLEAWAAQARE---LLEKLRINGVVSEDVVLQVVTGNGWAQA Rv2319c|M.tuberculosis_H37Rv VGLHAEASVLEAWAAQARE---LLEKLRINGVVSEDVVLQVVTGNGWAQA MAB_3843|M.abscessus_ATCC_1997 VGPEAEDAVLASWVTQSEE---ALSELRQAGIVTADVELKVVTGDTWDDA MSMEG_1411|M.smegmatis_MC2_155 VGLSKEDLILQEWIEQAQD---SLRRLATDGVIGEDVEVVVASGSAWDEA Mflv_1999|M.gilvum_PYR-GCK IETSAEDLVVQQWVRRTQEKIAAQLEAVRSGVDTLDAEVVIGAGATWRDA Mvan_1573|M.vanbaalenii_PYR-1 AEAGSAKEVRALQVAAAEEN---LAVAARALPDAPDIESLVADGMTLESA MAV_2494|M.avium_104 IDWPIVEAEAERHLAESLAG-------WQERYPDVTVHRLVARDRAAQHI : : . MUL_1245|M.ulcerans_Agy99 LDAADWEDGEILAVGTSPRGDIARVFLGSNSGRIIRHSPVPVLVLPG--- MMAR_3620|M.marinum_M LDAADWEDGEILAVGTSPRGDIARVFLGSNSGKIIRHSPVPVLVLPG--- Mb2346c|M.bovis_AF2122/97 LDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG--- Rv2319c|M.tuberculosis_H37Rv LDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG--- MAB_3843|M.abscessus_ATCC_1997 LDNAEWNDGELLVLGSRPHSAVARVFLGSRATKIVRHSPVPVVVMPG--- MSMEG_1411|M.smegmatis_MC2_155 LDSIEWIEGEVLAIGTSPAGAVRRVFLGERGTKILRYSPLPVLVLPG--- Mflv_1999|M.gilvum_PYR-GCK VEAIDWGSGDVLVLGSGAAGQVAQVFLGSAAARILRHSPVPTMIVPRREG Mvan_1573|M.vanbaalenii_PYR-1 LKKLRWDDGDLLVVGSSRFAAPRRIFLGSTAARILAGVDVPVIVVPKAE- MAV_2494|M.avium_104 ISSS--ETAQLVVVGSHGRGGLARLLLGSVSNAVLHSVRVPVIVARPPA- :. .:::.:*: . :::**. . :: :*.:: MUL_1245|M.ulcerans_Agy99 - MMAR_3620|M.marinum_M - Mb2346c|M.bovis_AF2122/97 - Rv2319c|M.tuberculosis_H37Rv - MAB_3843|M.abscessus_ATCC_1997 - MSMEG_1411|M.smegmatis_MC2_155 - Mflv_1999|M.gilvum_PYR-GCK L Mvan_1573|M.vanbaalenii_PYR-1 - MAV_2494|M.avium_104 -