For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRTIRTAAAFSSGLYLRVVGFPGDCSFGIAPSSFPRSGASRISRAIHYSAPVPALLELSGAVRMLVLGSA GHGLLARGLLGSVSSAVVRHANCPVAVVRDEELPDPHSAPVLLGTDGSPASELATEIAFDEASRRGVDLV AIHAWSDTAVTEVFEIDWPIVEAEAERHLAESLAGWQERYPDVTVHRLVARDRAAQHIISSSETAQLVVV GSHGRGGLARLLLGSVSNAVLHSVRVPVIVARPPA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2494 | - | - | 100% (245) | universal stress protein family protein |
M. avium 104 | MAV_2507 | - | 9e-70 | 64.71% (204) | universal stress protein family protein |
M. avium 104 | MAV_2506 | - | 5e-55 | 56.57% (198) | universal stress protein family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2028c | - | 8e-69 | 61.90% (210) | hypothetical protein Mb2028c |
M. gilvum PYR-GCK | Mflv_4382 | - | 5e-58 | 58.25% (194) | UspA domain-containing protein |
M. tuberculosis H37Rv | Rv2005c | - | 8e-69 | 61.90% (210) | hypothetical protein Rv2005c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2489 | - | 4e-36 | 43.15% (197) | hypothetical protein MAB_2489 |
M. marinum M | MMAR_2993 | - | 4e-70 | 60.65% (216) | hypothetical protein MMAR_2993 |
M. smegmatis MC2 155 | MSMEG_3940 | - | 1e-51 | 51.92% (208) | universal stress protein family protein |
M. thermoresistible (build 8) | TH_4471 | - | 5e-56 | 51.54% (227) | PUTATIVE putative universal stress protein family protein |
M. ulcerans Agy99 | MUL_2234 | - | 3e-70 | 60.65% (216) | hypothetical protein MUL_2234 |
M. vanbaalenii PYR-1 | Mvan_1963 | - | 2e-56 | 55.34% (206) | UspA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb2028c|M.bovis_AF2122/97 MSKPRK--QHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVN--- Rv2005c|M.tuberculosis_H37Rv MSKPRK--QHGVVVGVDGSLESDAAACWGATDAAMRNIPLTVVHVVN--- MMAR_2993|M.marinum_M MSTLGK--RLGVVVGVDGSPASNAAVCWAARDAAMRNLPLTVVHVVN--- MUL_2234|M.ulcerans_Agy99 MSTLGK--RLGVVVGVDGSPASNAAVCWAARDAAMRNLPLTVVHVVN--- MAV_2494|M.avium_104 MRTIR------------------TAAAFSS------GLYLRVVGFPG--- Mflv_4382|M.gilvum_PYR-GCK MSTQP--APLGIVVGVDGSAASRVAVDWAARDAALRQVPLTLAYVLPG-- Mvan_1963|M.vanbaalenii_PYR-1 MSTQP--APVGIVVAVDGSDASRVAVDWAARDAAMRRIPLTLAHVLPS-- MSMEG_3940|M.smegmatis_MC2_155 MSHNGNGAGYGMVVAVDGSAESDAAVRWAAREATLRKIPVTVMHVVEP-- TH_4471|M.thermoresistible__bu MAIPAI--QDSIVAGVDGSPSSAAAVEWAARNAALRDRPLVLVHVVPSPM MAB_2489|M.abscessus_ATCC_1997 MTTSTP--NSHILVGVDGSTSALHALTWAGAEAQRRNLPLTLVHVIDH-- * * :.. : : . Mb2028c|M.bovis_AF2122/97 ADVATWPPMPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSEL Rv2005c|M.tuberculosis_H37Rv ADVATWPPMPYPETWGVWQEDEGRQIVANAVKLAKEAVGADRKLSVKSEL MMAR_2993|M.marinum_M TDVATWPPMPYPDTWAVWQEDEGRKVIAGAVKIAEESVAGDRELTIKSEI MUL_2234|M.ulcerans_Agy99 TDVATWPPMPYPDTWAVWQEDEGRKVIAGAVKIAEDSVAGDRELTIKSEI MAV_2494|M.avium_104 DCSFGIAPSSFPRS------------------------GASR---ISRAI Mflv_4382|M.gilvum_PYR-GCK AAVQSWIQVPLPASFYEDEKAEATRVLADARAVVDAATQAHPLPAVTEKV Mvan_1963|M.vanbaalenii_PYR-1 AATQSWIQVPLPAAFFEDEKLEAERILADARALVTAATEGGEALTVDEVV MSMEG_3940|M.smegmatis_MC2_155 MIVN-WPVPPVQGSVTEWQEANARNVIKHAHDTFVAVEESAPDGIRHEIR TH_4471|M.thermoresistible__bu VTTAPWPQLPLPDDAFRVMQEEGERLLAQAR----AAAEQAGAGEVRTAV MAB_2489|M.abscessus_ATCC_1997 SSLGQGYNLGASASFFQHLETDGAEFLSQAKD---HVYALHPNVEVSTVK Mb2028c|M.bovis_AF2122/97 VFSTPVPTMVEISNEAEMVVLGSSGRGALARGLLGSVSSSLVRRAGCPVA Rv2005c|M.tuberculosis_H37Rv VFSTPVPTMVEISNEAEMVVLGSSGRGALARGLLGSVSSSLVRRAGCPVA MMAR_2993|M.marinum_M VFSLPVPTMVEMSAEAELMVVGSSGHGALARVLLGSVSSSLVRRASCPVA MUL_2234|M.ulcerans_Agy99 VFSLPVPTMVEMSAEAELMVVGSSGHGALARVLLGSVSSSLVRRASCPVA MAV_2494|M.avium_104 HYSAPVPALLELSGAVRMLVLGSAGHGLLARGLLGSVSSAVVRHANCPVA Mflv_4382|M.gilvum_PYR-GCK LSGQPVPTLADLSRDADMIVVGSRGMGKWERRVLGSVSSGLVHHARCPVA Mvan_1963|M.vanbaalenii_PYR-1 LSGQPVAALVDLAKDAEMLVMGSRGLGKWERRLLGSVSSGVVHHAHCPVA MSMEG_3940|M.smegmatis_MC2_155 YAG-IVAELVDVSKNATMMVVGSRGLGAFGGALLGSVSSGVIHHAHCPVA TH_4471|M.thermoresistible__bu LQAGIVGTLTELSRDADRIVVGSRGQTALGRMLLGSVSTGLVHQAECPVV MAB_2489|M.abscessus_ATCC_1997 ATGRPVPVLVELSRNALMTVLGSSGLGGFTGMMAGSVSVSLTAKGHSPVV . * : ::: . *:** * : **** .: :. .**. Mb2028c|M.bovis_AF2122/97 VIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGVELIAVHA Rv2005c|M.tuberculosis_H37Rv VIHSDDAVIPDPQHAPVLVGIDGSPVSELATAVAFDEASRRGVELIAVHA MMAR_2993|M.marinum_M VIRDEDPMIPDPLHAPVLVGIDGSPASELATAVAFDEASRRGVELIAVHA MUL_2234|M.ulcerans_Agy99 VIRDEDPMIPDPLHAPVLVGIDGSPASELATAVAFDEASRRGVELIAVHA MAV_2494|M.avium_104 VVRDEE--LPDPHSAPVLLGTDGSPASELATEIAFDEASRRGVDLVAIHA Mflv_4382|M.gilvum_PYR-GCK VIYDEDPLIPHPAQAPVVVGIDGSPASERATAIAFDEACRRGVDLVAVHT Mvan_1963|M.vanbaalenii_PYR-1 VIHDVDPLIPHPAQAPVVVGVDGSPASEHATAIAFDEASFRGVDLVAVHT MSMEG_3940|M.smegmatis_MC2_155 VIHGDQIRRPDP-RSPVLVGIDGSPASEDATAFAFDEASRRRVDLIALHA TH_4471|M.thermoresistible__bu IVRDGD---QPPGDAPVLVGIDGSPASELATEVAFEEASVRQVELVALHG MAB_2489|M.abscessus_ATCC_1997 VVRESP----VPGGGPVVVGIDDSESSDGAAAWAFEEAAMRETELVAVHV :: * .**::* *.* *: *: **:**. * .:*:*:* Mb2028c|M.bovis_AF2122/97 WSDVEV------VELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRV Rv2005c|M.tuberculosis_H37Rv WSDVEV------VELPGLDFSAVQQEAELSLAERLAGWQERYPDVPVSRV MMAR_2993|M.marinum_M WSDQDV------VELPGLNWSTMEAEARLSLAERLAGWEERYPDVTVRRV MUL_2234|M.ulcerans_Agy99 WSDQGV------VELPGLNWSTMEAEARLSLAERLAGWEERYPDVTVRRV MAV_2494|M.avium_104 WSDTAV------TEVFEIDWPIVEAEAERHLAESLAGWQERYPDVTVHRL Mflv_4382|M.gilvum_PYR-GCK WSDAG-------YELPGVEWTEVQPEEEMLLSERLAGWHERYPDVTVHRV Mvan_1963|M.vanbaalenii_PYR-1 WSDAG-------YELPGTGWAEIQPEEDMLLAERLAGWQERYPDVTVHRV MSMEG_3940|M.smegmatis_MC2_155 WSDVGV------FSALGMDWHEYEDQGRELLGERLAGWRERYPDVRVTRQ TH_4471|M.thermoresistible__bu WRDTSL------FHYPGLDTESLQTQAEAVLAERLAGWQERYPDVTVRRV MAB_2489|M.abscessus_ATCC_1997 WNNIPPGYVYAYTAWSAMDSAGEQQRQEQLLAERLAGWQEKYPDVPVRRV * : : . *.* ****.*:**** * * Mb2028c|M.bovis_AF2122/97 VVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPV Rv2005c|M.tuberculosis_H37Rv VVCDRPARKLVQKSASAQLVVVGSHGRGGLTGMLLGSVSNAVLHAARVPV MMAR_2993|M.marinum_M VVCDKPAHQLVEMSQTVQLVVVGSHGRGGITGVLLGSVSNAVVHAVRMPV MUL_2234|M.ulcerans_Agy99 VVCDEPAHQLVEMSQTVQLVVVGSHGRGGITGVLLGSVSNAVVHAVRMPV MAV_2494|M.avium_104 VARDRAAQHIISSSETAQLVVVGSHGRGGLARLLLGSVSNAVLHSVRVPV Mflv_4382|M.gilvum_PYR-GCK VRRDQPARRLLEEAEKAQLLVVGSHGRGGFTGMLLGSVGSQIVQSSRTPV Mvan_1963|M.vanbaalenii_PYR-1 VCRDQPARRLLEEAAKGQLLVVGSHGRGGFGGMLLGSVGSQVVQSARGPV MSMEG_3940|M.smegmatis_MC2_155 IVCDQPARWLIDGSRHAQLVVVGSHGRAGFAGMLLGSVGSKVARAAYSPV TH_4471|M.thermoresistible__bu VVAEHPARALVQRAEEAQLVVVGSRGRSGLTGKLLGSVSTGVVHSVRVPV MAB_2489|M.abscessus_ATCC_1997 VAVGHPADVLLSQAAGAQLIVTGSRGRGDIAGFFLGSTSHALIHKASCPV : ..* ::. : **:*.**:**..: :***.. : : ** Mb2028c|M.bovis_AF2122/97 IVARQS- Rv2005c|M.tuberculosis_H37Rv IVARQS- MMAR_2993|M.marinum_M IVARSS- MUL_2234|M.ulcerans_Agy99 IVARSS- MAV_2494|M.avium_104 IVARPPA Mflv_4382|M.gilvum_PYR-GCK IVARTA- Mvan_1963|M.vanbaalenii_PYR-1 IVARR-- MSMEG_3940|M.smegmatis_MC2_155 IVVR--- TH_4471|M.thermoresistible__bu MVARPR- MAB_2489|M.abscessus_ATCC_1997 LVAPRT- :*.