For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ARSRITDWHPEDTVAWANGNYAIARRNLTWLVLNAHIAFSVWYLWSVMVLFMPQSIYGFTTGDKLLLDAT ASLVGALVRIPYAMAANWFGGSTWTTISSLVLLIPTLGTIVLLAHPGLPLWLYLVCAAFTGLGGGNYSGS LAKVDGLFPQRLKGFVLGLTGGMANLGSAAVQMVGLVVLATAGHAAPYRVCAIYLVLLTIGGIGAALFMD DVVAHRTGLSLNNLRSILTVPDSWTISLLYMCASGSFLGFAFAFGQVLQHNFAAAGETQAHASLHAAQIA FIGPLLGSLARNVGGKLSDRFGGGHVTLTVFSAAILAGGFLVGVSIYADEAEERGDPVSGFMMAGYIVGF IALFIVCGAGKGAVYKLIPSVFEERSRGLSLNAAQRHHWARVRSGALIGFAGSFGALGGVGINMALRQSY VSTGTETPAFWIFFACYIGAAILTWVRYVRPTETAAGAAGRPLHFRHPHPSRRQSRPPNQPRRSRSRPEL DRGVAYPMPPSRGGE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_0927 | narK3_3 | - | 100% (506) | nitrite extrusion protein, NarK3_3 |
M. ulcerans Agy99 | MUL_3265 | narK3 | e-171 | 63.58% (464) | integral membrane nitrite extrusion protein NarK3 |
M. ulcerans Agy99 | MUL_1189 | narU | 3e-57 | 31.18% (465) | integral membrane nitrite extrusion protein NarU |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0267c | narK3 | 1e-154 | 58.17% (459) | integral membrane nitrite extrusion protein NarK3 |
M. gilvum PYR-GCK | Mflv_3015 | - | 1e-119 | 49.02% (459) | nitrite extrusion protein |
M. tuberculosis H37Rv | Rv0261c | narK3 | 1e-154 | 58.17% (459) | integral membrane nitrite extrusion protein NarK3 |
M. leprae Br4923 | MLBr_00844 | narK | 1e-141 | 53.78% (450) | putative nitrite extrusion protein |
M. abscessus ATCC 19977 | MAB_3523c | - | 1e-123 | 48.81% (461) | integral membrane nitrite extrusion protein NarK3 |
M. marinum M | MMAR_4257 | narK3_3 | 0.0 | 96.26% (481) | nitrite extrusion protein, NarK3_3 |
M. avium 104 | MAV_2079 | - | 1e-179 | 68.43% (453) | transporter, major facilitator family protein |
M. smegmatis MC2 155 | MSMEG_0433 | - | 1e-157 | 59.51% (447) | nitrite extrusion protein |
M. thermoresistible (build 8) | TH_0644 | narK2 | 1e-06 | 23.96% (192) | POSSIBLE NITRATE/NITRITE TRANSPORTER NARK2 |
M. vanbaalenii PYR-1 | Mvan_3492 | - | 1e-61 | 33.55% (456) | nitrite transporter |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3015|M.gilvum_PYR-GCK ------------------------------MTWAFTGVMAKRTRDIDTWD MAB_3523c|M.abscessus_ATCC_199 -----------------------------MANNTATAPIARRGRWIENWD MUL_0927|M.ulcerans_Agy99 ---------------------------------------MARSR-ITDWH MMAR_4257|M.marinum_M ---------------------------------------MARSR-ITDWH MAV_2079|M.avium_104 ---------------------------------------MARTRRIAHWD Mb0267c|M.bovis_AF2122/97 ---------------------------------------MGRSHQISDWD Rv0261c|M.tuberculosis_H37Rv ---------------------------------------MGRSHQISDWD MSMEG_0433|M.smegmatis_MC2_155 ------------------------------------MPTLLKPKRITNWD MLBr_00844|M.leprae_Br4923 MDQLVLLQAEESLYGPGRRSKTVPIDHRHSLKSSFFRLRLRRACRISHWD Mvan_3492|M.vanbaalenii_PYR-1 ------------------MTVTDSESTGALATAAPAPERHRGKHWIDDWR TH_0644|M.thermoresistible__bu -------------------------------------------------- Mflv_3015|M.gilvum_PYR-GCK PEDVQAWEGTGGKAPGKEIAKRNLIWSIVAEHVGFSVWSIWSVMVLFMPQ MAB_3523c|M.abscessus_ATCC_199 PEDVVAWD-NG----GAKIARRNLIWSVVAEHVGFSVWSIWSVMVLFMPQ MUL_0927|M.ulcerans_Agy99 PEDTVAWANGN-----YAIARRNLTWLVLNAHIAFSVWYLWSVMVLFMPQ MMAR_4257|M.marinum_M PEDTVAWANGN-----YAIARRNLTWLVLNAHIAFSVWYLWSVMVLFMPQ MAV_2079|M.avium_104 PEDLVAWEAGN-----KLIARRNLIWSIATMHVAFSIWYLWSVMVLFMPQ Mb0267c|M.bovis_AF2122/97 PEDSVAWEAGN-----KFIARRNLIWSVAAEHVGFSVWSLWSVMVLFMPT Rv0261c|M.tuberculosis_H37Rv PEDSVAWEAGN-----KFIARRNLIWSVAAEHVGFSVWSLWSVMVLFMPT MSMEG_0433|M.smegmatis_MC2_155 PEDVAAWEAGN-----KYVARRNLIWSVVAEHIGFSIWSIWSVMVLFMPE MLBr_00844|M.leprae_Br4923 PEDQAAWEAGN-----KTIARLNLLWSVLTVHLGYSVWTLWPVMELFMPK Mvan_3492|M.vanbaalenii_PYR-1 PEDPEFWATTG-----KPVARRNLIFSIFAEHIGFSVWLLWSIVVVQMTA TH_0644|M.thermoresistible__bu -----------------MIGPLSTTYAVDIS------------------- :. . : : Mflv_3015|M.gilvum_PYR-GCK DVYG--------IDAAGKFYLVAVPTLVGAFMRIPYTIAPARFGGRNWTI MAB_3523c|M.abscessus_ATCC_199 NVYH--------IDAAGKFFLVAMPTLVGAVLRLPYTFATAWFGGRNWTV MUL_0927|M.ulcerans_Agy99 SIYG--------FTTGDKLLLDATASLVGALVRIPYAMAANWFGGSTWTT MMAR_4257|M.marinum_M SIYG--------FTTGDKLLLDATASLVGALVRIPYAMAANWFGGSTWTT MAV_2079|M.avium_104 ARYG--------FTTGDKLLVGATAALVGALVRIPYAMGTARLGGRNWAV Mb0267c|M.bovis_AF2122/97 SVYG--------FSAGDKFLLGATATLVGACLRFPYTFATAKFGGRNWTI Rv0261c|M.tuberculosis_H37Rv SVYG--------FSAGDKFLLGATATLVGACLRFPYTFATAKFGGRNWTI MSMEG_0433|M.smegmatis_MC2_155 AVYG--------FSAGDKFLLGATATLVGSCLRIPYTLATATFGGRNWTV MLBr_00844|M.leprae_Br4923 DVYG--------FSAGDKFLLATTATLVGACLRVPYSLATALFGGRNWAI Mvan_3492|M.vanbaalenii_PYR-1 GADGSPAASGFALTTTQALWLVAVPSGVGAFLRLPYTFAVPVFGGRNWTV TH_0644|M.thermoresistible__bu ------------LSSAEASMLVATPILVGAVGRIVVGSLTDRYGGRAMFI : : : : . **: *. ** Mflv_3015|M.gilvum_PYR-GCK VSALLLLIPTVLAYYYMKNPAS-YTTYMVIAAFAGLGGGNFASSMTNINA MAB_3523c|M.abscessus_ATCC_199 FSALVLAVPTALTLYFMAHPETSYTTFMIVAAVAGFGGGNFASSMTNINA MUL_0927|M.ulcerans_Agy99 ISSLVLLIPTLGTIVLLAHPGLPLWLYLVCAAFTGLGGGNYSGSLAKVDG MMAR_4257|M.marinum_M ISSLVLLIPTLGTIVLLAHPGLPLWPYLVCAAFTGLGGGNYSGSLAKVDG MAV_2079|M.avium_104 LSSLVLLIPTLAAIVLLAHPGLPLWPYLVCAALTGLGGGNYAAALANVES Mb0267c|M.bovis_AF2122/97 FSALVLLIPTVGSILLLANPGLPLWPYLVCGALAGLGGGNFAASMTNINA Rv0261c|M.tuberculosis_H37Rv FSALVLLIPTVGSILLLANPGLPLWPYLVCGALAGLGGGNFAASMTNINA MSMEG_0433|M.smegmatis_MC2_155 FSALVLLIPTVMTVVLMANPGLPLWPYLVCAALAGFGGGNFASSMTNINA MLBr_00844|M.leprae_Br4923 FSVMVLLIPTIATMVLLAHPGLPLWPYLACAALTGLGGGNFAASMTNANA Mvan_3492|M.vanbaalenii_PYR-1 ISALLLLIPCLGLAWAVSNPDINFAVLLLIAATAGFGGGNFASSMANISF TH_0644|M.thermoresistible__bu AITLASIVPVLAVG--AAGAAGSYPLLLVFGFFLGIAGTIFAVGIPFANN : :* . : . *:.* :: .:. . Mflv_3015|M.gilvum_PYR-GCK FYPQRLKGWALGLNAGGGNIGVPVIQLIGLMVIAAVGNTRPEIVCAIYLV MAB_3523c|M.abscessus_ATCC_199 FYPQRFKGWALGLNAGGGNIGVPVIQVIGLLVIATVGNRSPHWVAAIYLV MUL_0927|M.ulcerans_Agy99 LFPQRLKGFVLGLTGGMANLGSAAVQMVGLVVLATAGHAAPYRVCAIYLV MMAR_4257|M.marinum_M LFPQRLKGFVLGLTGGMANLGSAAVQMVGLVVLATAGHAAPYWVCAIYLV MAV_2079|M.avium_104 FFPQRRKGFALGLTGGVGNLGAAGIQAVGLVVLATAGNQAPYWVCAVYLV Mb0267c|M.bovis_AF2122/97 FFPQRLKGAALALNAGGGNLGVPMVQLVGLLVIATAGDREPYWVCAIYLV Rv0261c|M.tuberculosis_H37Rv FFPQRLKGAALALNAGGGNLGVPMVQLVGLLVIATAGDREPYWVCAIYLV MSMEG_0433|M.smegmatis_MC2_155 FYPQRLKGWALGLNAGGGNIGVPMIQLVGLFVIATAGNRAPYWVCAVYLV MLBr_00844|M.leprae_Br4923 FYPHRLKGAAFGLAGGAGNLGVSVIQVVGMLVIASVGDRKPYIVCGLYVV Mvan_3492|M.vanbaalenii_PYR-1 FYPESEKGWALGLNAAGGNIGVAVAQKIIPVVVTLGAGVALSLAGLFYIP TH_0644|M.thermoresistible__bu WYAPSRRGFATGVFG-MGMVGTALSAFFTPRFVESFGLFTTHVIIAVALG :. :* . .: . . :* . . .: . . : Mflv_3015|M.gilvum_PYR-GCK AISGAAVGAALFMDNLRNQK--SNFGALV----EAMRFKHSWVMSFLYIG MAB_3523c|M.abscessus_ATCC_199 LIAFAAVGAALFMDNLADQK--TDGRSLI----DVMKYRDSWIIAFLYIG MUL_0927|M.ulcerans_Agy99 LLTIGGIGAALFMDDVVAHRTGLSLNNLR----SILTVPDSWTISLLYMC MMAR_4257|M.marinum_M LLTIGGIGAALFMDDVVAHRTGLSLNNLR----SILTVPDSWTISLLYMC MAV_2079|M.avium_104 LLALVGAGAALFMDNLDHS---VEVGHVR----SVLTVPDTWTISFLYMC Mb0267c|M.bovis_AF2122/97 LLAVAGLGAALYMDNLTEYR--IELNTMR----AVVSEPHTWVISLLYIG Rv0261c|M.tuberculosis_H37Rv LLAVAGLGAALYMDNLTEYR--IELNTMR----AVVSEPHTWVISLLYIG MSMEG_0433|M.smegmatis_MC2_155 ALAVAGLGAALYMDNLEHHK--IDLGAMK----AILGERDTWIISLLYIG MLBr_00844|M.leprae_Br4923 LLIIAGIGAMLFMNDIEHHR--IGVNTIRPVLFVVVSTRDSWVLALLYLA Mvan_3492|M.vanbaalenii_PYR-1 FTVAAAVCAFLFMNNLTEAK--ADVKPVW----ESLRHADTWIMSLLYIG TH_0644|M.thermoresistible__bu LTALLCLVAMHDSPDFTPNT-ERVLPKLK----AAARLPVTWEMSILYAI * :. : :* :::** Mflv_3015|M.gilvum_PYR-GCK TFGSFIGFSFAFGQVLQINYLAG--------GDTPAQASLHAAQIAFLGP MAB_3523c|M.abscessus_ATCC_199 TFGSFIGFSFAFGQVLQLNFLAGLAHSGVTPAQAAAQASLHAAQIAFIGP MUL_0927|M.ulcerans_Agy99 ASGSFLGFAFAFGQVLQHNFAAA--------GETQAHASLHAAQIAFIGP MMAR_4257|M.marinum_M ASGSFLGFAFAFGQVLQHNFAAA--------GETQAHASLHAAQIAFIGP MAV_2079|M.avium_104 ASGSFIGFAFAFGQVIAHNLIAG--------GQTHGQAALHAAEIAFAGP Mb0267c|M.bovis_AF2122/97 TFGSFIGFSFAFGQVLQINFIAS--------GQSTAQASLHAAQIAFLGP Rv0261c|M.tuberculosis_H37Rv TFGSFIGFSFAFGQVLQINFIAS--------GQSTAQASLHAAQIAFLGP MSMEG_0433|M.smegmatis_MC2_155 TFGSFIGFAFAFGQVLQINFISG--------GQTPAQASLHAAQIAFIGP MLBr_00844|M.leprae_Br4923 SFGSFIGFSFAFGQVLETNFVAG--------GQSTAQAALHAAELAFIGP Mvan_3492|M.vanbaalenii_PYR-1 TFGSFIGYSAAFPTLLKAVFDRG----------------DIALMWAFLGA TH_0644|M.thermoresistible__bu VFGGFVAFSNYLPTYXPSSPACT--------------------------- *.*:.:: : Mflv_3015|M.gilvum_PYR-GCK LLGSISRPFGGKLADRVGGGRITLYVFVAMIF-AAGVLVATGVMDDAA-- MAB_3523c|M.abscessus_ATCC_199 LLGSLARPFGGWLSDRTGGGKISLYAFIAMIF-GAGILVAAGTISDRG-- MUL_0927|M.ulcerans_Agy99 LLGSLARNVGGKLSDRFGGGHVTLTVFSAAIL-AGGFLVGVSIYADEAEE MMAR_4257|M.marinum_M LLGSLARIVGGKLSDRFGGGHVTLTVFSAAIL-AGGFLVGVSIYADAAEE MAV_2079|M.avium_104 LLGSMARVVGGKLGDRFDGGRVTLTVLAAMIV-AGGFLVAVSTHDDLTRP Mb0267c|M.bovis_AF2122/97 LLGSLSRIYGGKLADRIGGGRVTLAAFCAMLL-ATGILISASTFGDHL-- Rv0261c|M.tuberculosis_H37Rv LLGSLSRIYGGKLADRIGGGRVTLAAFCAMLL-ATGILISASTFGDHL-- MSMEG_0433|M.smegmatis_MC2_155 LLGSLSRVYGGKLADRIGGGRVTLAVFAGMIL-GAGLLVAVSTVSDGS-- MLBr_00844|M.leprae_Br4923 TLAAVARFWGGRLADRLGGSRVTLVVFGAMVF-AAGLLGVLGIIEGSR-- Mvan_3492|M.vanbaalenii_PYR-1 GIGSVARPLGGKLSDRVGGARITAVSFAMLAIGAAGALWS---------- TH_0644|M.thermoresistible__bu -ITTCTSTPPPRHSTRFGSG------------------------------ : : : . * ... Mflv_3015|M.gilvum_PYR-GCK -AGAPTSAQMIGYVAGFILLFILSGLGNGSTYKMIPSIFEAKAQGRDDLD MAB_3523c|M.abscessus_ATCC_199 -AGAPSGSIMTAYVIGFIILFVVSGIGNGSVYKMIPSVFAAKARSAG-LD MUL_0927|M.ulcerans_Agy99 RGDPVSGFMMAGYIVGFIALFIVCGAGKGAVYKLIPSVFEERSRGLS-LN MMAR_4257|M.marinum_M RGDPVTGFMMAGYIVGFIALFIVCGAGKGAVYKLIPSVFEERSRGLS-LN MAV_2079|M.avium_104 SGAPVSLYTTAGYIAGFIALFICCGVGKGSVFKLIPSVFAQRSRALE-LG Mb0267c|M.bovis_AF2122/97 -AGPMPTATMVGYVIGFTALFILSGIGNGSVYKMIPSIFEARSHSLQ-IS Rv0261c|M.tuberculosis_H37Rv -AGPMPTATMVGYVIGFTALFILSGIGNGSVYKMIPSIFEARSHSLQ-IS MSMEG_0433|M.smegmatis_MC2_155 -SEAATGLMMSGYVVGFIALFLLSGIGNGSVYKMIPSIFEARSHSLD-VS MLBr_00844|M.leprae_Br4923 -VCPIRGVMMASYFAGFITLFILSGLGNGSVYKMIPTIFEACSHSLG-IN Mvan_3492|M.vanbaalenii_PYR-1 ----VQAKNMPVFFIAFMFLFVATGIGNGSTYRMISKIFRVKGEDAG--G TH_0644|M.thermoresistible__bu ----------------------PGRSGPAGSWPMCSPPRNPVTTAGS--- * .. : : . Mflv_3015|M.gilvum_PYR-GCK KEGKAAWSRAMSGALIGFAGAVGALGGVFINVVLRASYVGDAKSATAAFW MAB_3523c|M.abscessus_ATCC_199 ET----WSRTMSGALIGVAGAIGALGGVAINLVLRASYLSAAKSATMAFW MUL_0927|M.ulcerans_Agy99 AAQRHHWARVRSGALIGFAGSFGALGGVGINMALRQSYVSTG-TETPAFW MMAR_4257|M.marinum_M AAQRHHWARVRSGALIGFAGSFGALGGVGINMALRQSYVSTG-TETPAFW MAV_2079|M.avium_104 DTERRHWERARSAALIGFAGSFGALGGVVINLALRQSYASTG-SSTPAFG Mb0267c|M.bovis_AF2122/97 EAERRQWSRSMSGALIGLAGAVGALGGVGVNLALRESYLTSG-TATSAFW Rv0261c|M.tuberculosis_H37Rv EAERRQWSRSMSGALIGLAGAVGALGGVGVNLALRESYLTSG-TATSAFW MSMEG_0433|M.smegmatis_MC2_155 EDERRHWSRSMSGALIGFAGAVGALGGVGINMALRQSYLSSG-SATTAFW MLBr_00844|M.leprae_Br4923 DDECRDWSRVISGVVIGFVAEVGALGGVGIDLALRESYLNTG-GVTAAFW Mvan_3492|M.vanbaalenii_PYR-1 DPLTMLHMRRQAAGALGIISSVGAFGGFIVPLAYAWSKSQFG-NIQPALQ TH_0644|M.thermoresistible__bu --GRSAITRRSRGHWIGVRSTR------------SHPMCRCGCSTAAACC * . :*. . . . * Mflv_3015|M.gilvum_PYR-GCK VFLAFYVVCAFVTWFVFLRLQEH------------------RAHSGEHIG MAB_3523c|M.abscessus_ATCC_199 VFLVFYVICAAVTWYAYVRRPMT------------------VSVP--AIS MUL_0927|M.ulcerans_Agy99 IFFACYIGAAILTWVRYVRPTETAAGAAGRPLHFRHPHPSRRQSRPPNQP MMAR_4257|M.marinum_M IFFACYIGAAILTWVRYVRPTETAAGAAGRPAPLPASAP-QPSAESAAEP MAV_2079|M.avium_104 AFMLCYVAAAALTWARYVRPRRAPE----------------PRTAPDWQP Mb0267c|M.bovis_AF2122/97 AFGVFYLVASVLTWAIYVRRGLK------------------SAGELVPAT Rv0261c|M.tuberculosis_H37Rv AFGVFYLVASVLTWAIYVRRGLK------------------SAGELVPAT MSMEG_0433|M.smegmatis_MC2_155 TFLAFYVLASVVTWFCYVRR---------------------PAAMPVTGT MLBr_00844|M.leprae_Br4923 IFMLCYAAAGVLTWKMYVCRPLPGN-------------LHDEAANAFAAS Mvan_3492|M.vanbaalenii_PYR-1 FYVGFFIVLLGVTWFFYMRKGTR--------------------------- TH_0644|M.thermoresistible__bu GR------------------------------------------------ Mflv_3015|M.gilvum_PYR-GCK RTSAPVPVG--------------- MAB_3523c|M.abscessus_ATCC_199 SSKNEVAV---------------- MUL_0927|M.ulcerans_Agy99 RRSRSRPELDRGVAYPMPPSRGGE MMAR_4257|M.marinum_M TGAESITT---------------- MAV_2079|M.avium_104 MAEQPVSS---------------- Mb0267c|M.bovis_AF2122/97 TAPAGLAYV--------------- Rv0261c|M.tuberculosis_H37Rv TAPAGLAYV--------------- MSMEG_0433|M.smegmatis_MC2_155 ERHAPAIAG--------------- MLBr_00844|M.leprae_Br4923 VGASRTHRG--------------- Mvan_3492|M.vanbaalenii_PYR-1 MAQAGV------------------ TH_0644|M.thermoresistible__bu ------------------------