For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LGRYTCGLDAAMAVVDGKWKPLILWELQDGPKRFNALHRSLDGISQKMLTQHLKELQRHGVVHRESYHEV PPRVEYSMTPAGVELLDALNPLGLWAEKHIDLICAADTA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6344 | - | - | 100% (109) | transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_2905 | - | 4e-23 | 45.28% (106) | transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_2849 | - | 3e-17 | 42.31% (104) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1754c | - | 3e-09 | 35.05% (97) | hypothetical protein Mb1754c |
M. gilvum PYR-GCK | Mflv_5238 | - | 2e-13 | 39.39% (99) | HxlR family transcriptional regulator |
M. tuberculosis H37Rv | Rv1725c | - | 3e-09 | 35.05% (97) | hypothetical protein Rv1725c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3696c | - | 5e-16 | 39.53% (86) | putative transcriptional regulator |
M. marinum M | MMAR_1626 | - | 2e-10 | 34.74% (95) | transcriptional regulator |
M. avium 104 | MAV_4183 | - | 6e-07 | 30.93% (97) | putative transcriptional regulator family protein |
M. thermoresistible (build 8) | TH_2405 | - | 3e-08 | 28.43% (102) | putative transcriptional regulator |
M. ulcerans Agy99 | MUL_3410 | - | 6e-10 | 33.68% (95) | transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_1032 | - | 2e-13 | 37.89% (95) | HxlR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_6344|M.smegmatis_MC2_155 --------------MGRYTCGLDAAMAVVDGKWKPLILWELQDGPKRFNA MAB_3696c|M.abscessus_ATCC_199 MYPSSQPTDDWWGNLFDTQCPTRIVLDRIGDKWTVLVVAALADGPMRFTA Mb1754c|M.bovis_AF2122/97 ------------MQPYGQYCPVARAAELLGDRWTLLIVRELLFGPLRFTE Rv1725c|M.tuberculosis_H37Rv ------------MQPYGQYCPVARAAELLGDRWTLLIVRELLFGPLRFTE MMAR_1626|M.marinum_M ------------MSTYSQFCPVAKAMELLDERWTLLVVRELLLGSTHFND MUL_3410|M.ulcerans_Agy99 ------------MSTYSQFCPVAKAMELLDERWTLLVVRELLLGSTHFND Mflv_5238|M.gilvum_PYR-GCK ----MGRLADVSRRTYGQYCGLAHALDVVGERWTLLIVRELASGPKRYTE Mvan_1032|M.vanbaalenii_PYR-1 ----MSTIVGMTRRSYGQFCGLAHALDVVGERWTLLIVRELGSGPKRYGE TH_2405|M.thermoresistible__bu ----------MASRTYGQHCALAKSLDLVGDRWTLLIVRELLDGPRRYSD MAV_4183|M.avium_104 MTLLQGPLADRDAWSAVGECAIEKTMAVVGTKSAMLIMREAYYGTTRFDD * :. : *:: *. :: MSMEG_6344|M.smegmatis_MC2_155 LHRSLDGISQKMLTQHLKELQRHGVVHRE--SYHEVPPRVEYSMTPAGVE MAB_3696c|M.abscessus_ATCC_199 LRDRIGGVTGKVLTSTLRSMLRDGLVKRT--AYATVPPKVEYQLTELGLS Mb1754c|M.bovis_AF2122/97 IERGLPGISRSVLAQRLRRLQHDRIIEAV-----PEHTGGGYRFTVAGEE Rv1725c|M.tuberculosis_H37Rv IERGLPGISRSVLAQRLRRLQHDRIIEAV-----PEHTGGGYRFTVAGEE MMAR_1626|M.marinum_M LRRGVPKMSPALLSKRLKSLTKAGVVERS-----DIEGRTSYSLTTCGRE MUL_3410|M.ulcerans_Agy99 LRRGVPKMSPALLSKRLKSLTKAAVVERS-----DIEGRTSYSLTTCGRE Mflv_5238|M.gilvum_PYR-GCK LADALAGIGTSLLATRVRQLETDGVVQRRL-ALDQPGSTVVYELSDAGRE Mvan_1032|M.vanbaalenii_PYR-1 LADALAGIGTSLLATRMRQLETDGVIQRRL-DLDQPGSAVVYELSDAGRE TH_2405|M.thermoresistible__bu LLTALRPIATDMLATRLRHLEEHHLVRRR--ELPKPASGTVYELTADGAA MAV_4183|M.avium_104 FARRVG-ITKAATSARLAELVELGLLKRRPYREPGQRSRDEYVLTQAGID : : : : : : ::. * :: * MSMEG_6344|M.smegmatis_MC2_155 LLDALNPLGLWAEK------------------------------------ MAB_3696c|M.abscessus_ATCC_199 LREPIDQLRTWAER------------------------------------ Mb1754c|M.bovis_AF2122/97 LRPVLQTLGDWVSR--WLMADPTPAECDPELLTLWISRRVNTEALPGRRV Rv1725c|M.tuberculosis_H37Rv LRPVLQTLGDWVSR--WLMADPTPAECDPELLTLWISRRVNTEALPGRRV MMAR_1626|M.marinum_M LATVVDALGEWGIR--WIP-ELGDEDLDPHLLMWDIRRTVPIDAWPRART MUL_3410|M.ulcerans_Agy99 LATVVDALGEWGIR--WIP-ELGDEDLDPHLLMWDIRRTVPIDAWPRART Mflv_5238|M.gilvum_PYR-GCK LAAAVVPLAMWGARHQMADADVCHEAFRAEWLLSFLAADVRRDGPHDLDA Mvan_1032|M.vanbaalenii_PYR-1 LAEAMIPLAMWGARHQMSHADPCAEAFRAEWLLAFLAADLRGGIPEGLAS TH_2405|M.thermoresistible__bu LEAVVHAFIRWGR--SLLETRRAGDVVRPHWLARAVRAHVR---PDRTGP MAV_4183|M.avium_104 FMPVVWAMFEWGRR------------------------------------ : : : * MSMEG_6344|M.smegmatis_MC2_155 ---------------------------------------------HIDLI MAB_3696c|M.abscessus_ATCC_199 ---------------------------------------------NVAHI Mb1754c|M.bovis_AF2122/97 VVEFRYHGERPLWA--WLVLEPGDISVCLHDPCLPVDLTVRGHPRDLYRV Rv1725c|M.tuberculosis_H37Rv VVEFRYHGERPLWA--WLVLEPGDISVCLHDPCLPVDLTVRGHPRDLYRV MMAR_1626|M.marinum_M VLAFRLAGVAPKAARWWLLVSEGEADVCDFDPGYQVAATVETSLLTLTQL MUL_3410|M.ulcerans_Agy99 VLAFRLAGVAPKAARWWLLVSEGEADVCDFDPGYQVAATVETSLLTLTQL Mflv_5238|M.gilvum_PYR-GCK VYEFHIDDSTACLR-----LRDGGVTVTPGAPATPGDVVVRSRASTIAEI Mvan_1032|M.vanbaalenii_PYR-1 VYEFHVDDSTACLQ-----IRDGRVSVRPGPCATPADVTVRATARAIAAV TH_2405|M.thermoresistible__bu PLSVRLVTPEGAAA-----VRISADAVEDLDDDTAVDVTLTGAAEVLAAA MAV_4183|M.avium_104 ------------------------------------HLPGRHRLQLTHLG MSMEG_6344|M.smegmatis_MC2_155 CAADTA-------------------------------------------- MAB_3696c|M.abscessus_ATCC_199 VRNREAHDGDMPSTDTAIG------------------------------- Mb1754c|M.bovis_AF2122/97 YSGRSTLAAEISAERIELDGLPAMRRAFPSWMAWSPFAPAMRQAVVSVDQ Rv1725c|M.tuberculosis_H37Rv YSGRSTLAAEISAERIELDGLPAMRRAFPSWMAWSPFAPAMRQAVVSVDQ MMAR_1626|M.marinum_M WRGDQSWSRAMLNGGVRIDGPAQVRRSVPAWLGQSRLAAVPRPA------ MUL_3410|M.ulcerans_Agy99 WRGDQSWSRAMLNGGVRIDGPAQVRRSVPAWLGQSRLAAVPRPA------ Mflv_5238|M.gilvum_PYR-GCK VGHKIAVADALADGSLEITGDADKISALVGVIEKRLAR------------ Mvan_1032|M.vanbaalenii_PYR-1 VGQKDRLEDAVAEGRIEVTGDPAAIATLIGAVEKRLA------------- TH_2405|M.thermoresistible__bu L-HPDRAAELVAQGRLRVDGRADALRRLAEVVTAPAGRAVPDRS------ MAV_4183|M.avium_104 CGAEVGVEIRCAEGHLVPPDELGMRLAKKSG------------------- MSMEG_6344|M.smegmatis_MC2_155 ------- MAB_3696c|M.abscessus_ATCC_199 ------- Mb1754c|M.bovis_AF2122/97 MPEAHGG Rv1725c|M.tuberculosis_H37Rv MPEAHGG MMAR_1626|M.marinum_M ------- MUL_3410|M.ulcerans_Agy99 ------- Mflv_5238|M.gilvum_PYR-GCK ------- Mvan_1032|M.vanbaalenii_PYR-1 ------- TH_2405|M.thermoresistible__bu ------- MAV_4183|M.avium_104 -------