For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AGRVEGKVAFITGAARGQGRSHAVRLAEEGADIIAVDVCRRISSNEDIPASTPEDLAETVELVKGLNRRI VAEEVDVRDYDALKAVVDSGVEQLGGLDIVVANAGIGNGGATLDKTSEADWDDMIGVNLSGVWKTVKAAV PHLISGGNGGSIILTSSVGGLKAYPHTGHYIAAKHGVVGLMRTFAVELGQHSIRVNSVHPTNVNTPLFMN EGTMKLFRPDLENPGPDDMAVVAQMMHVLPVGWVEPRDISNAVLFLASDEARYVTGLPMTVDAGSMLK*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6031 | - | - | 100% (279) | carveol dehydrogenase |
M. smegmatis MC2 155 | MSMEG_4849 | - | e-123 | 75.44% (281) | carveol dehydrogenase |
M. smegmatis MC2 155 | MSMEG_1410 | fabG | 2e-68 | 47.69% (281) | 3-ketoacyl-(acyl-carrier-protein) reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0706 | fabG | 1e-67 | 47.64% (275) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. gilvum PYR-GCK | Mflv_1589 | - | 1e-139 | 86.74% (279) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv0687 | fabG | 1e-67 | 47.64% (275) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. leprae Br4923 | MLBr_01740 | - | 6e-23 | 30.91% (220) | short chain dehydrogenase |
M. abscessus ATCC 19977 | MAB_0072c | - | 5e-78 | 53.62% (276) | putative short chain dehydrogenase/reductase |
M. marinum M | MMAR_4754 | - | 1e-127 | 78.14% (279) | short-chain type dehydrogenase/reductase |
M. avium 104 | MAV_0846 | - | 1e-138 | 86.02% (279) | carveol dehydrogenase |
M. thermoresistible (build 8) | TH_3237 | - | 1e-134 | 82.08% (279) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_3392 | fabG | 8e-61 | 46.98% (281) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. vanbaalenii PYR-1 | Mvan_5168 | - | 1e-138 | 86.38% (279) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment Mb0706|M.bovis_AF2122/97 -MSARGGSLHGRVAFVTGAARAQGRSHAVRLAREGADIVALDICAPVSGS Rv0687|M.tuberculosis_H37Rv -MSARGGSLHGRVAFVTGAARAQGRSHAVRLAREGADIVALDICAPVSGS Mflv_1589|M.gilvum_PYR-GCK ----MGGRVEGKVAFITGAARGQGRSHAVRLAEEGADIIAIDVCGPISTH Mvan_5168|M.vanbaalenii_PYR-1 ----MGGRVEGKVAFITGAARGQGRSHAVRLAEEGADIIAIDVCGPISTH MSMEG_6031|M.smegmatis_MC2_155 ----MAGRVEGKVAFITGAARGQGRSHAVRLAEEGADIIAVDVCRRISSN MAV_0846|M.avium_104 ----MGGRVEGKVAFITGAARGQGRSHAVRLAQEGADIIAVDICAPISSN TH_3237|M.thermoresistible__bu ----MAGRLEGKVAFITGAARGQGRAHAVRMAQEGADIIAVDICRQIDS- MMAR_4754|M.marinum_M MTEQLGGRVAGKVAFITGAARGQGRSHAVRLAQEGADIIAVDVCKPIVEN MAB_0072c|M.abscessus_ATCC_199 ----MTGRLTGKVALVTGAARGIGRAQAVRFAQEGADIIALDICAPVHT- MUL_3392|M.ulcerans_Agy99 MSRPLDGPLSGRVAFITGAARGQGRAHALRLARDGADVIAVDLCDQIAS- MLBr_01740|M.leprae_Br4923 -MVKTAQYFVGKRCFVTGAASGIGRATALRLAAYGAELYLTDR------- . *: .::**** . **: *:*:* **:: * Mb0706|M.bovis_AF2122/97 VTYPPATSEDLGETVRAVEAEGRKVLA-REVDIRDDAELRRLVADGVEQF Rv0687|M.tuberculosis_H37Rv VTYPPATSEDLGETVRAVEAEGRKVLA-REVDIRDDAELRRLVADGVEQF Mflv_1589|M.gilvum_PYR-GCK TDIPPATPDDLAQTVDLVKGTGRRIVS-EQVDVRDFAAVKAAVDSGVEQL Mvan_5168|M.vanbaalenii_PYR-1 TDIPAATPDDLAQTVDLVKGIGRRVVA-AEVDVRDYAAVKAAVDSGVEQL MSMEG_6031|M.smegmatis_MC2_155 EDIPASTPEDLAETVELVKGLNRRIVA-EEVDVRDYDALKAVVDSGVEQL MAV_0846|M.avium_104 SQIPPSTPDDLAETADLIKGLDRRIVT-AEVDVRDYDALKAAVDSGVEQL TH_3237|M.thermoresistible__bu VQIPLASPEDLAETADLVKGLNRRIYT-AEVDVRDFDALKAAVDTGVEQL MMAR_4754|M.marinum_M TTIPASTPEDLAETADLVKGHNRRIFT-AEADVRDYDALKAAVDAGVDEL MAB_0072c|M.abscessus_ATCC_199 TITPPATRADLDKTSELVESAGRRVIP-GVVDVRNLRDVQTFTQDAVTEF MUL_3392|M.ulcerans_Agy99 VPYPLGTAEELATTVKLVEDTGARIVA-SQADVRDREALAAALQAGIDEL MLBr_01740|M.leprae_Br4923 ------HCDGLAQTVSEARALGAQVPEYRALDISDYDEVAAFGADIHARH * * . . :: *: : : . Mb0706|M.bovis_AF2122/97 GRLDIVVANAGVLGWGRLWELT-DEQWETVIGVNLTGTWRTLRATVPAMI Rv0687|M.tuberculosis_H37Rv GRLDIVVANAGVLGWGRLWELT-DEQWETVIGVNLTGTWRTLRATVPAMI Mflv_1589|M.gilvum_PYR-GCK GRLDIVVANAGIGNGGQTLDHTSEEDWNDMIDVNLSGVWKSVKAAVPHLL Mvan_5168|M.vanbaalenii_PYR-1 GRLDIVVANAGIGNGGQTLDHTSEEDWNDMIDVNLSGVWKSVKAAVPHLL MSMEG_6031|M.smegmatis_MC2_155 GGLDIVVANAGIGNGGATLDKTSEADWDDMIGVNLSGVWKTVKAAVPHLI MAV_0846|M.avium_104 GRLDIICANAGIGNGGQTLDKTSEDDWRDMIDVNLSGVWKTVKAGVPHLI TH_3237|M.thermoresistible__bu GRLDIIVANAGIGNGGETLDKTSEGDWTDMIDVNLAGVWKTVKAGVPHIL MMAR_4754|M.marinum_M GRLDIIVANAGIGNGGATLDKTSEHDWQEMIDVNLSGVWKSVKAAVPHLI MAB_0072c|M.abscessus_ATCC_199 GGLDIVCATAGITSRRMLLDMP-ESDWQTMLDVNLTGVWHTTRAATPHLI MUL_3392|M.ulcerans_Agy99 GQVDIVVANAGIAP-----MQSGDDGWRDVIDVNLSGAYYTVEVAIPTMI MLBr_01740|M.leprae_Br4923 PSMDIVMNIAGVSVWG-TVDRLTHDQWSNVVAINLMGPIHIIETFVPAIL :**: **: . * :: :** * .. * :: Mb0706|M.bovis_AF2122/97 DAGNGGSIVVVSSSAGLKATPGNGH----YAASKHALVALTNTLAIELGE Rv0687|M.tuberculosis_H37Rv DAGNGGSIVVVSSSAGLKATPGNGH----YAASKHALVALTNTLAIELGE Mflv_1589|M.gilvum_PYR-GCK AGGNGGSIILTSSVGGLKPYPHTGH----YIAAKHGVIGLMRTFAVELGQ Mvan_5168|M.vanbaalenii_PYR-1 SGGRGGSIILTSSVGGLKPYAHTGH----YIAAKHGVIGLMRTFAVELGQ MSMEG_6031|M.smegmatis_MC2_155 SGGNGGSIILTSSVGGLKAYPHTGH----YIAAKHGVVGLMRTFAVELGQ MAV_0846|M.avium_104 SQGQGGSVILTSSVGGLKAYPHTGH----YIAAKHGVVGLMRTFAVELGQ TH_3237|M.thermoresistible__bu AGGRGGSIILTSSVGGLKAYPHTGH----YVAAKHGVVGLMRTFAVELGQ MMAR_4754|M.marinum_M AGGNGGSIVLTSSVGGMKAYPHCGN----YVAAKHGVVGLMRSFAVELGQ MAB_0072c|M.abscessus_ATCC_199 ARG-GGAMVLVSSIAGLRGLVGVSH----YVAAKHGVVGLMRSLAIELAP MUL_3392|M.ulcerans_Agy99 EQGRGGSIVLISSAAGLVGISSADAGAIGYVASKHALVGLMRVYANLLAP MLBr_01740|M.leprae_Br4923 AAGRGGHLVNVSSAAGLVALPWHAA----YSASKYGLRGLSEVLRFDLAR * ** :: ** .*: * *:*:.: .* . *. Mb0706|M.bovis_AF2122/97 FGIRVNSIHPYSVDTPMIEPEAMIQTFAKHPG------YVHSFPPMPLQP Rv0687|M.tuberculosis_H37Rv FGIRVNSIHPYSVDTPMIEPEAMIQTFAKHPG------YVHSFPPMPLQP Mflv_1589|M.gilvum_PYR-GCK HSIRVNAVCPTNVNTPLFMNEGTMKLFRPDLENPGPDDLAVAAQFMHVLP Mvan_5168|M.vanbaalenii_PYR-1 HSIRVNAVCPTNVNTPLFMNEGTMKLFRPDLENPGPDDLAVAAQFMHVLP MSMEG_6031|M.smegmatis_MC2_155 HSIRVNSVHPTNVNTPLFMNEGTMKLFRPDLENPGPDDMAVVAQMMHVLP MAV_0846|M.avium_104 HFIRVNSVHPTNVNTPMFMNEGTMRLFRPDLKNPGPDDLEVAAQFMHVLP TH_3237|M.thermoresistible__bu HNIRVNSVHPTNVNTPLFMNEPTMKLFRPDLENPGPEDLKVVAQMMHTLP MMAR_4754|M.marinum_M HMIRVNSVHPTHVRTPMLHNEGTFKMFRPDLENPGPDDMAPICQLFHTLP MAB_0072c|M.abscessus_ATCC_199 HKIRVNTVHPTNVDTPMIQNEFVRTLFRPDLEQPTREDFAAAAKTMNLLD MUL_3392|M.ulcerans_Agy99 HSIRVNSLHPSGVDPPMINNEFIRHWLADLVAETGSG-----PGAGNALP MLBr_01740|M.leprae_Br4923 YRIGVSVVVPGAVRTPLVDTIEIAGVDRQDPRFSRWVDRFRGHAVSAERA . * *. : * * .*:. Mb0706|M.bovis_AF2122/97 KGFMTPDEISDVVVWLAGDGSGALSGNQ---------------------- Rv0687|M.tuberculosis_H37Rv KGFMTPDEISDVVVWLAGDGSGALSGNQ---------------------- Mflv_1589|M.gilvum_PYR-GCK VGWVEPRDISNAVLFLASDEARYVTGLP---------------------- Mvan_5168|M.vanbaalenii_PYR-1 VGWVEPVDISNAVLFLASDEARYITGLP---------------------- MSMEG_6031|M.smegmatis_MC2_155 VGWVEPRDISNAVLFLASDEARYVTGLP---------------------- MAV_0846|M.avium_104 VGWVEPVDISNAVLFLASDESRYITGLP---------------------- TH_3237|M.thermoresistible__bu IGWVEPEDIANAVLFLASDEARYITGVT---------------------- MMAR_4754|M.marinum_M IPWVEAEDISNAVLFLASDESRYITGVT---------------------- MAB_0072c|M.abscessus_ATCC_199 LPWVEPLDIANASLFLASDEARYITSVS---------------------- MUL_3392|M.ulcerans_Agy99 VQILQADDIAGALAWLVSDEARYITGVA---------------------- MLBr_01740|M.leprae_Br4923 AEKILAGVAKNRYLIYTSHDIRVLYGFKRLAWWPYGVVMKQVNVVFTRAL : . . ... : . Mb0706|M.bovis_AF2122/97 ----------IPVDKGALKY----------- Rv0687|M.tuberculosis_H37Rv ----------IPVDKGALKY----------- Mflv_1589|M.gilvum_PYR-GCK ----------VTVDAGSMLK----------- Mvan_5168|M.vanbaalenii_PYR-1 ----------VTVDAGSMLK----------- MSMEG_6031|M.smegmatis_MC2_155 ----------MTVDAGSMLK----------- MAV_0846|M.avium_104 ----------VTVDAGSMLK----------- TH_3237|M.thermoresistible__bu ----------LPVDGGSCLK----------- MMAR_4754|M.marinum_M ----------LPVDAGGCLK----------- MAB_0072c|M.abscessus_ATCC_199 ----------LPVDAGSTQR----------- MUL_3392|M.ulcerans_Agy99 ----------LPVDAGCVNKR---------- MLBr_01740|M.leprae_Br4923 RPSPATMRCVEPIKVGVYSQPRSGEGGKSGN .:. *