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M. smegmatis MC2 155 MSMEG_6018 (-)

annotation: xylose transport system permease protein XylH
coordinates: 6082847 - 6084166
length: 439

NTDTNSKDREMSIQAPSEKPTASEQPDAGGFAGDTRSDQTFGDAVRSYAQRVRGGDMGSLPAVLGLVVLF
VVFGLANDRFLSALNLANLITQAGSICVLAMGLVFVLLLGDIDLSAGVAGGVAACAMALAVVNLGWPWWA
AVLVAIACGAVIGLIIGVLRAKLGIPSFVVTLAFFLGLQGVTLKLIGEGGSVRVDNPVIRGLTIANLPVA
VGWTIALVVVLAFAGLEIYNYRRKKALQLTHSPLGVVVARAIAVAVVVLGVTFVLSVNRSVNPRVEIRGI
PYVLPLILLLLIGMTVLLRRTAYGRHIYAVGGNAEAARRAGISVDRIRVTAFIACSSLAALSGIIAASYA
GKVSASSGAGNTLLYAVGAAVIGGTSLFGGKGRALDAVIGGVVVATIANGLGLLNQSSYINFLVTGGVLL
LAAGVDAISRRRRSATGL*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6018--100% (439)xylose transport system permease protein XylH
M. smegmatis MC2 155MSMEG_1706-6e-4933.42% (386) xylose transport system permease protein XylH
M. smegmatis MC2 155MSMEG_4171-4e-3529.23% (390) ribose transport system permease protein RbsC

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_2606-5e-2325.59% (340) inner-membrane translocator
M. tuberculosis H37Rv-----
M. leprae Br4923MLBr_00397-2e-1831.82% (154) putative transporter protein
M. abscessus ATCC 19977MAB_2624c-2e-0528.93% (121) high-affinity branched-chain amino acid ABC transporter (LivM)
M. marinum M-----
M. avium 104-----
M. thermoresistible (build 8)TH_1081-2e-0825.00% (296) ABC transporter branched chain amino acid transport permease
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_5291-0.087.99% (408) inner-membrane translocator

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_6018|M.smegmatis_MC2_155      --------------------------------------------------
Mvan_5291|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_2606|M.gilvum_PYR-GCK          --------------------------------------------------
MLBr_00397|M.leprae_Br4923          MDHTTKCDAEQYFQAIVTSMADGVIVVDIDGRIESINPAATRILGLRAHD
TH_1081|M.thermoresistible__bu      --------------------------------------------------
MAB_2624c|M.abscessus_ATCC_199      --------------------------------------------------
                                                                                      

MSMEG_6018|M.smegmatis_MC2_155      -----------------------------MNTDTNSKDREMSIQAPSEK-
Mvan_5291|M.vanbaalenii_PYR-1       -------------------------------MTTVRSDSDVSLADAD---
Mflv_2606|M.gilvum_PYR-GCK          ----------------------------------MSTKEALDVGGHK---
MLBr_00397|M.leprae_Br4923          VVDMKHGHPFCFYDTDNQRVDLEREVMRVVRREVTTVSKVVGIDQHSGQR
TH_1081|M.thermoresistible__bu      -----------------------------------MTHQCVALYTCH---
MAB_2624c|M.abscessus_ATCC_199      ----------------------------------MSAARALAPGDSIRR-
                                                                            :         

MSMEG_6018|M.smegmatis_MC2_155      -------------------------PTASEQPDAGGFAGDTRSDQTFGDA
Mvan_5291|M.vanbaalenii_PYR-1       ------------------------------------FSGDTRADETFGAA
Mflv_2606|M.gilvum_PYR-GCK          ----------------------------------------VVRDERVKER
MLBr_00397|M.leprae_Br4923          LWLSVNVSLLAYKAPPHSALVVSFSDISAHHLSIERLTYEATHDCLTGLA
TH_1081|M.thermoresistible__bu      -----------------------------------------AADITFN--
MAB_2624c|M.abscessus_ATCC_199      ------------------------------------WWSELARPVQWVYG
                                                                                      

MSMEG_6018|M.smegmatis_MC2_155      VR-------------------SYAQRVRGGDMGSLPAVLGLVVLFVVFGL
Mvan_5291|M.vanbaalenii_PYR-1       VR-------------------GYLQRVRGGDMGSLPAVLGLVVLFVVFGL
Mflv_2606|M.gilvum_PYR-GCK          NR-------------------LQRLLIR-PEMGAGIGAIGIFVFFLVVAP
MLBr_00397|M.leprae_Br4923          NRRFAEDQITKSLQHDERSRLAAVLLLDLDDFKVINDSLGHDVGDAVLQT
TH_1081|M.thermoresistible__bu      -----------------------LQGLREGLLQLTIDGLSWGAIYALVAV
MAB_2624c|M.abscessus_ATCC_199      VVG-------------------FALLALLPVWKIPYLDTPNTSFGGVMAQ
                                                                                  :.  

MSMEG_6018|M.smegmatis_MC2_155      ANDRFLSALNLANLITQAG--SICVLAMG-----------------LVFV
Mvan_5291|M.vanbaalenii_PYR-1       ANDRFLSALNLANLITQAG--SICVLAMG-----------------LVFV
Mflv_2606|M.gilvum_PYR-GCK          P---FREASSLATVLYASS--TIGIMACG-----------------VAVL
MLBr_00397|M.leprae_Br4923          VAQRLRSAVRPDDVVARLGGDEFIVLLRGPLSDMNANDVAKRLHTTLSES
TH_1081|M.thermoresistible__bu      GYTLVYGVLKLINFAHAEV---FMLGMFG--------------------S
MAB_2624c|M.abscessus_ATCC_199      FAMVALIAIGLNVVVGQAG--LLDLGYVG------------------FYA
                                           .     .        : :   *                     

MSMEG_6018|M.smegmatis_MC2_155      LLLGDIDLSAGVAGGVAACA------MALAVVNLGWPWWAA---------
Mvan_5291|M.vanbaalenii_PYR-1       LLLGDIDLSAGVAGGVSACA------MALIVVNLSWPWWAA---------
Mflv_2606|M.gilvum_PYR-GCK          MIGGEFDLSAGVAVTFSSLA------ASMLAYNLHLNLWVG---------
MLBr_00397|M.leprae_Br4923          LVVDQLTVPIGASVGILEVRPDDRRRAADILRDADSAMYAAKNKKQCAVT
TH_1081|M.thermoresistible__bu      YFCLDVILGFTPRGNAYDLG------IGLTVLYLGIAMLFA---------
MAB_2624c|M.abscessus_ATCC_199      IGAYTVALLTSPDSPWNRMG-------TSAFFSSDWAWLSC---------
                                         . :                                          

MSMEG_6018|M.smegmatis_MC2_155      ---VLVAIACGAVIGLIIGVLRAKLGIPS-----FVVTLAFFLGLQGVTL
Mvan_5291|M.vanbaalenii_PYR-1       ---LLVGIACGALIGLAIGLLRAKLGIPS-----FVVTLAFFLGLQGVTL
Mflv_2606|M.gilvum_PYR-GCK          ---ALLALVLALTVGFFNGFLVMKTKIPS-----FLITLSTFFMLAGINL
MLBr_00397|M.leprae_Br4923          PQQLVPFVALIALFVFFTAAAGAKFYAPSNLLVILQQTVVLAIVGYGMTF
TH_1081|M.thermoresistible__bu      ---IAVSGTAAAGLEFIAYRPLRRRNAAR---------LSFLITAIGMSF
MAB_2624c|M.abscessus_ATCC_199      ---LPIAVAITACFGLILGTPTLRLRGDY---------LAIVTLGFGEII
                                            .    . :       :              :       *  :

MSMEG_6018|M.smegmatis_MC2_155      KLIGEGGSVRVDNPVIRGLTIANLPVAVGWTIALVVVLAFAGLEIYNYRR
Mvan_5291|M.vanbaalenii_PYR-1       KLIGEGGSVRVDDPVIRGLTISNLPVAAGWAIAGVVVLGFAGLELHQHRR
Mflv_2606|M.gilvum_PYR-GCK          AVT---------KLVAGQVATQSVSDMQGWDS------------------
MLBr_00397|M.leprae_Br4923          VIMAGSVDLSVGSIVALTGVTAALVAAQNQFAAIVTALLVGLAAGMVNGI
TH_1081|M.thermoresistible__bu      VLQEFVHFILPKILDGYGGSNAQQPIRL----------------------
MAB_2624c|M.abscessus_ATCC_199      RLLADNLDVTNGPRGLHKVAYPHVGEQHVHGGG-----------------
                                     :                                                

MSMEG_6018|M.smegmatis_MC2_155      KKALQLTHSPLGVVVARAIAVAVVVLGVTFVLSVNRSVNPRVEIRGIPYV
Mvan_5291|M.vanbaalenii_PYR-1       KIALRLSHSPLGVVVARVGAVAAVVLGVTYVMSVNRSVSAVADIRGIPYV
Mflv_2606|M.gilvum_PYR-GCK          --------------AQKVFASSFTLFG-----------------VGIRIT
MLBr_00397|M.leprae_Br4923          VFAYGKIPSFVSTLGMLQVCRGITLMISDSSAKPMPFHGILGAMGAMPWI
TH_1081|M.thermoresistible__bu      ------------VTPETQFTLGDVRVS-----------------NVTLII
MAB_2624c|M.abscessus_ATCC_199      -------------VFSSANSGGHLNYG-----------------VWWYWL
                                                         .                            

MSMEG_6018|M.smegmatis_MC2_155      LPLILLLLIGMTVLLRRTAYGRHIYAVGGNAEAARRAGISVDRIRVTAFI
Mvan_5291|M.vanbaalenii_PYR-1       LPLMLVLLIAMTVVLRRTSYGRHIYAVGGNAEAARRAGISVDRIRVSVFV
Mflv_2606|M.gilvum_PYR-GCK          VVWWLVFTAVATWVLFKTKVGNWIFAVGGDADSARAVGVPVTKVKIGLFM
MLBr_00397|M.leprae_Br4923          LIVCLFVTILAGILFQFTMFGRWVKAIGGNERVATLAGVPTRGIKVAIFA
TH_1081|M.thermoresistible__bu      VFAALVLALITDVVINRTRLGRGIRAVAQDPDTATLMGVSRERVILTTFV
MAB_2624c|M.abscessus_ATCC_199      GLCLIAAVLVLMGNLERSRVGRSWVAIREDEDAAEMMGVPTFRFKLWAFV
                                        :         :  :  *.   *:  :   *   *:.   . :  * 

MSMEG_6018|M.smegmatis_MC2_155      ACSSLAALSGIIAASYAGKVSASSGAGNTLLYAVGAAVIGGTSLFGGKGR
Mvan_5291|M.vanbaalenii_PYR-1       VCSSLAALSGIIAASYAGKVSASSGAGNTLLYAVGAAVIGGTSLFGGKGR
Mflv_2606|M.gilvum_PYR-GCK          FVGFCAWFVGMHLLFAFNTVQSGQGIGNEFFYII-AAVIGGCLLTGGYGT
MLBr_00397|M.leprae_Br4923          ICGLTAGLGGIVLASRLGAGTPTAATG-FEIDVIAAVVIGGTPLTGGLGR
TH_1081|M.thermoresistible__bu      IGGLLAGAAALLYTLKMPQAIIYSGGFLLGIKAFTAAVLG------GIGN
MAB_2624c|M.abscessus_ATCC_199      IGASIGGLSGALYAGQVQYVASPTFNIINSMLFLCAVVLG------GQGN
                                      .  .   .                    :  . *.*:*      * * 

MSMEG_6018|M.smegmatis_MC2_155      ALDAVIGGVVVATIANG-------LGLLNQSSYINFLVTGGVLLLAAGVD
Mvan_5291|M.vanbaalenii_PYR-1       AIDAVIGGVVVATIANG-------LGLLNQSSYINFLVTGGVLLLAASVD
Mflv_2606|M.gilvum_PYR-GCK          AIGAAIGALIFGMTNQG-------IVYAGWDPDWFKFFLGAMLLFAVIAN
MLBr_00397|M.leprae_Br4923          LSGTLIGAIIISMLSNG-------MVFMGVGNAASQIIKGIMLAAAVFVF
TH_1081|M.thermoresistible__bu      LRGALLGGLLLGVMENYGQ-----AVFGTQWRDVVAFVLLVLVLFFRPTG
MAB_2624c|M.abscessus_ATCC_199      KLGVVVGAFIIVYLPNRLLGVQVQGIDLGNLKYLFFGLALVVLMLFRPQG
                                      .. :*..:.    :                     .   ::       

MSMEG_6018|M.smegmatis_MC2_155      AISRRRRSATGL-------------------
Mvan_5291|M.vanbaalenii_PYR-1       AISRRRRSSTGLG------------------
Mflv_2606|M.gilvum_PYR-GCK          NAFRSYAARK---------------------
MLBr_00397|M.leprae_Br4923          LQRRKIGIIK---------------------
TH_1081|M.thermoresistible__bu      ILGESLGKARV--------------------
MAB_2624c|M.abscessus_ATCC_199      LFPAHQKLMAYWRKTSERLSAQKPDEVEAGA