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M. smegmatis MC2 155 MSMEG_5812 (-)

annotation: short chain dehydrogenase
coordinates: 5877928 - 5878758
length: 276

MVSLDGKVAFITGAARGQGRSHAVRLASEGADIIGVDICADIASAGYPMAGREELDETVALVEAHGGKMM
SAVADVRDYGALKTALDAGVDHFGRLDIVCANAGIAAMAFRELTIEEDLQMWADVVDVNLVGSFHTAKAA
IPHLIAGERGGSIVFTSSTAGLRGFGGMQGGGLGYAASKHGIVGLMRTLANALAPHRIRVNTVHPTAVNT
MMAVNPAMTAFLENYPDGGPHLQNPMPVELLEPEDISAAIAYLVSDAAEYVTGVTFPVDAGFCNKL
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_5812--100% (276)short chain dehydrogenase
M. smegmatis MC2 155MSMEG_2687-1e-7555.64% (275) 3-ketoacyl-(acyl-carrier-protein) reductase
M. smegmatis MC2 155MSMEG_4849-4e-6448.24% (284) carveol dehydrogenase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2771-1e-7756.78% (273) 3-ketoacyl-(acyl-carrier-protein) reductase
M. gilvum PYR-GCKMflv_1904-1e-13484.06% (276) short chain dehydrogenase
M. tuberculosis H37RvRv2750-1e-7756.78% (273) 3-ketoacyl-(acyl-carrier-protein) reductase
M. leprae Br4923MLBr_01807fabG16e-2134.52% (197) 3-oxoacyl-
M. abscessus ATCC 19977MAB_3081-3e-7655.43% (276) Short-chain dehydrogenase/reductase
M. marinum MMMAR_1965fabG3e-7452.73% (275) short chain dehydrogenase
M. avium 104MAV_3550-1e-12278.47% (274) short chain dehydrogenase
M. thermoresistible (build 8)TH_3053-2e-7956.16% (276) PUTATIVE carveol dehydrogenase
M. ulcerans Agy99MUL_3392fabG4e-7352.00% (275) 3-ketoacyl-(acyl-carrier-protein) reductase
M. vanbaalenii PYR-1Mvan_3394-1e-13786.23% (276) short chain dehydrogenase

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_5812|M.smegmatis_MC2_155      -----MVS---------LDGKVAFITGAARGQGRSHAVR---LASEGADI
Mvan_3394|M.vanbaalenii_PYR-1       -----MGS---------LDGRVAFITGVARGQGRSHAVR---LAADGADI
Mflv_1904|M.gilvum_PYR-GCK          -----MGS---------LDGRVAFITGVARGQGRSHAIR---LASEGAEI
MAV_3550|M.avium_104                -----MGS---------LDGKVAFITGAARGQGRSHAVR---LAREGANI
Mb2771|M.bovis_AF2122/97            ---MIDRP---------LEGKVAFITGAARGLGRAHAVR---LAADGANI
Rv2750|M.tuberculosis_H37Rv         ---MIDRP---------LEGKVAFITGAARGLGRAHAVR---LAADGANI
MMAR_1965|M.marinum_M               MSRPLDGP---------LSGRVAFITGAARGQGRAHALR---LARDGADV
MUL_3392|M.ulcerans_Agy99           MSRPLDGP---------LSGRVAFITGAARGQGRAHALR---LARDGADV
TH_3053|M.thermoresistible__bu      VADRQPGPDLPPGRSDSLRGRVAFITGAARGQGRAHAVR---LASEGADV
MAB_3081|M.abscessus_ATCC_1997      -----MGK---------LDGKVAFITGAARGQGRAHAIK---LASEGASI
MLBr_01807|M.leprae_Br4923          ------------------MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRG
                                                         .*  ...* * *:.  :    *.  *   

MSMEG_5812|M.smegmatis_MC2_155      IGVDICADIASAGYPMAGREELDETVALVEAHGGKMMSAVADVRDYGALK
Mvan_3394|M.vanbaalenii_PYR-1       IGVDICSDIASNGYPMATPAELEETVALVEAQGAKMLGSVADVRDFSAVK
Mflv_1904|M.gilvum_PYR-GCK          IGVDICADIEANRYPLASRAELDETVALVESAGGKMLGSVADVRDFGALK
MAV_3550|M.avium_104                IGIDICADIAANGYPMASRAELDQTVALVEEAGGKMLGTVADVRDFGQVK
Mb2771|M.bovis_AF2122/97            IAVDICEQIASVPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLS
Rv2750|M.tuberculosis_H37Rv         IAVDICEQIASVPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLS
MMAR_1965|M.marinum_M               IAVDLCDQIASVPYPLGTAEELATTVKLVEDTGARIVASQADVRDREALA
MUL_3392|M.ulcerans_Agy99           IAVDLCDQIASVPYPLGTAEELATTVKLVEDTGARIVASQADVRDREALA
TH_3053|M.thermoresistible__bu      IAVDLCDQIASVPYPLAGADDLAETARMVEEAGGRIVARQADVRDRDGLQ
MAB_3081|M.abscessus_ATCC_1997      IAVDICAQIPSVEYPMATTEDLDLTVKEVDALGRAISAHETDVRDREALQ
MLBr_01807|M.leprae_Br4923          IGLAVARRLVADGHRVAVT-------HRASVVPDWFFGVECDVTDNDAIG
                                    *.: :.  : :  : :.           ..     : .   ** *   : 

MSMEG_5812|M.smegmatis_MC2_155      TALDAGVDHFGRLDIVCANAGIAAMAFRELTIEEDLQMWADVVDVNLVGS
Mvan_3394|M.vanbaalenii_PYR-1       GALDAGVEHFGRLDIVCANAGIATMSFRELTDAEDLEMWTDVLDVNLVGT
Mflv_1904|M.gilvum_PYR-GCK          SAVDAGVEHFGRLDIVCANAGIAPTAFREVSIEEDLEMWTAAIDVNLVGS
MAV_3550|M.avium_104                AALDAGVEQFGRLDIVLANAGIAPLAFRQLSIEEELAQWRAVTGVNLDGA
Mb2771|M.bovis_AF2122/97            VALQAGLDEFGRLDIVVANAGIAMMQ-------AGDDGWRDVIDVNLTGV
Rv2750|M.tuberculosis_H37Rv         VALQAGLDEFGRLDIVVANAGIAMMQ-------AGDDGWRDVIDVNLTGV
MMAR_1965|M.marinum_M               AALQAGIDELGQVDIVVANAGIAPMQ-------SGDDGWRDVIDVNLSGA
MUL_3392|M.ulcerans_Agy99           AALQAGIDELGQVDIVVANAGIAPMQ-------SGDDGWRDVIDVNLSGA
TH_3053|M.thermoresistible__bu      QALQAGLDELGRLDIVIANAGIAPLQ-------SGPDGWRDVIDVNLTGV
MAB_3081|M.abscessus_ATCC_1997      AAFDAGVHDLGPVDIVVANAGIATLTP-----ECGDDGWRDVLDVNLTGV
MLBr_01807|M.leprae_Br4923          AAFKAVEEHQGPVEVLVANAGITSDMLIMR---MSEEQFQKVIDVNLTGV
                                     *..*  .. * :::: *****:               :  . .*** * 

MSMEG_5812|M.smegmatis_MC2_155      FHTAKAAIPHLIAGERGGSIVFTSSTAGLRGFGGMQGGGLGYAASKHGIV
Mvan_3394|M.vanbaalenii_PYR-1       FHTAKAAIPHLIAGGRGGSMVFTSSTAGLRGFGGMQGGGLGYAASKHGIV
Mflv_1904|M.gilvum_PYR-GCK          YHTAKAAIPHLIAGGQGGAIVFTSSTAGLKGFGGSQGGGLGYAASKHGIV
MAV_3550|M.avium_104                YHTAWAAIPHLLAGNRGGVIIFTSSTAGIKGFGGLQGGGLGYAASKHGIV
Mb2771|M.bovis_AF2122/97            FHTVQVAIPTLIEQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVV
Rv2750|M.tuberculosis_H37Rv         FHTVQVAIPTLIEQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVV
MMAR_1965|M.marinum_M               YYTVEVAIPTMIEQGRGGSIVLISSAAGLVGISSADAGAIGYAASKHALV
MUL_3392|M.ulcerans_Agy99           YYTVEVAIPTMIEQGRGGSIVLISSAAGLVGISSADAGAIGYVASKHALV
TH_3053|M.thermoresistible__bu      HHTVEVAVPTLVEQGDGGSIVLISSVAGLVGMGGAKPGALGYTAAKHGIV
MAB_3081|M.abscessus_ATCC_1997      YHTIEVARPSMVQRGAGGSIVLTSSVAGLTGMVMDNPGGLAYTAAKHGLV
MLBr_01807|M.leprae_Br4923          FRVAKLASRNMIKQRFG-RYIFMGSVVGLSGVP----GQANYAASKSGLI
                                    . .   *   ::    *   :: .*..*: *.     *   *.*:* .::

MSMEG_5812|M.smegmatis_MC2_155      GLMRTLANALAPHRIRVNTVHPTAVNTMMAVNPAMTAFLE---NYPDGGP
Mvan_3394|M.vanbaalenii_PYR-1       GLMRALANALAPHNIRVNTVHPTAVNTMMAVNPAMTEFLE---HYPDGGP
Mflv_1904|M.gilvum_PYR-GCK          GLMRTLANALAPHSIRVNSVHPTAVNTMMATNPAMTAFLE---AYPDGGP
MAV_3550|M.avium_104                GLMRTLANALAPLNIRVNTVHPTAVNTMMATNDDMTEFLQ---KNPGAGP
Mb2771|M.bovis_AF2122/97            GLMRAYANHLAPQNIRVNSVHPCGVDTPMINNEFFQQWLT--TADMDAPH
Rv2750|M.tuberculosis_H37Rv         GLMRAYANHLAPQNIRVNSVHPCGVDTPMINNEFFQQWLT--TADMDAPH
MMAR_1965|M.marinum_M               GLMRVYANLLAPHSIRVNSLHPSGVDTPMINNEFIRRWLADLVAETGSGP
MUL_3392|M.ulcerans_Agy99           GLMRVYANLLAPHSIRVNSLHPSGVDPPMINNEFIRHWLADLVAETGSGP
TH_3053|M.thermoresistible__bu      GLMRQYANLLAPHHIRVNSVHPTGVDTPMIDNEFTRQFLQQVLAEAQRPM
MAB_3081|M.abscessus_ATCC_1997      GLMRSYANMLAPHNIRVNTIHPSGVATPMLINPVTEKLFADGSPEGMS--
MLBr_01807|M.leprae_Br4923          GMARSLARELGSRSITANVVAPGFIDTEMTR-----------AMDSKYQE
                                    *: *  *. *..  * .* : *  : . *                     

MSMEG_5812|M.smegmatis_MC2_155      HLQNPMPVELL-EPEDISAAIAYLVSDAAEYVTGVTFPVDAGFCNKL
Mvan_3394|M.vanbaalenii_PYR-1       HLQNPMPVDLL-EPEDISAAVAYLVSDAARYVTGVTFPVDAGFCNKL
Mflv_1904|M.gilvum_PYR-GCK          HLQNAMPVSLL-EPEDISAAISYLVSDAAKYVTGVTFPVDAGFCNKL
MAV_3550|M.avium_104                HLQNPMPVGML-EPEDVSAAIAYLVSDEARYVTGVTFPVDAGFCNKV
Mb2771|M.bovis_AF2122/97            NLGNALPVELV-QPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR
Rv2750|M.tuberculosis_H37Rv         NLGNALPVELV-QPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR
MMAR_1965|M.marinum_M               GAGNALPVQIL-QADDIAGALAWLVSDEARYITGVALPVDAGCVNKR
MUL_3392|M.ulcerans_Agy99           GAGNALPVQIL-QADDIAGALAWLVSDEARYITGVALPVDAGCVNKR
TH_3053|M.thermoresistible__bu      DMGNALPVQAI-EPEDVANAVAWLVSDAARYVTGVALPVDAGSVNKR
MAB_3081|M.abscessus_ATCC_1997      DTGNALPVVLM-EPEDMANTVAWLVSEDARYITGVALPVDAGFTNRR
MLBr_01807|M.leprae_Br4923          AALQAIPLGRIGAVEEIAGAVSFLASEDAGYISGAVIPVDGGLGMGH
                                       :.:*:  :    ::: ::::*.*: * *::*..:***.*