For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTSVGFVGLGIMGRPMALNLAWSGTPLVVWNRTLERCLPVEAAGARVASHVGEVFDRCETVILMLADESA IDDVLGCQTSAFDGLVRRHTIVQMGTVDPGYSRRLADRVAGAGGCYVEAPVSGSRGPAEAGELVAMLAGA PEDCTHVRAIIAPMCRAVFDCGTPPHALLTKFAVNLFMIAMVTGLAEAYHFAEGHGVDPALLDRILDASP MASTVSRAKSAKLARRDFEVQAGLADVHKNTDLITRAARSRGIASPVLDACHALYGEAVALGHPTEDMAA VIHAVRARTAAA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5463 | - | - | 100% (292) | 6-phosphogluconate dehydrogenase, NAD-binding |
M. smegmatis MC2 155 | MSMEG_5477 | - | 7e-29 | 27.40% (292) | 2-hydroxy-3-oxopropionate reductase |
M. smegmatis MC2 155 | MSMEG_2170 | - | 3e-24 | 30.18% (285) | 3-hydroxyisobutyrate dehydrogenase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0773c | mmsB | 3e-16 | 25.17% (302) | 3-hydroxyisobutyrate dehydrogenase MmsB |
M. gilvum PYR-GCK | Mflv_5012 | - | 9e-17 | 24.57% (293) | 3-hydroxyisobutyrate dehydrogenase |
M. tuberculosis H37Rv | Rv0751c | mmsB | 3e-16 | 25.17% (302) | 3-hydroxyisobutyrate dehydrogenase MmsB |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1043c | - | 1e-22 | 29.63% (297) | putative oxidoreductase |
M. marinum M | MMAR_1077 | mmsB | 4e-16 | 24.49% (294) | 3-hydroxyisobutyrate dehydrogenase, MmsB |
M. avium 104 | MAV_0931 | - | 1e-21 | 28.72% (282) | 3-hydroxyisobutyrate dehydrogenase |
M. thermoresistible (build 8) | TH_2512 | - | 6e-16 | 25.71% (210) | PUTATIVE 6-phosphogluconate dehydrogenase, NAD-binding |
M. ulcerans Agy99 | MUL_0835 | mmsB | 2e-16 | 24.49% (294) | 3-hydroxyisobutyrate dehydrogenase, MmsB |
M. vanbaalenii PYR-1 | Mvan_5187 | - | 2e-18 | 29.62% (260) | 6-phosphogluconate dehydrogenase, NAD-binding |
CLUSTAL 2.0.9 multiple sequence alignment Mb0773c|M.bovis_AF2122/97 MTT---IAFLGLGNMGAPMSANLVGAGHVVRGFDPAPTAASGAAAHGVAV Rv0751c|M.tuberculosis_H37Rv MTT---IAFLGLGNMGAPMSANLVGAGHVVRGFDPAPTAASGAAAHGVAV MMAR_1077|M.marinum_M MTKSCQIAFLGLGHMGAPMSANLIGAGHTVRGFDPVPAAASAAAAKGATM MUL_0835|M.ulcerans_Agy99 MTKSCQIAFLGLGHMGAPMSANLIGAGHTVRGFDPVPAAASATAAKGATM Mflv_5012|M.gilvum_PYR-GCK MTT---IAFLGLGNMGGPMAANLVAAGHTVHAFDVVPELRDAAEAKGANV MAB_1043c|M.abscessus_ATCC_199 MST---IAVIGLGAMGKAMADNLVQAGHQVSVWNRSPAPVAELAAVGARP Mvan_5187|M.vanbaalenii_PYR-1 -MK---IGFIGLGNMGSAMAANLLSAGHEVLAYNRSRDRVVALAERGATP MAV_0931|M.avium_104 MT----IGFIGLGNMGFPMASRLIREQHDVVAFDSRREALERLVAAGARP MSMEG_5463|M.smegmatis_MC2_155 MTS---VGFVGLGIMGRPMALNLAWSGTPLVVWNRTLERCLPVEAAGARV TH_2512|M.thermoresistible__bu MR----VGFIGLGSQGGPMARRIAENGYETTLWARRAATLEPFADTPAKT :..:*** * .*: .: : . Mb0773c|M.bovis_AF2122/97 FRSAPEAVAEADVVITMLPTGEVVRRCY---TDVLAAARPATLFIDSSTI Rv0751c|M.tuberculosis_H37Rv FRSAPEAVAEADVVITMLPTGEVVRRCY---TDVLAAARPATLFIDSSTI MMAR_1077|M.marinum_M FDSAAEAVAGADVVITMLPNGAVVKRCY---AEVLPAARSGALFIDSSTI MUL_0835|M.ulcerans_Agy99 FDSAAEAVARADVVITMLPNGAVVKRCY---AEVLPAARSGALFIDSSTI Mflv_5012|M.gilvum_PYR-GCK FDSAAAAVADADVVVTSLPNGAVVKAVY---DEVVPAAKAGALLIDTSTI MAB_1043c|M.abscessus_ATCC_199 LDSVAQAFDSGVVFSVLADDHAVTETLL---TPEVLAAGHGALHVNLATV Mvan_5187|M.vanbaalenii_PYR-1 VPTVAAACEGDVVFTMLADDTAVESVTFGD-TGIVAALAPGAIHVSASTI MAV_0931|M.avium_104 ASSPKEVADGAETVLASLPTPGASLEVATG-TAGVIEGARVKRYVDLSTV MSMEG_5463|M.smegmatis_MC2_155 ASHVGEVFDRCETVILMLADESAIDDVLGCQTSAFDGLVRRHTIVQMGTV TH_2512|M.thermoresistible__bu AGSPAELGAASDLVCLCVVGDDDVREVLYGDTGVLAGLAPGGVVAIHSTV . . .*: Mb0773c|M.bovis_AF2122/97 SVTDAREVHALAESHGMLQLDAPVSGGVKGAAAATLAFMVGGDESTLRRA Rv0751c|M.tuberculosis_H37Rv SVTDAREVHALAESHGMLQLDAPVSGGVKGAAAATLAFMVGGDESTLRRA MMAR_1077|M.marinum_M SVNDAREVHALAESHGMAQLDAPVSGGVKGAVAGTLAFMVGGDQSALAQA MUL_0835|M.ulcerans_Agy99 SVNDAREVHALAESHGMAQLDAPVSGGVKGAVAGTLAFMVGGDQSALAQA Mflv_5012|M.gilvum_PYR-GCK SVDDARAIHEQATAGGLAQIDAPVSGGIKGATAGTLAFMVGGDDEAFERA MAB_1043c|M.abscessus_ATCC_199 SARLADRATALHDEHGVGYVAAPVFGRVPVAQAGQLQVLAAGAAAQIDKA Mvan_5187|M.vanbaalenii_PYR-1 SVALSEKLTAAHAEAGQMFVSAPVFGRPEAAAAAKLFVVAAGPHDAVTSL MAV_0931|M.avium_104 GSRTAMRIHDLLARRNIVAIDSPVSGGVGGAEQGTLALMVSGPRGEFDVI MSMEG_5463|M.smegmatis_MC2_155 DPGYSRRLADRVAGAGGCYVEAPVSGSRGPAEAGELVAMLAGAPEDCTHV TH_2512|M.thermoresistible__bu HPDTCREISEKAAAQQVSVIDAPVSGGGPAVEEGKLLVMVGGDEEVVERC . : :** * . . * : .* Mb0773c|M.bovis_AF2122/97 RPVLEPMAGKIIHCG-AAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKLG Rv0751c|M.tuberculosis_H37Rv RPVLEPMAGKIIHCG-AAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKLG MMAR_1077|M.marinum_M RPVLEPMAGKIIHCG-AAGAGQAAKVCNNMVLAVQQIAIGEAFVLAENLG MUL_0835|M.ulcerans_Agy99 RPVLEPMAGKIIHCG-AAGAGQAAKVCNNMVLAVQQIAIGEAFVLAENLG Mflv_5012|M.gilvum_PYR-GCK KPVLEPMAGKIIHCG-ASGAGQAAKLCNNMVLAVQQIAIGEAFVLAEKLG MAB_1043c|M.abscessus_ATCC_199 QSFFDVIGARTWRLGDAPRQANVVKIIGNFLIASAIQSLSEAVSMAERSG Mvan_5187|M.vanbaalenii_PYR-1 QPAFEAIGQRTYVMSEEPKTANLVKLSGNFLIASVIESLGEAMALVSKAG MAV_0931|M.avium_104 RTTLEALG-RPFYVGDKPGAAQTMKLANNILAANVLAATAEVVVMGVKAG MSMEG_5463|M.smegmatis_MC2_155 RAIIAPMCRAVFDCG-TPPHALLTKFAVNLFMIAMVTGLAEAYHFAEGHG TH_2512|M.thermoresistible__bu RPVFASYADPIVHLG-PLGSGQVTKILNNLLFTANLGSALSTLELGESLG :. : . . *. *:. . .. : * Mb0773c|M.bovis_AF2122/97 LSAQSLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNK Rv0751c|M.tuberculosis_H37Rv LSAQSLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNK MMAR_1077|M.marinum_M LDAQSLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFATALMNK MUL_0835|M.ulcerans_Agy99 LDAQSLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFATALMNK Mflv_5012|M.gilvum_PYR-GCK LPAQSLFDVITGATGNCWSVHTNCPVPGPVPTSPANNDFKPGFATALMNK MAB_1043c|M.abscessus_ATCC_199 VDSALLVELLTSTLFQGPAYSSYGKLIATSAYEPAG------FTTTLGRK Mvan_5187|M.vanbaalenii_PYR-1 VDRQTYLELLTSTLFAAPAYQTYGGLLARKQFEPAG------FAAHLGLK MAV_0931|M.avium_104 LDPAVMIEVLNAGSGATSASRDKFPRAILPRSFDYG------FATGLMVK MSMEG_5463|M.smegmatis_MC2_155 VDPALLDRILDASPMASTVSRAKSAKLARRDFEVQAG-------LADVHK TH_2512|M.thermoresistible__bu IPRVKLAEVLNGGSATSKALGSISVFGGTVEGLAPIAG-------ALLQK : :: . * Mb0773c|M.bovis_AF2122/97 DLGLAMDAVAATGATAPLGSHAADIYAKFAAD-HADLDFSAVIHTLRARA Rv0751c|M.tuberculosis_H37Rv DLGLAMDAVAATGATAPLGSHAADIYAKFAAD-HADLDFSAVIHTLRARA MMAR_1077|M.marinum_M DLGLAMDAVTSTGSAAPLGSHAAEIYAKFAAD-HADQDFSAVIEMLRGS- MUL_0835|M.ulcerans_Agy99 DLGLAMDAVTSTASAAPLGSHAAEIYAKFATD-HADQDFSAVIEMLRGS- Mflv_5012|M.gilvum_PYR-GCK DLGLAMAAVESSGAKAPLGTHAAEIYSDFAKE-HAGKDFSAIIEALRD-- MAB_1043c|M.abscessus_ATCC_199 DVGLALEVAADTGLRLPFGEILRTVFDEALAGGHANLDWSSIADLQRARD Mvan_5187|M.vanbaalenii_PYR-1 DVRLVLAAGEQLEVPLPVASLIRDRFLTLLAGGGRDLDWSALGALADWEA MAV_0931|M.avium_104 DVRLYLDEAKALGVPAEVAETIARLWETAAREEGPEADFTTVIKPLERAA MSMEG_5463|M.smegmatis_MC2_155 NTDLITRAARSRGIASPVLDACHALYGEAVALGHPTEDMAAVIHAVRART TH_2512|M.thermoresistible__bu DVRHAANIAASASVPEGTVFTVADTALTAMGHARR--------------- : Mb0773c|M.bovis_AF2122/97 DA------- Rv0751c|M.tuberculosis_H37Rv DA------- MMAR_1077|M.marinum_M --------- MUL_0835|M.ulcerans_Agy99 --------- Mflv_5012|M.gilvum_PYR-GCK --------- MAB_1043c|M.abscessus_ATCC_199 AE------- Mvan_5187|M.vanbaalenii_PYR-1 GGPRPGSG- MAV_0931|M.avium_104 GVTVGRSAR MSMEG_5463|M.smegmatis_MC2_155 AAA------ TH_2512|M.thermoresistible__bu ---------