For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_4519 (-)

annotation: NrtC protein
coordinates: 4606739 - 4607761
length: 340

MTAMLADSALDRVARTVAARAAELDEQRTDVRTDLAELGREGLLDLDLPGMVRVIDEVSAHSLAVGFSTW
AHHMSLRYLNASSTGGFDEQISALAAARKIGVTAMAAGLKQIAGLGQVPVTGDNDGSDLIVSGPIRWATN
VFPDALMVLPVRVGEHTVVVAVGTGDDGVTVDPAPPLTALGATASTSLHLNEVRVAADQVLATDLAAFVA
RIRPAFLLLQTAFCVGITRAALTAATEAHTGPLARFGAELDDAATRAADIRARLYGWASDPGTATVPDLI
RLRLDAAHAAVDVTRLELSLTGGVGYTLGSAANRRFREAAFLPVQSPSEGQLRWELTRYE
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_4519--100% (340)NrtC protein
M. smegmatis MC2 155MSMEG_0108-5e-0925.42% (358) acyl-CoA dehydrogenase
M. smegmatis MC2 155MSMEG_3982-5e-0622.03% (345) acyl-CoA dehydrogenase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3302cfadE251e-0622.71% (339) acyl-CoA dehydrogenase FADE25
M. gilvum PYR-GCKMflv_4943-3e-0625.93% (324) acyl-CoA dehydrogenase domain-containing protein
M. tuberculosis H37RvRv3274cfadE251e-0622.71% (339) acyl-CoA dehydrogenase FADE25
M. leprae Br4923MLBr_00737fadE259e-0621.83% (339) putative acyl-CoA dehydrogenase
M. abscessus ATCC 19977MAB_2460-1e-9555.00% (340) hypothetical protein MAB_2460
M. marinum MMMAR_2998-1e-5438.62% (334) hypothetical protein MMAR_2998
M. avium 104MAV_2487-6e-5537.97% (345) NtrC protein
M. thermoresistible (build 8)TH_3846-5e-0621.47% (340) PUTATIVE acyl-CoA dehydrogenase
M. ulcerans Agy99MUL_2239-2e-5036.76% (340) hypothetical protein MUL_2239
M. vanbaalenii PYR-1Mvan_1476-3e-0726.18% (359) acyl-CoA dehydrogenase domain-containing protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb3302c|M.bovis_AF2122/97           MVGWAGNPSFDLFKLPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEE
Rv3274c|M.tuberculosis_H37Rv        MVGWAGNPSFDLFKLPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEE
MLBr_00737|M.leprae_Br4923          MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFPEE
TH_3846|M.thermoresistible__bu      MAAWSGNPSFELFQLPEEHIALREAIRALAEKEIAPYAAEVDEKARFPEE
Mflv_4943|M.gilvum_PYR-GCK          -------MPVDRLLPTDDARDLVELARQIADKVLDPIVDRHEKDETYPEG
Mvan_1476|M.vanbaalenii_PYR-1       -------MAVDRLLPTDEARELVDLARQIADKALDPIVDQHEKDETYPDG
MSMEG_4519|M.smegmatis_MC2_155      -------------MTAMLADSALDR----VARTVAARAAELDEQRTDVRT
MAB_2460|M.abscessus_ATCC_1997      --------------MAREIDDELER----VVDEVARRAAALDADQTDVRV
MMAR_2998|M.marinum_M               --------------MTATVDAATDLLHSELLAEIRAHASALDRGDGTARR
MUL_2239|M.ulcerans_Agy99           --------------MTATVDAATDLLHSELLAEIRAHASALDRGDGTARR
MAV_2487|M.avium_104                --------------MTATVDGATGLLDAALVEDIRAHAAVLDRGQDSARR
                                                   .                 :   .   :        

Mb3302c|M.bovis_AF2122/97           ALVALNSSGFNAVHIPEEYGGQGADSVATCIV--IEEVARVDASASLIPA
Rv3274c|M.tuberculosis_H37Rv        ALVALNSSGFNAVHIPEEYGGQGADSVATCIV--IEEVARVDASASLIPA
MLBr_00737|M.leprae_Br4923          ALAALNASGFNAIHVPEEYGGQGADSVAACIV--IEEVARVDASASLIPA
TH_3846|M.thermoresistible__bu      ALAALNSSGFSAIHVPEEYGGQGADSVATCIV--IEEVARVDCSASLIPA
Mflv_4943|M.gilvum_PYR-GCK          VFATLGEAGLLSLPYPEEWGGGGQPYEVYLQV--LEELAARWAAVAVAVS
Mvan_1476|M.vanbaalenii_PYR-1       VFATLGEAGLLSLPYPEEWGGGGQPYEVYLQV--LEELAARWAAVAVAVS
MSMEG_4519|M.smegmatis_MC2_155      DLAELGREGLLDL--------DLPGMVRVID-----EVSAHSLAVGFSTW
MAB_2460|M.abscessus_ATCC_1997      DIAALGAQGLFHAGGVGT---DLAPMVRTIE-----RVATGSLAVGFSAW
MMAR_2998|M.marinum_M               SFPGLGAVGLLGLGAPGNSDGCLPQMAEVIS-----VISGECMSTGFSVW
MUL_2239|M.ulcerans_Agy99           SFPGLGAVGLLGLGAPGNSDGCLPQMAEAISVISISVISGECMSTGFSVW
MAV_2487|M.avium_104                SFTALGEAGVLGIGAPGNRDGRLPVMAEVIR-----SISGICMSTGFSLW
                                     :  *.  *.                           ::    :...   

Mb3302c|M.bovis_AF2122/97           VNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRT
Rv3274c|M.tuberculosis_H37Rv        VNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRT
MLBr_00737|M.leprae_Br4923          VNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRT
TH_3846|M.thermoresistible__bu      VNKLGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRT
Mflv_4943|M.gilvum_PYR-GCK          VHSLSCHPLMSFGSDEQRQRWLPDMLGGSTIGAYSLSEPQAGSDAAALTC
Mvan_1476|M.vanbaalenii_PYR-1       VHSLSCHPLMSFGTDEQRQRWLPEMLGGSTIGAYSLSEPQAGSDAAALTC
MSMEG_4519|M.smegmatis_MC2_155      AHHMSLRYLNASSTGGFDEQISALAAARKIGVTAMAAGLKQIAGLGQVPV
MAB_2460|M.abscessus_ATCC_1997      AHRMAIEYVSLAAADFRAEHLAELTGGHRPGVTAMAAGLKQAAGLGEVPL
MMAR_2998|M.marinum_M               ASRMAVEYLLTAATEYSLAVVGPLLAGAALGISGMAAAFKEAAGCGDLEL
MUL_2239|M.ulcerans_Agy99           ASRMAVEYLLTAATEYSLAVVGPLLAGAALGISGMAAAFKEAAGCADLEL
MAV_2487|M.avium_104                AHRMTVEYLLTAATPFSAVAVRPLLRGSVLGVTGMAAAFKEAAGCGSMEL
                                    .  :    :   .:            .     :   :  :  :. . :  

Mb3302c|M.bovis_AF2122/97           RAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKD
Rv3274c|M.tuberculosis_H37Rv        RAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKD
MLBr_00737|M.leprae_Br4923          RAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAFIVHKD
TH_3846|M.thermoresistible__bu      RAVADGDDWILNGSKCWITNGGKSTWYTVMAVTDPDKGANGISAFMVHKD
Mflv_4943|M.gilvum_PYR-GCK          RATAVDGGYRITGSKAWITHGGIADFYNLFARTG--EGSQGISCFLVPRD
Mvan_1476|M.vanbaalenii_PYR-1       KAVAADGGYRINGAKAWITHGGIADFYNLFARTG--EGSQGISCFLVPRD
MSMEG_4519|M.smegmatis_MC2_155      TGDNDGSDLIVSGPIRWATN----VFPDALMVLPVR-VGEHTVVVAVGTG
MAB_2460|M.abscessus_ATCC_1997      RATNQGDGLSISGPIRWASN----VFPDALMVVPACGADGTTYVVAIEVC
MMAR_2998|M.marinum_M               TARPVTGGYQLSGSIRWASN----LYQDSVLVTAARTERGEKLIVALPLA
MUL_2239|M.ulcerans_Agy99           TARPVTGGYQLSGSIRWASN----LYQDSVLVTAARTERGEELIVALPLA
MAV_2487|M.avium_104                TATPVAGGYRVSGPIRWASN----LYPDSTMVTAVRTEAGERLIVAVPLD
                                     .    .   :.*   * ::     :                  . :   

Mb3302c|M.bovis_AF2122/97           DEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATL
Rv3274c|M.tuberculosis_H37Rv        DEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATL
MLBr_00737|M.leprae_Br4923          DEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIGEPGTGFKTALATL
TH_3846|M.thermoresistible__bu      DEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATL
Mflv_4943|M.gilvum_PYR-GCK          TEGLTFGKPEEKMGLHAVPTTAAHYDDANLDSDRRIGTEGQGLQIAFSAL
Mvan_1476|M.vanbaalenii_PYR-1       TEGLTFGKPEEKMGLHAVPTTAAHYENAFVEADRRIGAEGQGLQIAFSAL
MSMEG_4519|M.smegmatis_MC2_155      DDGVTVDPAPPLTALGATASTSLHLNEVRVAADQVLATDLAAFVARIR--
MAB_2460|M.abscessus_ATCC_1997      ANGVRIQRPPDLMALTATASTSLHLDDVRVPMEHVISTDLQGFVRRIR--
MMAR_2998|M.marinum_M               TPGVAVGDHFELLAMGSTASSQLELQDVYVASEQVLSTDCGGFLDAVR--
MUL_2239|M.ulcerans_Agy99           TPGVAVGDHFELLAMASTASSQLELQDVYVASEQVLSTDCGGFLDAVR--
MAV_2487|M.avium_104                TPGVILGEHFDLLALGSTASSYLNFDGAHIADEQVLSRDFDGFLQAVR--
                                      *. .       .: . .::    :   :  :: :.    .:   .   

Mb3302c|M.bovis_AF2122/97           DHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMA
Rv3274c|M.tuberculosis_H37Rv        DHTRPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMA
MLBr_00737|M.leprae_Br4923          DHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMA
TH_3846|M.thermoresistible__bu      DHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMA
Mflv_4943|M.gilvum_PYR-GCK          DSGRLGIAAVAVGLAQAALDEAVAYSQERTTFGRKIIDHQGLAFLLADMA
Mvan_1476|M.vanbaalenii_PYR-1       DSGRLGIAAVAVGLAQAALDAAVDYSQERTTFGRKIIDHQGLAFLLADMA
MSMEG_4519|M.smegmatis_MC2_155      PAFLLLQTAFCVGITRAALTAATEAHTG---------PLARFGAELDDAA
MAB_2460|M.abscessus_ATCC_1997      PAFLLLQTAFCSGVSVAALEGARAAHGI---------IAAQFSTELDDIT
MMAR_2998|M.marinum_M               PTFLVLQSAMCIGLARTALAQSRIALAG---------VNSVYVPDLDLIA
MUL_2239|M.ulcerans_Agy99           PTFLVLQSGMCIGLARTALAQSRIALAG---------VNSVYAPDFDLIA
MAV_2487|M.avium_104                PTFLVLQSAMCLGLSRTAVRQAGFGLGG---------VNAVFRADVEAIT
                                            . . *::  *:  :                       .   :

Mb3302c|M.bovis_AF2122/97           MKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEVTTDAVQLF
Rv3274c|M.tuberculosis_H37Rv        MKVEAARLMVYSAAARAERGEPDLGFISAASKCFASDVAMEVTTDAVQLF
MLBr_00737|M.leprae_Br4923          MKVEAARLIVYAAAARAERGEPDLGFISAASKCFASDIAMEVTTDAVQLF
TH_3846|M.thermoresistible__bu      MKIEAARLMVYSAAARAERGEGDLGFISAASKCFASDVAMEVTTDAVQLF
Mflv_4943|M.gilvum_PYR-GCK          AAVDSARATYLDAARRRDAGLP-YSRHASVAKLVATDAAMKVTTDAVQVL
Mvan_1476|M.vanbaalenii_PYR-1       AAVDAARATYLDAARRRDAGLP-YSRHASVAKLTATDAAMKVTTDAVQVF
MSMEG_4519|M.smegmatis_MC2_155      TRAADIRARLYGWASDPGTATVP---DLIRLRLDAAHAAVDVTRLELSLT
MAB_2460|M.abscessus_ATCC_1997      RRSHALRERLYTFAAVPSAPDIA---DLLRLRLDAAGLAGAASRLEVTLS
MMAR_2998|M.marinum_M               ERLALAESTLSGAAASVGTQRPAGRRELLSLRLSSAKIACASADLEIRVA
MUL_2239|M.ulcerans_Agy99           ERLALAESTLSGAAASVGTQRPAGRRELLSLRLSSAKIACASADREIRVA
MAV_2487|M.avium_104                EKLGAAEETLAKLAAAVGGPAAPSKKELLSLRLAAAELAAASADVEIRTA
                                          .      *                 :  ::  *   :   :   

Mb3302c|M.bovis_AF2122/97           GGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR-
Rv3274c|M.tuberculosis_H37Rv        GGAGYTTDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR-
MLBr_00737|M.leprae_Br4923          GGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR-
TH_3846|M.thermoresistible__bu      GGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR-
Mflv_4943|M.gilvum_PYR-GCK          GGAGYTRDYRVERYMREAKITQIFEGTNQIQRLVISRHLTRG
Mvan_1476|M.vanbaalenii_PYR-1       GGAGYTRDYRVERYMREAKITQIFEGTNQIQRLVISRHLARD
MSMEG_4519|M.smegmatis_MC2_155      GGVGYTLGSAANRRFREAAFLPVQSPSEGQLRWELTRYE---
MAB_2460|M.abscessus_ATCC_1997      GGAGYALGTPANRRFREAAFLPIQSPSEGQLRWELKQYE---
MMAR_2998|M.marinum_M               GGKGYASRTPTNRRYREAAFLPVQSPSEAQLRWELDRCR---
MUL_2239|M.ulcerans_Agy99           GGKGYASRTPTNRRYREAAFLPVQSPSEAQLRWELDRCR---
MAV_2487|M.avium_104                GGKGYASRTSASRRYREAAFIPVQSPSEAQLRWELAGCG---
                                    ** **:    ..*  *:* :  : . ::   *  :