For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_3991 (-)

annotation: cyclase
coordinates: 4063093 - 4063911
length: 272

VNASLLDALAAARPRIIDLAQPLQEGMPCSPTHPGFRMALSRRHGDVARPDGMTGSHEMLVLGGHVGTHM
DALAHVAVDGYFHGGTPVTVTDGRYASHGIDEVPPLVCRGVLVDVPKLRGVDRLPPGEPVTAADLRDADI
RHGDVVLIRTGWAQLWHNPDAYIGTDSGVPGLTTDGARHLVAAGARVVGADTLALEHIPPGAGFANLPVH
RILLQDSGMNIIEAMNLEALAHTGAREFVFVGAPLPVVGATGAPIRPLALVEEQHVGSGGQT
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_3991--100% (272)cyclase
M. smegmatis MC2 155MSMEG_4048-5e-2235.75% (207) cyclase
M. smegmatis MC2 155MSMEG_4861-1e-2034.25% (219) cyclase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1744-1e-1131.52% (184) hypothetical protein Mb1744
M. gilvum PYR-GCKMflv_2406-4e-2033.33% (219) hypothetical protein Mflv_2406
M. tuberculosis H37RvRv1716-1e-1131.52% (184) hypothetical protein Rv1716
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_3566c-1e-2033.80% (216) putative cyclase
M. marinum MMMAR_4772-2e-2034.39% (221) hypothetical protein MMAR_4772
M. avium 104MAV_0883-2e-1933.48% (221) putative cyclase superfamily protein
M. thermoresistible (build 8)TH_0900-3e-2134.23% (222) cyclase
M. ulcerans Agy99MUL_0343-1e-2034.39% (221) hypothetical protein MUL_0343
M. vanbaalenii PYR-1Mvan_4240-5e-2134.23% (222) hypothetical protein Mvan_4240

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2406|M.gilvum_PYR-GCK          ----MTGTMADFRKAADEVRNWGRWGDDDEVGTLNFITPEKVAEAARLVT
Mvan_4240|M.vanbaalenii_PYR-1       ----MTGTMKDFRRVADEVRNWGRWGDDDEVGTLNFITPAKVAEAAGLVK
TH_0900|M.thermoresistible__bu      VKPMSTASMTEFRRVADQVRNWGRWGTDDELGTLNFITAEKVTEAAGLVR
MMAR_4772|M.marinum_M               -----MADMTEFRRVARELSNWGRWGDADELGTLNFITAEKVQRAASLVR
MUL_0343|M.ulcerans_Agy99           ----MMADMTEFRRVARELSNWGRWGDADELGTLNFITAEKVQRAASLVR
MAV_0883|M.avium_104                -----MASVTDFRRAARDVSNWGRWGDDDELGTLNFITEEKIAQAASLVQ
MAB_3566c|M.abscessus_ATCC_199      ----MGDDLAVLESYIQRCSNWGRWGSQDQLGTVNLITQEKIREAATLVK
Mb1744|M.bovis_AF2122/97            ---------------------------------MTFAWPLGAAEST----
Rv1716|M.tuberculosis_H37Rv         ---------------------------------MTFAWPLGAAEST----
MSMEG_3991|M.smegmatis_MC2_155      ---------------------------------MNASLLDALAAAR----
                                                                     :.         :     

Mflv_2406|M.gilvum_PYR-GCK          QGKVISLGGDFSSGGPQGAFKFRQNPVHVMTVDGGDASTLVEYGPKWLRN
Mvan_4240|M.vanbaalenii_PYR-1       QGKVISLGGDFSSGGPQGAFKFRQNPVHVMTVDGGDASTLVEYGPQWLRN
TH_0900|M.thermoresistible__bu      QGKVFALGGDFGSAGPQGAFQFRQNPVHVMTVDGGDINTLAQYGPQWLRN
MMAR_4772|M.marinum_M               HGKVFALGVDFGSSGPQGAFGFRHNPIHLMTIDGGDASSLAQYGPGWEQN
MUL_0343|M.ulcerans_Agy99           HGKVFALGVDFGSSGPQGAFGFRHNPIHLMTIDGGDASSLAQYGPGWEQN
MAV_0883|M.avium_104                HGKVFPLGVDFGSSGPQGAFGFRHNPIHVMTVDGGDAATLAQYGPGWDRN
MAB_3566c|M.abscessus_ATCC_199      VGKTISLTMAYDADGPQNGYLGRANP-QLYQLTSGPGYLVGEQ--QQVET
Mb1744|M.bovis_AF2122/97            -LEFYDLSHPWGHGAPAWPYFEDVQIERLHGMAKSR--VLTQKITTVMHS
Rv1716|M.tuberculosis_H37Rv         -LEFYDLSHPWGHGAPAWPYFEDVQIERLHGMAKSR--VLTQKITTVMHS
MSMEG_3991|M.smegmatis_MC2_155      -PRIIDLAQPLQEGMPCSPTHP------------------------GFRM
                                      .   *        *                                . 

Mflv_2406|M.gilvum_PYR-GCK          AVAADMSAFFADNPFRFNDDIIVMPLQAATQWDAMSHVYYEDKLYNGFPA
Mvan_4240|M.vanbaalenii_PYR-1       AVAADMSAFFADNPFRFNDDIIVMPLQAATQWDAMSHVYYEDKLYNGFPA
TH_0900|M.thermoresistible__bu      SVAHQVSEFFVDNPFRFNDDMIVMPLQAATQWDALSHVYYDDQLYNGFPA
MMAR_4772|M.marinum_M               PTAREMGKYVVDNPFRFNDDMIIMPLQAATQWDALSHVYYDDQLYNGFPA
MUL_0343|M.ulcerans_Agy99           PTAREMGKYLVDNPFRFNDDMIIMPLQAATQWDALSHVYYDDQLYNGFPA
MAV_0883|M.avium_104                PTAAQMGPYFVDNLFRFNDDMIIMPLQAATQWDALSHVYYDDLLYNGVPA
MAB_3566c|M.abscessus_ATCC_199      QTLTELRKTSGEPTAGYYDDVLVMPTQSGTQWDALCHFFWRGKMYNGHRV
Mb1744|M.bovis_AF2122/97            GTHIDAPAHVVEGTP-FLDEIPLS-------------AFFGTGVVVSIPK
Rv1716|M.tuberculosis_H37Rv         GTHIDAPAHVVEGTP-FLDEIPLS-------------AFFGTGVVVSIPK
MSMEG_3991|M.smegmatis_MC2_155      ALSRRHGDVARPDGMTGSHEMLVLGGHVGTHMDALAHVAVDGYFHGGTP-
                                                      .:: :                    .  .   

Mflv_2406|M.gilvum_PYR-GCK          DSVTSFGAFHLGIEKVDRKGITSRGVLLDVVAHRGADVFCEPGEPITPDE
Mvan_4240|M.vanbaalenii_PYR-1       DSVTSFGAFHLGIEKVDNKGITSRGVLLDVVAHRGVDTFCQPGAPITPDE
TH_0900|M.thermoresistible__bu      GSVTSFGAFHCGIDKVDHKGITSRGVLLDVVRHRGAEVFLEPGQPVTPEE
MMAR_4772|M.marinum_M               DSVTSLGAYHCGIDKVDVKGITSRGVLLDLVRHRGAEVFLEHGNPITPEE
MUL_0343|M.ulcerans_Agy99           DSVTSLGAYHCGIDKVDVKGITSRGVLLDLVRHRGAEVFLEHGNPITPEE
MAV_0883|M.avium_104                GSVTSLGARRLGIEKVDGKGITSRGVLLDLVRHRGAAVFLEHGNPITPEE
MAB_3566c|M.abscessus_ATCC_199      ADAGTGGSRSNGVQNYTGR-IITRGVFVDLAEYWGVET-LDPGYPITTAD
Mb1744|M.bovis_AF2122/97            GKWGMVTAEDLQNATPDIRPGDIVVVNTGWHHKYADSAEYYAYSPGFDKK
Rv1716|M.tuberculosis_H37Rv         GKWGMVTAEDLQNATPDIRPGDIVVVNTGWHHKYADSAEYYAYSPGFDKK
MSMEG_3991|M.smegmatis_MC2_155      --VTVTDGRYASHGIDEVPPLVCRGVLVDVPKLRGVDR-LPPGEPVTAAD
                                           .                 *  .     .         *    .

Mflv_2406|M.gilvum_PYR-GCK          LDEIVARQQVEIRSGDIVVVHTGWWTRFL-ATR--DGGEAGSGLHWTCAK
Mvan_4240|M.vanbaalenii_PYR-1       LDEIVARQNVEIRSGDIVVVHTGWWTRFL-STG--DGGEAGSGLHWTCAS
TH_0900|M.thermoresistible__bu      LDEVAAAQGVTIRSGDIVVVHTGWWTRFL-STG--DGAEPGSGLHWRCAI
MMAR_4772|M.marinum_M               LDDVARSQGVTIESGDIVLIRTGWWTRFL-MTA--NKTEPYSGLDWRCAQ
MUL_0343|M.ulcerans_Agy99           LDDVARSQGVTIESGDIVLIRTGWWTRFL-MTA--NKTEPYSGLDWRCAQ
MAV_0883|M.avium_104                LDDVVRAQGVTIERGDILLIRTGWWTRYL-ETG--NKTEPYSGLDWRCAQ
MAB_3566c|M.abscessus_ATCC_199      LDDYLAAKKLEIRSGDALIIRTGFMAARR-GNWRDYAGGAAPGLSLHTAP
Mb1744|M.bovis_AF2122/97            AGEWFAAKGVKAVGTDTQALDHPLATAIA-PHG----PAEAQGGLLPWAV
Rv1716|M.tuberculosis_H37Rv         AGEWFAAKGVKAVGTDTQALDHPLATAIA-PHS----PAEAQGGLLPWAV
MSMEG_3991|M.smegmatis_MC2_155      L------RDADIRHGDVVLIRTGWAQLWHNPDAYIGTDSGVPGLTTDGAR
                                           :       *   :                      *     * 

Mflv_2406|M.gilvum_PYR-GCK          WLHRHEVAAVASDNLMVEDPNPANGVEGTFLPMHMLCLRDMGLMLGEYWD
Mvan_4240|M.vanbaalenii_PYR-1       WLHEHEVAAVAADNLMVEDPDPGNGVEGTFLPMHMLCLRDMGLMLGEYWD
TH_0900|M.thermoresistible__bu      WLHEHEVAAVAADNLMVEDPDPANGVEGTFLPMHMLCLRDMGLMLGEYWD
MMAR_4772|M.marinum_M               WLHDHEVAAVASDNLQVEDP--VSGVDGLFLPLHLLCLRDMGLMLGEYWD
MUL_0343|M.ulcerans_Agy99           WLHDHEVAAVASDNLQVEDP--VSGVDGLFLPLHLLCLRDMGLMLGEYWD
MAV_0883|M.avium_104                WLHDHEVAAVASDNLQVEDP--VSGVDGVFLPFHLLTLRDMGLMLGEYWD
MAB_3566c|M.abscessus_ATCC_199      WLRDHDIAAVATDTWGIEVLP--NEID-VWQPLHVVSLVHTGLAFGEMFD
Mb1744|M.bovis_AF2122/97            REYEAQTGRKVLDDFPDWEP-----CHRAILSQGIYGFENVGGDLDKVTG
Rv1716|M.tuberculosis_H37Rv         REYEAQTGRKVLDDFPDWEP-----CHRAILSQGIYGFENVGGDLDKVTG
MSMEG_3991|M.smegmatis_MC2_155      HLVAAGARVVGADTLALEHIP--PGAGFANLPVHRILLQDSGMNIIEAMN
                                                *                  .     : . *  : :  .

Mflv_2406|M.gilvum_PYR-GCK          LGPLAADCAADGVYEFQLVAPPLKVVGAVGAPVSPIAIK-----------
Mvan_4240|M.vanbaalenii_PYR-1       LGPLAADCAADGVYEFQLVAPPLKVVGAVGAPVSPIAIK-----------
TH_0900|M.thermoresistible__bu      LTDLAADCAADGVYEFQLIAPPLRVIGAVGSPVNPIAIK-----------
MMAR_4772|M.marinum_M               LTALAADCAADGVYEFQLVAPPLRFVGAVGSPVNPIAIK-----------
MUL_0343|M.ulcerans_Agy99           LTALAADCAADGVYEFQLVAPPLRFVGAVGSPVNPIAIK-----------
MAV_0883|M.avium_104                LSALAADCAADGVYEFQLVAPPLRFVGAVGSPVNPIAIK-----------
MAB_3566c|M.abscessus_ATCC_199      LDGLSEDTKTDGVYEFMFVASPLPLTGASGSPVSALAIK-----------
Mb1744|M.bovis_AF2122/97            KRVTFAAFPWRWVGGDGCIVRLVAIVDPTGSYRIETGKAA----------
Rv1716|M.tuberculosis_H37Rv         KRVTFAAFPWRWVGGDGCIVRLVAIVDPTGSYRIETGKAV----------
MSMEG_3991|M.smegmatis_MC2_155      LEALAHT----GAREFVFVGAPLPVVGATGAPIRPLALVEEQHVGSGGQT
                                                .     :   : . .. *:     .