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APNKSTQAYDVLERMIIFQDIQAGVMVSEAELMEKSGFGRTPLREALQRLSRDNLVQVVPRRGILVPPIS VEAQFKLLETRRPLEELAATLAATRARPEQQAAALQRASEFKNFTERDLHELERVLRAGHELVAKSTQNQ FLENAMAPLQGLSRRFWFAHLRSDPDDVAIAIDRHGELLTAIGEQDQERAIAAARSLIDYLTEFAYASVK VPA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_3980 | - | - | 100% (214) | transcriptional regulator, GntR family protein |
| M. smegmatis MC2 155 | MSMEG_0480 | - | 2e-49 | 48.79% (207) | transcriptional regulator, GntR family protein |
| M. smegmatis MC2 155 | MSMEG_0166 | - | 1e-15 | 32.81% (192) | GntR-family protein transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0016 | - | 1e-07 | 28.85% (208) | GntR domain-containing protein |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0068 | - | 9e-17 | 29.69% (192) | GntR family transcriptional regulator |
| M. marinum M | MMAR_0408 | - | 1e-06 | 27.41% (197) | GntR family transcriptional regulator |
| M. avium 104 | MAV_0339 | - | 2e-11 | 29.61% (206) | transcriptional regulator, GntR family protein |
| M. thermoresistible (build 8) | TH_3038 | - | 1e-14 | 29.15% (199) | PUTATIVE putative transcriptional regulator, GntR family |
| M. ulcerans Agy99 | MUL_1058 | - | 6e-06 | 26.70% (191) | GntR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_3051 | - | 3e-10 | 27.55% (196) | GntR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0408|M.marinum_M MNIPLSARRKSRRPLRRAQLSDEVAGHLRAAIMSGTLRPGTFIR-LDETA
MUL_1058|M.ulcerans_Agy99 MNILLSARRESRRPLRRAQLSDEVAGHLRAAIMSGTLRPGTFIR-LDETA
MAV_0339|M.avium_104 ----MAAIDISG------TVRERAARELRDRILTGALPAGSRID-LDAIT
TH_3038|M.thermoresistible__bu ----MSRTVESN-----GDASERAYQAVLQMILDGEAPAGSWLR-EQTLA
MSMEG_3980|M.smegmatis_MC2_155 ----MAP-----------NKSTQAYDVLERMIIFQDIQAGVMVS-EAELM
MAB_0068|M.abscessus_ATCC_1997 ----MIRTVAIS-------ASEEAYRSVKESILNGDIPGGELLS-EGEIS
Mvan_3051|M.vanbaalenii_PYR-1 ---MAAPTEEPSRLALPATLVEVAGNRLRDAILSGELAPGEKII-EEQLC
Mflv_0016|M.gilvum_PYR-GCK -MIGRKDIRVPLSTARRSGLVEQVIDQLRHAVAGQEWRIGDRIPNETVLV
. : : * :
MMAR_0408|M.marinum_M AELGVSITPVREALLKLRGEGMVQLEPHRGHVVLP----------LTRQD
MUL_1058|M.ulcerans_Agy99 AELGVSITPVREALLKLRGEGMVQLEPHRGHVVLP----------LTRQD
MAV_0339|M.avium_104 AEFATSRTPVREALLELSFEGLVQVAPRSGVTVIG----------ISPED
TH_3038|M.thermoresistible__bu EQIGVSRTPVRQALNRLAAEGAIELVPNRGAQVVS----------FSDED
MSMEG_3980|M.smegmatis_MC2_155 EKSGFGRTPLREALQRLSRDNLVQVVPRRGILVPP----------ISVEA
MAB_0068|M.abscessus_ATCC_1997 ARMGCSRTPVREAFLRLETEGWLRLYPKRGALVVP----------ITPEE
Mvan_3051|M.vanbaalenii_PYR-1 ADFGISRAPLREALRRLAQQGLVEHLPRRGSRVTE----------WSPTD
Mflv_0016|M.gilvum_PYR-GCK EKFGVGRNTVREAVRALAHAGILEVRQGDGTYVRATSEVSGALRRLCGEE
. . .:*:*. * . :. * *
MMAR_0408|M.marinum_M IDDIFWLQATIARELAVTATERISEIDIGELEHINDALTAAVGAG--DTE
MUL_1058|M.ulcerans_Agy99 IDDIFWLQATIARELAVTATERISEVVIGELEHINDALTAAVGAG--DTE
MAV_0339|M.avium_104 VLDSFTILGVLTGQAAAWAAERIGPEELATLRELAAEVVAKSGD-----D
TH_3038|M.thermoresistible__bu VEALFDLRARFEPLAVRLAVPQLTEERIAELADLATRMEALLDRRPLDTH
MSMEG_3980|M.smegmatis_MC2_155 QFKLLETRRPLEELAATLAATRARPEQQAAALQRASEFKNFTER---DLH
MAB_0068|M.abscessus_ATCC_1997 RRHVVDARRVIEGAAAARIAERGAPQSLLSDLSALIEVQLGRAAQG-DAA
Mvan_3051|M.vanbaalenii_PYR-1 ILQLFELRNVLERHAIESALPLADLDR--DLEPVRAALEQMDASS--DVL
Mflv_0016|M.gilvum_PYR-GCK LREVLEVRRALEVEAARLAASRRTPADVAEMRGLLARRDERDSAG--DVE
. :
MMAR_0408|M.marinum_M AIAALEFAFHRVLNQSSGRIKLAWFLL------------NAAR---YMPA
MUL_1058|M.ulcerans_Agy99 AIAALEFAFHRVLNQSSGRIKLAWFLL------------NAAR---YMPA
MAV_0339|M.avium_104 SIGEANWHFHQMIHRAAHSPRLANQIK------------HAAR---VVPT
TH_3038|M.thermoresistible__bu QMSRLNNAFHGIFLAEAGNRHLTAAMQ------------AVVRPA-LVTL
MSMEG_3980|M.smegmatis_MC2_155 ELERVLRAGHELVAKSTQNQFLENAMA------------PLQGLSRRFWF
MAB_0068|M.abscessus_ATCC_1997 GFAAADVDFHRAIVAKLGNPLLENFYD------------SLRERQRRMAA
Mvan_3051|M.vanbaalenii_PYR-1 SLDDAHRAFHAAVVGLAKNRQLDIALEPILLKLQLPMARNMREEARQHAG
Mflv_0016|M.gilvum_PYR-GCK AFARIDTEFHLAVVRCARNNTLIELYR-----------------GLLEAV
: * . *
MMAR_0408|M.marinum_M QLYASDPQWGAAAVDNHRQLIAALRRRDTAAVIEHSVWQFTDAAHRLTQM
MUL_1058|M.ulcerans_Agy99 QLYASDPQWGAAAVDNHRQLIAALRRRDTAAVIEHSVWQFTDAAHRLTQM
MAV_0339|M.avium_104 NFLTLFPEHEKHSLDEHAQLLDALGDKDVERARAIAERHVLDAGRSLAEW
TH_3038|M.thermoresistible__bu TFQKYSERALRLSMHHHAELVEAARARDPEWAEAVMRAHILAARHAGE--
MSMEG_3980|M.smegmatis_MC2_155 AHLRSDPDDVAIAIDRHGELLTAIGEQDQERAIAAARSLIDYLTEFAYAS
MAB_0068|M.abscessus_ATCC_1997 AAIGVDPVRVARSVAGHRALVDALAAGDAARFSTELVEHMKVVTEVD---
Mvan_3051|M.vanbaalenii_PYR-1 PGRRHRPGAADEGIGRHKAILSALETNDPAAVVTAIRDHGHLHYLGLAP-
Mflv_0016|M.gilvum_PYR-GCK TASVAHTRHVPVDVCDHGVLLDHIAAGDPDLAARTAGEFLDRIINGLGSA
: * :: *
MMAR_0408|M.marinum_M LETNGIFN-
MUL_1058|M.ulcerans_Agy99 LETNGIFN-
MAV_0339|M.avium_104 LEQRRDGER
TH_3038|M.thermoresistible__bu ---------
MSMEG_3980|M.smegmatis_MC2_155 VKVPA----
MAB_0068|M.abscessus_ATCC_1997 ---------
Mvan_3051|M.vanbaalenii_PYR-1 ---------
Mflv_0016|M.gilvum_PYR-GCK DSS------