For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TEPIAAQQIRFITRLGAAMGAAHYPVSLIRQMLDRASSAYGVRNDFIALPNYVQVVGPTGAHGTIVEAAH LDHELRFAQMFPLARLVRDAMRGAVRPDDGEAQLDRVLEMPDRFPGWVAVVGYGVQSAGLALVLEPTALN LLVATVLGFLVGLFHVVVQRAGMLQHLLPAVSAFTVTAICLLGAHRLGMDHVNLRALIPPLAMFLPGAAI TLAVVELTARDVISGTSRLIAGFVQIAQLAFGILIATQFLGVDGSSLSTDAVNKIGPWAPWLGVLVYAIG VLLFLAPPLSFLPWLVVICYTAFAAQYLGGTVLGSYASGFCGGLVLTVSALAISRRRGAPPTITLILPGF WLLVPGSMGLIGVTELFGADGDSAFPATVISMISVALGLQAGLVLWQLLRLRRSTAPQRAAR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3837 | - | - | 100% (413) | hypothetical protein MSMEG_3837 |
M. smegmatis MC2 155 | MSMEG_3459 | - | 2e-14 | 26.10% (341) | hypothetical protein MSMEG_3459 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3764 | - | 2e-09 | 23.28% (335) | transmembrane protein |
M. gilvum PYR-GCK | Mflv_0954 | - | 1e-10 | 24.11% (336) | hypothetical protein Mflv_0954 |
M. tuberculosis H37Rv | Rv3737 | - | 2e-09 | 23.28% (335) | transmembrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0256c | - | 7e-41 | 29.15% (398) | hypothetical protein MAB_0256c |
M. marinum M | MMAR_3034 | - | 3e-09 | 22.42% (339) | transmembrane protein |
M. avium 104 | MAV_3251 | - | 1e-06 | 25.45% (220) | ABC transporter efflux protein, DrrB family protein |
M. thermoresistible (build 8) | TH_0574 | - | 1e-151 | 67.66% (402) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2274 | - | 2e-09 | 22.42% (339) | transmembrane protein |
M. vanbaalenii PYR-1 | Mvan_5838 | - | 3e-12 | 25.07% (351) | hypothetical protein Mvan_5838 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3837|M.smegmatis_MC2_155 -------------------------------------------------- TH_0574|M.thermoresistible__bu -------------------------------------------------- Mflv_0954|M.gilvum_PYR-GCK ---MLPSPMVPSRQPRTPVPFRRASVSWPPMEPDSTPRFRRGLRIAMRGR Mvan_5838|M.vanbaalenii_PYR-1 --------MGSDR-------------------SDGMARRRRALHFALKGR Mb3764|M.bovis_AF2122/97 ---------------------------MDQDRSDNTA-LRRGLRIALRGR Rv3737|M.tuberculosis_H37Rv ---------------------------MDQDRSDNTA-LRRGLRIALRGR MMAR_3034|M.marinum_M MGGLAPRTVVAVVFAVRGSPSKISILPGVQDRLDGVAGSRRGLRIALRGR MUL_2274|M.ulcerans_Agy99 ----------------------------MQDRLDGVAGSRRGLRIALRGR MAB_0256c|M.abscessus_ATCC_199 --------------------------------MTALPRRGRALALVRKTL MAV_3251|M.avium_104 -------------------------------------------------- MSMEG_3837|M.smegmatis_MC2_155 -----------------MTEPIAAQQIRFITRLGAAMGAAHYPVSLIRQM TH_0574|M.thermoresistible__bu ------------------MEHPADPQVRFLARLGAAMGAANYPVTLIRQM Mflv_0954|M.gilvum_PYR-GCK RDPATGAGQRSRRPQNTSDERHTRKVLDLTVRLAEVMLSAGSGSADVVAT Mvan_5838|M.vanbaalenii_PYR-1 RDPASGAGQR-RRTSGRLSERHTRKVLDLTIRLAEVMLSSGSGTADVVAT Mb3764|M.bovis_AF2122/97 RDPLPVAGRRSRTSGG-IGDLHTRKVLDLTIRLAEVMLSSGSGTADVVAT Rv3737|M.tuberculosis_H37Rv RDPLPVAGRRSRTSGG-IDDLHTRKVLDLTIRLAEVMLSSGSGTADVVAT MMAR_3034|M.marinum_M RDPVPVAGQRSRTSSG-MGDQHVRKVLDLTIRLAEVMLSSGSGTADVVAT MUL_2274|M.ulcerans_Agy99 RDPVPVAGQRSRTSSG-MGDQHVRKVLDLTIRLAEVMLSSGSGTADVVAT MAB_0256c|M.abscessus_ATCC_199 KDKP--------VPLADARHFPDAEVVTMLRMLGIAMLEVGQPTNLVLAK MAV_3251|M.avium_104 -------------------------------------------------- MSMEG_3837|M.smegmatis_MC2_155 LDRASSAYGVRNDFIALPNYVQVVGPTGAHGTIVEAAHLDHELR---FAQ TH_0574|M.thermoresistible__bu LDRASAAYGTSHEVVALPNSVQVTGPAPG-GTATAAAHQDAELR---FDQ Mflv_0954|M.gilvum_PYR-GCK AQDVAQAYRLNDCVVDVFVTTVFVSAPPTTESPAVTIVRSVRARSTDYSR Mvan_5838|M.vanbaalenii_PYR-1 AQDVAQAYQLTDCVVDVFVTTIFVSALPTADSPPVTIVRAVQARSTDYTR Mb3764|M.bovis_AF2122/97 AQDVAQAYQLTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYSR Rv3737|M.tuberculosis_H37Rv AQDVAQAYQLTDCVVDITVTTIIVSALATTDTPPVTIMRSVRTRSTDYSR MMAR_3034|M.marinum_M ANDVAQAYQITDCVVDITVTTIIVSALPTAESAPVTIVRSVRTRSTNFTR MUL_2274|M.ulcerans_Agy99 ANDVAQAYQITDCVVDITVTTIIVSALPTAESTPVTIVRSVRTRSTNFTR MAB_0256c|M.abscessus_ATCC_199 LHDIAPQYTDKELRAVVLPTVLIIQIDGVTGQLEVEESTRNTAQ---LDQ MAV_3251|M.avium_104 -------------------------------------------------- MSMEG_3837|M.smegmatis_MC2_155 MFPLARLVRDAMRGAVRPDDGEAQLDRVLEMPDRFPGWVAVVGYGVQSAG TH_0574|M.thermoresistible__bu MFPLARLVSAAMRGAVSPTDGNDRLDRILARPAPYPPWLTVLGYGVWSTG Mflv_0954|M.gilvum_PYR-GCK LAALDELVRRITSGGVSVDQAHDAMDELSERPHPYPRWVATAGWAGFALG Mvan_5838|M.vanbaalenii_PYR-1 LADLDRLVRRITSGGVSVDEAHEAMDELSEQPHPYPRWIATAGWAGFALG Mb3764|M.bovis_AF2122/97 LAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWLATAGAAGFALG Rv3737|M.tuberculosis_H37Rv LAELDRLVQRITSGGVAVDQAHEAMDELTERPHPYPRWLATAGAAGFALG MMAR_3034|M.marinum_M LAELDRLVQEITAGGVTVDEAHEAMDELTQRPHPYPRWLATVCWAGFSLG MUL_2274|M.ulcerans_Agy99 LAELDRLVQEITAGGVTVDEAHEAMDELTQRPHPYPRWLATVCWAGFSLG MAB_0256c|M.abscessus_ATCC_199 AGHIDAIADMAVVGAIAPADAIARIYEIRCLKPRFGTVLTVVGHTILTLG MAV_3251|M.avium_104 MSALAALTERSLKSAARDGE----------------MIFEILSPAAYLAG : :. .. : . * MSMEG_3837|M.smegmatis_MC2_155 LALVLEPTALNLLVATVLGFLVGLFHVVVQRAGMLQHLLPAVSAFTVTAI TH_0574|M.thermoresistible__bu LGLVLEPSPLNLLGAAALGLIVGVLAVAGQRFGQLGPLVPVTAAFVVATV Mflv_0954|M.gilvum_PYR-GCK IAILLGGNWLVCLLAAATSAVIDQTGRRLNRAGTPLFFQQVAGALIATLV Mvan_5838|M.vanbaalenii_PYR-1 IAMLLGGTWLTCILAAGTSVLIDRSGRLLNRVGTPMFFQQAAGASIATLV Mb3764|M.bovis_AF2122/97 VAMLLGGTWLTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLV Rv3737|M.tuberculosis_H37Rv VAMLLGGTWLTCVLAAVTSGVIDRLGRLLNRIGTPLFFQRVFGAGIATLV MMAR_3034|M.marinum_M IAMMLGANWRTCAIAALTAATIDRLGRVLNRIGTPYFFQRVTGAAVATLV MUL_2274|M.ulcerans_Agy99 IAMMLGANWRTCAIAALTAATIDRLGRVLNRIGTPYFFQRVTGAAVATLV MAB_0256c|M.abscessus_ATCC_199 FGLALAPTSSALPAYLVLGLIVGVLMLATNPMPTLAATMPAVAAFVVTVI MAV_3251|M.avium_104 FSVALHG------------------LIDTGRISYSQYLLPAVVAQSMIFV ..: * . * : MSMEG_3837|M.smegmatis_MC2_155 CLLGAHRLGMDHVNLRALIPPLAMFLPGAAITLAVVELTARDVISGTSRL TH_0574|M.thermoresistible__bu SIAVVEHLELDHVGLRALIPPLAMFLPGAAITLAVIELTARDIVSGSARL Mflv_0954|M.gilvum_PYR-GCK AVAAYRLAGLGPTALVATG--IVMLLSGMTLVGSVQDALTGYMITAAARL Mvan_5838|M.vanbaalenii_PYR-1 AVAAFLFAGQGPTTLVATG--IVMLLAGMTLVGSVQDALTGYMLTAVARL Mb3764|M.bovis_AF2122/97 AVAAYLIAGQDPTALVATG--IVVLLSGMTLVGSMQDAVTGYMLTALARL Rv3737|M.tuberculosis_H37Rv AVAAYLIAGQDPTALVATG--IVVLLSGMTLVGSMQDAVTGYMLTALARL MMAR_3034|M.marinum_M AVAAYLFTGEGLAALVATG--IVMLLSGLTLVGAMQDAITGYMVTAVARI MUL_2274|M.ulcerans_Agy99 AVAAYLFTGEGLAALVATG--IVMLLSGLTLVGAMQDAITGYMVTAVARI MAB_0256c|M.abscessus_ATCC_199 STLIVANVPSEGLARVLAP-ALIAVLPGMTLTIGALELTSTQLMAGSTRI MAV_3251|M.avium_104 GLMTADRAARDHLFGFGER----------IRTLPVPAAATVTARVTATLM . : : : MSMEG_3837|M.smegmatis_MC2_155 IAGFVQIAQLAFGILIATQFLGVD--GSSLSTDAVNKIGPWAPWLGVLVY TH_0574|M.thermoresistible__bu MAGFVQLAQLAFGILIAAQLLGED--ESRLSAEPLNKLGSWAPWLGVAVY Mflv_0954|M.gilvum_PYR-GCK GEVLFLTAGIVVGILAGLQVASLAGITIELQVDATEIMVLPNQPASIAWA Mvan_5838|M.vanbaalenii_PYR-1 GDVLFLTLGIVVGILAGLQIAALAGIQIQLRVDATEYFVVPTTPRQIVVA Mb3764|M.bovis_AF2122/97 GDALFLTAGIVVGILISLRGVTNAGIQIELHVDATTTLATPGMPLPILVA Rv3737|M.tuberculosis_H37Rv GDALFLTAGIVVGILISLRGVTNAGIQIELHVDATTTLATPGMPLPILVA MMAR_3034|M.marinum_M GEALFLTSGIVVGILAGLQIAKTAGVEIELRVHGSGGFVVPQGPLPILLT MUL_2274|M.ulcerans_Agy99 GEALFLTSGIVVGILAGLQIAKTAGVEIELRVHGSGGFVVPQGPLPILLT MAB_0256c|M.abscessus_ATCC_199 VYGIAQLMLLALGVVIGVKVAGPP-----QPSPLGPPLGSWTIALAVPVI MAV_3251|M.avium_104 RGSFCLVMALVAGYVLGFRLAGGL-------------------------- : :. * : . : MSMEG_3837|M.smegmatis_MC2_155 AIGVLLF--------LAPPLSFLPWLVVICYTAFAAQYLGGTVLGSYASG TH_0574|M.thermoresistible__bu ALGVMLF--------FAPPRSFLPWLLAVCYAAFTAQFLGDLALGSYASG Mflv_0954|M.gilvum_PYR-GCK VFGATVAGACLTIASYARLRAVATAGLAAGLAELVLIALWSGGLGSVIAT Mvan_5838|M.vanbaalenii_PYR-1 VSGAALAGACLVIASYAKWRSVLTAGVAAGLAEAVLIGLGRAGVGQVVAT Mb3764|M.bovis_AF2122/97 VSGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGAAGFGRVVAT Rv3737|M.tuberculosis_H37Rv VSGAALSGVCLTIASYAPLRSVATAGLSAGLAELVLIGLGAAGFGRVVAT MMAR_3034|M.marinum_M VLGAMLAGACLTVASYAPLRSAVTAGFAAGLADLVLIGLGTAGFGQVIAT MUL_2274|M.ulcerans_Agy99 VLGAMLAGACLTVASYAPLRSAVTAGFAAGLADLVLIGLGTAGFGQVIAT MAB_0256c|M.abscessus_ATCC_199 AVGFYLY--------KSAPRGSLIWLVLAIGVAMLGQRLGSLFLAPAMTG MAV_3251|M.avium_104 --------------------VYSAAFVFISLLLCLAVTLGADALGSSAKS . * .. MSMEG_3837|M.smegmatis_MC2_155 FCGGLVLTVSALAISRRRGAPPTITLILPGFWLLVPGSMGLIGVTELFGA TH_0574|M.thermoresistible__bu FAGGLVLTGCALMLSRRPGAPPAITMILPGFWLLVPGSMGLIGFAELFGA Mflv_0954|M.gilvum_PYR-GCK GCAAVGVGFLATLISIRR-QAPALVTATAGITPMLPGMAVFRAVFYFAVE Mvan_5838|M.vanbaalenii_PYR-1 GTAAVGVGLLATLISIRR-QAPALVTATAGITPMLPGMAVFRAVFYFAVE Mb3764|M.bovis_AF2122/97 WTAAIGVGFLATLISIRR-QAPALVTATAGIMPMLPGLAVFRAVFAFAVN Rv3737|M.tuberculosis_H37Rv WTAAIGVGFLATLISIRR-QAPALVTATAGIMPMLPGLAVFRAVFAFAVN MMAR_3034|M.marinum_M GIAAVGVGFLATLISIRR-QALALVTATAGIVPMLPGLAVFRAVFYFAAD MUL_2274|M.ulcerans_Agy99 GIAAVGVGFLATLISIRR-QALALVTATAGIVPMLPGLAVFRAVFYFAAD MAB_0256c|M.abscessus_ATCC_199 FVGAVAVVPFALFAARFKGAPSAIVLLLAAFWCLVPGALSFVNVSEVAAT MAV_3251|M.avium_104 VQGASHLLFVPQLLLFMLSTGIAPEQTFPG---WLRPYVRNQPVSQFAET .. : . : .. : . . MSMEG_3837|M.smegmatis_MC2_155 DGDSAFPATVISMISVALGLQAGLVLWQLLRLRRSTAPQRAAR------- TH_0574|M.thermoresistible__bu DGDSALGVTFISMISVALGLQAGLVLWQLLRRAR----RRAG-------- Mflv_0954|M.gilvum_PYR-GCK KDFAAGMTQAMVAAATALAIGAGVVMGELLGSPLRYRAGRIGQFLQVQGP Mvan_5838|M.vanbaalenii_PYR-1 RDFAAGMAQALAAAATALAIGAGVVMGELAGSPLRYRAGRISDFLRVEGP Mb3764|M.bovis_AF2122/97 DTPDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGP Rv3737|M.tuberculosis_H37Rv DTPDGGLTQLLEAAATALALGSGVVLGEFLASPLRYGAGRIGDLFRIEGP MMAR_3034|M.marinum_M SHFDEAQSQLLSAAATALALGSGVVLGEFVGSPLRYRAGRIGHLLRIEGP MUL_2274|M.ulcerans_Agy99 SHFDEAQSQLLSAAATALALGSGVVLGEFVGSPLRYRAGRIGHLLRIEGP MAB_0256c|M.abscessus_ATCC_199 G--HANLTALLDTCMAIFSIALGLLVGASLHRGMRYALTVSR-------- MAV_3251|M.avium_104 LRGLARGHVIVGNVAATLAWCVGAVL---VFGAITLRMQRRG-------- : . :. * :: MSMEG_3837|M.smegmatis_MC2_155 -------------------------------------------------- TH_0574|M.thermoresistible__bu -------------------------------------------------- Mflv_0954|M.gilvum_PYR-GCK PGLRRAVGRVVRLGPAEDQDATPASPYQRSWSVALEPLPAEPALEGSHTD Mvan_5838|M.vanbaalenii_PYR-1 PGLRRAVGNVVALRPAADQQSS-RSPHQRSWSVALEPELSEVATEANGED Mb3764|M.bovis_AF2122/97 PGLRRAVGRVVRLQPAKSQQPT-GTGGQRWRSVALEPTTADDVDAGYRGD Rv3737|M.tuberculosis_H37Rv PGLRRAVGRVVRLQPAKSQQPT-GTGGQRWRSVALEPTTADDVDAGYRGD MMAR_3034|M.marinum_M PGLRRAVGRVVRLEPTKNAQST-NTRGQQSRSVALEPASTDHSDAAEDND MUL_2274|M.ulcerans_Agy99 PGLRRAVGRVVRLEPTKNAQST-NTRGQQSRSVALEPASTDHSDAAEDND MAB_0256c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_3251|M.avium_104 -------------------------------------------------- MSMEG_3837|M.smegmatis_MC2_155 ------------------ TH_0574|M.thermoresistible__bu ------------------ Mflv_0954|M.gilvum_PYR-GCK TPGTEDAPDAT------- Mvan_5838|M.vanbaalenii_PYR-1 PAPERDATGER------- Mb3764|M.bovis_AF2122/97 WPATCTSATEVR------ Rv3737|M.tuberculosis_H37Rv WPATCTSATEVR------ MMAR_3034|M.marinum_M RTGGHGGHGGHGGHRDES MUL_2274|M.ulcerans_Agy99 RTGGHGGHGGHGGHRDES MAB_0256c|M.abscessus_ATCC_199 ------------------ MAV_3251|M.avium_104 ------------------