For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SITVGPPSDHPDTETRRNKSLSALRAAPWSARISGALLVLVAAWAVAPGVFTSADPLNGNRLEKFQPPSW AHWFGTDHLGRDVLTRVIHGTSHTLLTAGLAVAVGLVVGSIIGILAGVSGPVADAVGMRLSDVLLALPGF LVSVWIVTAYGAGPLSVGIGVGIGSIAIFARVFRAEVMRVRALDYVEAAFLSGESRWSVIRRHIVPNAIG AVVALAVIDLSAAILAISALGYLGYSAPPPTPEWGLLVAEGRSYLATAWWLTSLPGAVILVVIVALGVVS RRVLKSNNI*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_2845 | - | - | 100% (290) | ABC transporter permease protein |
| M. smegmatis MC2 155 | MSMEG_4099 | - | 4e-64 | 45.70% (256) | ABC transporter permease protein |
| M. smegmatis MC2 155 | MSMEG_4387 | - | 7e-53 | 40.16% (249) | ABC transporter permease protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3688c | dppC | 2e-33 | 33.33% (249) | peptide ABC transporter transmembrane protein |
| M. gilvum PYR-GCK | Mflv_2759 | - | 4e-42 | 35.77% (246) | binding-protein-dependent transport systems inner membrane |
| M. tuberculosis H37Rv | Rv3664c | dppC | 2e-33 | 33.33% (249) | peptide ABC transporter transmembrane protein |
| M. leprae Br4923 | MLBr_01123 | - | 1e-25 | 29.60% (250) | putative binding-protein dependent transport protein |
| M. abscessus ATCC 19977 | MAB_0721 | - | 1e-30 | 32.17% (258) | oligopeptide ABC transporter, permease protein |
| M. marinum M | MMAR_5152 | dppC | 7e-32 | 31.54% (260) | dipeptide-transport integral membrane protein ABC |
| M. avium 104 | MAV_3419 | - | 1e-122 | 81.13% (265) | ABC transporter permease protein |
| M. thermoresistible (build 8) | TH_2705 | - | 2e-44 | 39.51% (243) | PUTATIVE binding-protein-dependent transport systems inner |
| M. ulcerans Agy99 | MUL_4238 | dppC | 8e-32 | 31.54% (260) | dipeptide-transport integral membrane protein ABC |
| M. vanbaalenii PYR-1 | Mvan_3775 | - | 2e-41 | 37.14% (245) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment
MLBr_01123|M.leprae_Br4923 MTLTEGLSISEKTN-FASRKTLVLRRFAHNRTASVSLMLLVLLFVACYLL
MAB_0721|M.abscessus_ATCC_1997 MTTSVSKPHGNRLRRLPGADLLRSVHGLQRWTLVVGLVLVAGFIAIAVLA
Mflv_2759|M.gilvum_PYR-GCK MTTTDPQS----------TRLSSWRLLALNPVTLISALVLIAVAVVAVTA
Mvan_3775|M.vanbaalenii_PYR-1 MTTTDPND----------TRLSSWRLLAGNPVTLVSALVLVAVTVVAVTA
TH_2705|M.thermoresistible__bu MTADDLTGGEPDAV----SRVAAWRLLAANPVTLLSAALLALLVAVAVTA
Mb3688c|M.bovis_AF2122/97 ---------------------------------MIAAALILLILVVAAFP
Rv3664c|M.tuberculosis_H37Rv ---------------------------------MIAAALILLILVVAAFP
MMAR_5152|M.marinum_M ------------MAELGGFWFDILGGLRRRPKFVIAAVLIVFILVVAAFP
MUL_4238|M.ulcerans_Agy99 ------------MAELRGFWFDILGGLRRRPKFVIAAVLIVFILFVAAFP
MSMEG_2845|M.smegmatis_MC2_155 -MSITVGPPSDHPDTETRRNKSLSALRAAPWSARISGALLVLVAAWAVAP
MAV_3419|M.avium_104 -----------------------MSARTASWPVRISAAVLILTAAWAAAP
:. :: .
MLBr_01123|M.leprae_Br4923 PSLLPYSYDDLDFN----ALLQPPNTRHWLGTNALGQDLLAQTLRGMQKS
MAB_0721|M.abscessus_ATCC_1997 PVLAPYGFSQTSADGLDFVRQQAPSWQHWFGTSVRGEDVLSRVLFGARTA
Mflv_2759|M.gilvum_PYR-GCK NWIIPYGVNDVDVP----NALAPPSGSHWFGTDELGRDVLSRVLVATQAS
Mvan_3775|M.vanbaalenii_PYR-1 NWLAPYGVNDVDVP----NALAPPSASHWFGTDELGRDVLSRVLVAVQAS
TH_2705|M.thermoresistible__bu PWLAPYGVNDINVP----EALQPPSAAHWFGTDELGRDVLSRVLVAIQAS
Mb3688c|M.bovis_AF2122/97 SLFTAADPTYADPS----QSMLAPSAAHWFGTDLQGHDIYSRTVYGARAS
Rv3664c|M.tuberculosis_H37Rv SLFTAADPTYADPS----QSMLAPSAAHWFGTDLQGHDIYSRTVYGARAS
MMAR_5152|M.marinum_M SLFTGIDPSYADPS----QSMLSPSTAHWFGTDLQGHDIYARTVYGARAS
MUL_4238|M.ulcerans_Agy99 SLFTGIDPSYADPS----QSMLSPSTAHWFGTDLQGHDIYARTVYGARAS
MSMEG_2845|M.smegmatis_MC2_155 GVFTSADPLNGNRL----EKFQPPSWAHWFGTDHLGRDVLTRVIHGTSHT
MAV_3419|M.avium_104 GLFTDRNPLKGRPV----DKFQPPSAAHWFGTDHLGRDVLTRVIYGTSHT
: . .*. **:**. *.*: ::.: . :
MLBr_01123|M.leprae_Br4923 MLIGVCVALISTSIAATVGSIAGYFGRWRDRVLMWVVDLLLVVPSFVL--
MAB_0721|M.abscessus_ATCC_1997 LLVIVTSLVVSLPAGVVLGLTSGYLGGWLDRALVLVMDALYAMPSLLLAI
Mflv_2759|M.gilvum_PYR-GCK MRIAVVSVAFAVIVGVAVGVIAGYRGGWLDTVLMRVVDVMFAFPVLLLAL
Mvan_3775|M.vanbaalenii_PYR-1 MRIAAVSVALAMVVGVAVGVVAGYRGGWLDTVLMRVVDVMFAFPVLLLAL
TH_2705|M.thermoresistible__bu LRVAAVSVAFAAAVGILVGLLAGYRGGWLDTVLMRLVDVLFAFPVLLLAL
Mb3688c|M.bovis_AF2122/97 VTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAI
Rv3664c|M.tuberculosis_H37Rv VTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAI
MMAR_5152|M.marinum_M VVVGLGATAAAFIAGVTLGALAGYYGGWLDAVVSRITDIFFGLPLLLAAI
MUL_4238|M.ulcerans_Agy99 VVVGLGATAAAFIAGVTLGALAGYYGGWLDAVVSRITDIFFGLPLLLAAI
MSMEG_2845|M.smegmatis_MC2_155 LLTAGLAVAVGLVVGSIIGILAGVSGPVADAVGMRLSDVLLALPGFLVSV
MAV_3419|M.avium_104 VATAGLAVAVGLLLGSSVGIAAGVSGPVVDAVAMRASDVLLALPGFLTSV
: . :* :* * * . * : .* ::
MLBr_01123|M.leprae_Br4923 ---IAIMSPQTKSSDNIMLLVLLLAGFGWMVSSRMVRGMTMSLRKSEFIR
MAB_0721|M.abscessus_ATCC_1997 VVSIAVTGGQSSTGGGILAAAIAIMAVFVPQYFRVVRNATVGVKQEPFVD
Mflv_2759|M.gilvum_PYR-GCK AV-VAILGP------GVTTTILAIGIVYTPIFARVARASTLGVRTEPYVS
Mvan_3775|M.vanbaalenii_PYR-1 AV-VAILGP------GVTTTILAIAIVYTPIFARVARASTLGVRTEPYVS
TH_2705|M.thermoresistible__bu AI-VAILGP------GMTTTMLAIGIVFTPIFARVARAGTLGVRVEPFVQ
Mb3688c|M.bovis_AF2122/97 VLMQVMHHR------TVWTVIAILALFGWPQVARIARGAVLEVRASDYVL
Rv3664c|M.tuberculosis_H37Rv VLMQVMHHR------TVWTVIAILALFGWPQVARIARGAVLEVRASDYVL
MMAR_5152|M.marinum_M VLMQVMHHR------TVWTVIAILALFGWPQIARIARSSVLEVRGSDFVL
MUL_4238|M.ulcerans_Agy99 VLMQVMHHR------TVWTVIAILALFGWPQIARIARSSVLEVRGSDFVL
MSMEG_2845|M.smegmatis_MC2_155 WIVTAYGAG-------PLSVGIGVGIGSIAIFARVFRAEVMRVRALDYVE
MAV_3419|M.avium_104 WIVTAYGPG-------PLSVGIGVGIGSIAVFARVFRAEVLRVRALDYVE
. : *: * .: :: ::
MLBr_01123|M.leprae_Br4923 AGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLGFGI
MAB_0721|M.abscessus_ATCC_1997 AARVTGAGTPRILFRHILSNVTSSLPVIITLNGAEAILTLAGLGFLGFGI
Mflv_2759|M.gilvum_PYR-GCK VSRAMGAGDLYILRRHILPNIAGPLIVQTSLSLAFAILSEAALSFLGLGI
Mvan_3775|M.vanbaalenii_PYR-1 ASRAMGTGDLYILRRHILPNIAGPLIVQTSLSLAFAILSEAALSFLGLGI
TH_2705|M.thermoresistible__bu ASHTMGTGHAYILRRHILPNIAAPLIVQTSLSLAFAILAEAALSFLGLGI
Mb3688c|M.bovis_AF2122/97 AAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGL
Rv3664c|M.tuberculosis_H37Rv AAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGL
MMAR_5152|M.marinum_M AAKALGMSRFQILLRHALPNAIGPVIAVATVALGIFIVTEATLSYLGVGL
MUL_4238|M.ulcerans_Agy99 AAKALGMSRFQILLRHALPNAIGPVIAVATVALGIFIVTEATLSYLGVGL
MSMEG_2845|M.smegmatis_MC2_155 AAFLSGESRWSVIRRHIVPNAIGAVVALAVIDLSAAILAISALGYLGYSA
MAV_3419|M.avium_104 AAFLSGETRWSVIRRHIVPNAAGAVIALAVIDLSGAILLISALGYLGYSA
.. * :: * :.* . : : . *: : *.:** .
MLBr_01123|M.leprae_Br4923 KPPDVSLG--TLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLRD
MAB_0721|M.abscessus_ATCC_1997 EPTQAAEWGYDLNKALSDVANGIWWTGVFPGIAIVLVVLGMTLVGESLNE
Mflv_2759|M.gilvum_PYR-GCK QPPQPSLG--RMIFDSQGFVTMAWWMAVFPGAAIFLIVLAFNLFGDGLRD
Mvan_3775|M.vanbaalenii_PYR-1 QPPQPSLG--RMIFDSQGFVTMAWWMAVFPGAAIFVIVLAFNLLGDGLRD
TH_2705|M.thermoresistible__bu QPPEPSLG--RMIFDSQGFVTLAWWMAVFPGAAIVAAVLACNLFGDGLRD
Mb3688c|M.bovis_AF2122/97 PTSVVSWG--GDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALRD
Rv3664c|M.tuberculosis_H37Rv PTSVVSWG--GDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALRD
MMAR_5152|M.marinum_M PPTVVSWG--GDINVAQMRLRAGSPILFYPAGALAVTVLAFMMMGDALRD
MUL_4238|M.ulcerans_Agy99 PPTVVSWG--DDINVAQMRLRAGSPILFYPAGALAVTVLAFMMMGDALRD
MSMEG_2845|M.smegmatis_MC2_155 PPPTPEWG--LLVAEGRSYLATAWWLTSLPGAVILVVIVALGVVSRRVLK
MAV_3419|M.avium_104 PPPTPEWG--LLVAEGRRYLATAWWLSTLPGAVVLSVILALGVLSRRALT
.. *. .: :: : .
MLBr_01123|M.leprae_Br4923 AFDPVSKHLRR-------------------
MAB_0721|M.abscessus_ATCC_1997 VINPLLRTRRGEA-----------------
Mflv_2759|M.gilvum_PYR-GCK VLDPKQRTTIEARRLQR-------------
Mvan_3775|M.vanbaalenii_PYR-1 VLDPKQRTTVEARRRER-------------
TH_2705|M.thermoresistible__bu VLDPKQRTVIETQRRARQRPGRGRRAGSAW
Mb3688c|M.bovis_AF2122/97 ALDPASRAWRA-------------------
Rv3664c|M.tuberculosis_H37Rv ALDPASRAWRA-------------------
MMAR_5152|M.marinum_M ALDPASRAWRA-------------------
MUL_4238|M.ulcerans_Agy99 ALDPASRAWRA-------------------
MSMEG_2845|M.smegmatis_MC2_155 SNNI--------------------------
MAV_3419|M.avium_104 SHRI--------------------------