For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTALAPARTSVTSIPRRRVRPAVILAAAYLALMLAWAVAPGAFTSGTPYDTDIENPLKPPSFEHWFGTDA SGRDIFTRVVYGTQSSLAIGVGATALALLAAIILGFGAGLGGRFADGAISRFIEVVLSIPGLLLALVFIA MFGPGVVTQILAVAIGSAVGYARMVRGQVIAVKDSGYVHAATALGHSRGQIIRRHVFPNAMRPLVVLGTM GIGQSIVWASSLSFLGLGVAPPAPEWGAMLNAGRDFVSTAWWLELFPGLAIVGCTLAVTVVGRYLQQRLE GRLS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4387 | - | - | 100% (284) | ABC transporter permease protein |
| M. smegmatis MC2 155 | MSMEG_4099 | - | 1e-59 | 40.42% (287) | ABC transporter permease protein |
| M. smegmatis MC2 155 | MSMEG_2845 | - | 7e-53 | 40.16% (249) | ABC transporter permease protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3688c | dppC | 7e-41 | 35.27% (258) | peptide ABC transporter transmembrane protein |
| M. gilvum PYR-GCK | Mflv_2759 | - | 5e-50 | 36.79% (280) | binding-protein-dependent transport systems inner membrane |
| M. tuberculosis H37Rv | Rv3664c | dppC | 7e-41 | 35.27% (258) | peptide ABC transporter transmembrane protein |
| M. leprae Br4923 | MLBr_01123 | - | 3e-29 | 29.55% (264) | putative binding-protein dependent transport protein |
| M. abscessus ATCC 19977 | MAB_0428 | - | 3e-37 | 33.84% (263) | peptide ABC transporter DppC |
| M. marinum M | MMAR_5152 | dppC | 1e-42 | 35.23% (264) | dipeptide-transport integral membrane protein ABC |
| M. avium 104 | MAV_3419 | - | 4e-52 | 39.04% (251) | ABC transporter permease protein |
| M. thermoresistible (build 8) | TH_2705 | - | 1e-49 | 37.69% (260) | PUTATIVE binding-protein-dependent transport systems inner |
| M. ulcerans Agy99 | MUL_4238 | dppC | 3e-42 | 35.23% (264) | dipeptide-transport integral membrane protein ABC |
| M. vanbaalenii PYR-1 | Mvan_3775 | - | 2e-50 | 37.14% (280) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3688c|M.bovis_AF2122/97 -----------------------------------------MIAAALILL
Rv3664c|M.tuberculosis_H37Rv -----------------------------------------MIAAALILL
MMAR_5152|M.marinum_M --------------------MAELGGFWFDILGGLRRRPKFVIAAVLIVF
MUL_4238|M.ulcerans_Agy99 --------------------MAELRGFWFDILGGLRRRPKFVIAAVLIVF
MAB_0428|M.abscessus_ATCC_1997 MSDPVNTPGPVSGPDATAESLAEQADLWGNAWKYLRRSGFFITGSILLTI
MSMEG_4387|M.smegmatis_MC2_155 ------------MTALAPAR------TSVTSIPRRRVRPAVILAAAYLAL
MAV_3419|M.avium_104 ----------------MSAR------T--ASWPVR-------ISAAVLIL
Mflv_2759|M.gilvum_PYR-GCK ------------MTTTDPQS------TRLSSWRLLALNPVTLISALVLIA
Mvan_3775|M.vanbaalenii_PYR-1 ------------MTTTDPND------TRLSSWRLLAGNPVTLVSALVLVA
TH_2705|M.thermoresistible__bu ------------MTADDLTGGEPDAVSRVAAWRLLAANPVTLLSAALLAL
MLBr_01123|M.leprae_Br4923 ----------MTLTEGLSISEKTNFASRKTLVLRRFAHNRTASVSLMLLV
: :
Mb3688c|M.bovis_AF2122/97 ILVVAAFPSLFT-AADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVY
Rv3664c|M.tuberculosis_H37Rv ILVVAAFPSLFT-AADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVY
MMAR_5152|M.marinum_M ILVVAAFPSLFT-GIDPSYADPSQSMLSPSTAHWFGTDLQGHDIYARTVY
MUL_4238|M.ulcerans_Agy99 ILFVAAFPSLFT-GIDPSYADPSQSMLSPSTAHWFGTDLQGHDIYARTVY
MAB_0428|M.abscessus_ATCC_1997 LVLMALAPQLFTFGKDPRACDLYQARKGISAAHWLGTDLQGCDYYANVVY
MSMEG_4387|M.smegmatis_MC2_155 MLAWAVAPGAFT-SGTPYDTDIENPLKPPSFEHWFGTDASGRDIFTRVVY
MAV_3419|M.avium_104 TAAWAAAPGLFT-DRNPLKGRPVDKFQPPSAAHWFGTDHLGRDVLTRVIY
Mflv_2759|M.gilvum_PYR-GCK VAVVAVTANWII-PYGVNDVDVPNALAPPSGSHWFGTDELGRDVLSRVLV
Mvan_3775|M.vanbaalenii_PYR-1 VTVVAVTANWLA-PYGVNDVDVPNALAPPSASHWFGTDELGRDVLSRVLV
TH_2705|M.thermoresistible__bu LVAVAVTAPWLA-PYGVNDINVPEALQPPSAAHWFGTDELGRDVLSRVLV
MLBr_01123|M.leprae_Br4923 LLFVACYLLPSLLPYSYDDLDFNALLQPPNTRHWLGTNALGQDLLAQTLR
* . **:**: * * :..:
Mb3688c|M.bovis_AF2122/97 GARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLP-
Rv3664c|M.tuberculosis_H37Rv GARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLP-
MMAR_5152|M.marinum_M GARASVVVGLGATAAAFIAGVTLGALAGYYGGWLDAVVSRITDIFFGLP-
MUL_4238|M.ulcerans_Agy99 GARASVVVGLGATAAAFIAGVTLGALAGYYGGWLDAVVSRITDIFFGLP-
MAB_0428|M.abscessus_ATCC_1997 GARVSLTIGLIAMVGVLIIGVIVGALAGYFGGIADSALSRLTDVFYGIP-
MSMEG_4387|M.smegmatis_MC2_155 GTQSSLAIGVGATALALLAAIILGFGAGLGGRFADGAISRFIEVVLSIP-
MAV_3419|M.avium_104 GTSHTVATAGLAVAVGLLLGSSVGIAAGVSGPVVDAVAMRASDVLLALP-
Mflv_2759|M.gilvum_PYR-GCK ATQASMRIAVVSVAFAVIVGVAVGVIAGYRGGWLDTVLMRVVDVMFAFP-
Mvan_3775|M.vanbaalenii_PYR-1 AVQASMRIAAVSVALAMVVGVAVGVVAGYRGGWLDTVLMRVVDVMFAFP-
TH_2705|M.thermoresistible__bu AIQASLRVAAVSVAFAAAVGILVGLLAGYRGGWLDTVLMRLVDVLFAFP-
MLBr_01123|M.leprae_Br4923 GMQKSMLIGVCVALISTSIAATVGSIAGYFGRWRDRVLMWVVDLLLVVPS
. :: . . :* ** * * . ::. .*
Mb3688c|M.bovis_AF2122/97 LLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVL
Rv3664c|M.tuberculosis_H37Rv LLLAAIVLMQVMHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVL
MMAR_5152|M.marinum_M LLLAAIVLMQVMHHRTVWTVIAILALFGWPQIARIARSSVLEVRGSDFVL
MUL_4238|M.ulcerans_Agy99 LLLAAIVLMQVMHHRTVWTVIAILALFGWPQIARIARSSVLEVRGSDFVL
MAB_0428|M.abscessus_ATCC_1997 TILGGMILLSVVGHRTVWSVAGALIAFGWMTSMRLVRSSVMSIKQSDYVQ
MSMEG_4387|M.smegmatis_MC2_155 GLLLALVFIAMFGPGVVTQILAVAIGS-AVGYARMVRGQVIAVKDSGYVH
MAV_3419|M.avium_104 GFLTSVWIVTAYGPGPLSVGIGVGIGS-IAVFARVFRAEVLRVRALDYVE
Mflv_2759|M.gilvum_PYR-GCK VLLLALAVVAILGPGVTTTILAIGIVY-TPIFARVARASTLGVRTEPYVS
Mvan_3775|M.vanbaalenii_PYR-1 VLLLALAVVAILGPGVTTTILAIAIVY-TPIFARVARASTLGVRTEPYVS
TH_2705|M.thermoresistible__bu VLLLALAIVAILGPGMTTTMLAIGIVF-TPIFARVARAGTLGVRVEPFVQ
MLBr_01123|M.leprae_Br4923 FVLIAIMSPQTKSSDNIMLLVLLLAGFGWMVSSRMVRGMTMSLRKSEFIR
.* .: *: *. .: :: ::
Mb3688c|M.bovis_AF2122/97 AAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGL
Rv3664c|M.tuberculosis_H37Rv AAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLGVGL
MMAR_5152|M.marinum_M AAKALGMSRFQILLRHALPNAIGPVIAVATVALGIFIVTEATLSYLGVGL
MUL_4238|M.ulcerans_Agy99 AAKALGMSRFQILLRHALPNAIGPVIAVATVALGIFIVTEATLSYLGVGL
MAB_0428|M.abscessus_ATCC_1997 AAIALGAPTWRILLRHILPNALAPVLVYATIAVGSFIAAEATLTYMGIGL
MSMEG_4387|M.smegmatis_MC2_155 AATALGHSRGQIIRRHVFPNAMRPLVVLGTMGIGQSIVWASSLSFLGLGV
MAV_3419|M.avium_104 AAFLSGETRWSVIRRHIVPNAAGAVIALAVIDLSGAILLISALGYLGYSA
Mflv_2759|M.gilvum_PYR-GCK VSRAMGAGDLYILRRHILPNIAGPLIVQTSLSLAFAILSEAALSFLGLGI
Mvan_3775|M.vanbaalenii_PYR-1 ASRAMGTGDLYILRRHILPNIAGPLIVQTSLSLAFAILSEAALSFLGLGI
TH_2705|M.thermoresistible__bu ASHTMGTGHAYILRRHILPNIAAPLIVQTSLSLAFAILAEAALSFLGLGI
MLBr_01123|M.leprae_Br4923 AGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLGFGI
.. * :: * .** :: : :. * : * ::* .
Mb3688c|M.bovis_AF2122/97 PTSVVSWGGDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALRDAL
Rv3664c|M.tuberculosis_H37Rv PTSVVSWGGDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALRDAL
MMAR_5152|M.marinum_M PPTVVSWGGDINVAQMRLRAGSPILFYPAGALAVTVLAFMMMGDALRDAL
MUL_4238|M.ulcerans_Agy99 PPTVVSWGDDINVAQMRLRAGSPILFYPAGALAVTVLAFMMMGDALRDAL
MAB_0428|M.abscessus_ATCC_1997 ELPEISWGLQINDGQSRFASTPRLVIVPALFLSAAVLGFIMVGDALRDAL
MSMEG_4387|M.smegmatis_MC2_155 APPAPEWGAMLNAGRDFVSTAWWLELFPGLAIVGCTLAVTVVGRYLQQRL
MAV_3419|M.avium_104 PPPTPEWGLLVAEGRRYLATAWWLSTLPGAVVLSVILALGVLSR--RALT
Mflv_2759|M.gilvum_PYR-GCK QPPQPSLGRMIFDSQGFVTMAWWMAVFPGAAIFLIVLAFNLFGDGLRDVL
Mvan_3775|M.vanbaalenii_PYR-1 QPPQPSLGRMIFDSQGFVTMAWWMAVFPGAAIFVIVLAFNLLGDGLRDVL
TH_2705|M.thermoresistible__bu QPPEPSLGRMIFDSQGFVTLAWWMAVFPGAAIVAAVLACNLFGDGLRDVL
MLBr_01123|M.leprae_Br4923 KPPDVSLGTLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLRDAF
. . * : . : *. : : : . :
Mb3688c|M.bovis_AF2122/97 DPASRAWRA-------------------
Rv3664c|M.tuberculosis_H37Rv DPASRAWRA-------------------
MMAR_5152|M.marinum_M DPASRAWRA-------------------
MUL_4238|M.ulcerans_Agy99 DPASRAWRA-------------------
MAB_0428|M.abscessus_ATCC_1997 DPRRR-----------------------
MSMEG_4387|M.smegmatis_MC2_155 EGRLS-----------------------
MAV_3419|M.avium_104 SHRI------------------------
Mflv_2759|M.gilvum_PYR-GCK DPKQRTTIEARRLQR-------------
Mvan_3775|M.vanbaalenii_PYR-1 DPKQRTTVEARRRER-------------
TH_2705|M.thermoresistible__bu DPKQRTVIETQRRARQRPGRGRRAGSAW
MLBr_01123|M.leprae_Br4923 DPVSKHLRR-------------------
.