For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_4099 (-)

annotation: ABC transporter permease protein
coordinates: 4177170 - 4178078
length: 302

SLIVDTSAPVATPEAPEPGAATSPVRKTLRWVGSHRSLVVSLTIFGVALAWALVPGLFTQYDPISIDNSQ
KLLPPSAEHWFGTDLLGRDLYARIVYGARASLLGASMAVAVAVVVGSLLGAVAGWFGGFGDTVAMRFVDV
LLSIPGFLLAIAIVVLYTARTGSAGLVPAAVAVGLTSSATFARLIRSEVLRVRASNYVEAAITSGATTVT
ILRRHVIPNSLAPTVSLIAVQLGIAIIWIASLSFLGLGAQPPEPEWGLLVSDGRKYIATRGWLTLFPALT
IIAVVLATNNISRHLSNRATR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_4099--100% (302)ABC transporter permease protein
M. smegmatis MC2 155MSMEG_2845-4e-6445.70% (256) ABC transporter permease protein
M. smegmatis MC2 155MSMEG_4387-1e-5940.42% (287) ABC transporter permease protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3688cdppC2e-4140.32% (253) peptide ABC transporter transmembrane protein
M. gilvum PYR-GCKMflv_2759-2e-4738.34% (253) binding-protein-dependent transport systems inner membrane
M. tuberculosis H37RvRv3664cdppC2e-4140.32% (253) peptide ABC transporter transmembrane protein
M. leprae Br4923MLBr_01123-9e-3129.21% (267) putative binding-protein dependent transport protein
M. abscessus ATCC 19977MAB_0428-3e-4336.90% (290) peptide ABC transporter DppC
M. marinum MMMAR_5152dppC3e-4238.80% (250) dipeptide-transport integral membrane protein ABC
M. avium 104MAV_3419-2e-6145.28% (254) ABC transporter permease protein
M. thermoresistible (build 8)TH_2705-2e-4938.46% (273) PUTATIVE binding-protein-dependent transport systems inner
M. ulcerans Agy99MUL_4238dppC3e-4238.80% (250) dipeptide-transport integral membrane protein ABC
M. vanbaalenii PYR-1Mvan_3775-1e-4739.29% (252) binding-protein-dependent transport systems inner membrane

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2759|M.gilvum_PYR-GCK          --------MTTTD---PQS------TRLSSWRLLALNPVTLISALVLIAV
Mvan_3775|M.vanbaalenii_PYR-1       --------MTTTD---PND------TRLSSWRLLAGNPVTLVSALVLVAV
TH_2705|M.thermoresistible__bu      --------MTADD---LTGGEPDAVSRVAAWRLLAANPVTLLSAALLALL
MLBr_01123|M.leprae_Br4923          --------MTLTEGLSISEKTNFASRKTLVLRRFAHNRTASVSLMLLVLL
MSMEG_4099|M.smegmatis_MC2_155      MSLIVDTSAPVATPEAPEP--GAATSPVRKTLRWVGSHRSLVVSLTIFGV
MAV_3419|M.avium_104                ------MSARTAS------------WPVR-------------ISAAVLIL
Mb3688c|M.bovis_AF2122/97           -----------------------------------------MIAAALILL
Rv3664c|M.tuberculosis_H37Rv        -----------------------------------------MIAAALILL
MMAR_5152|M.marinum_M               --------------------MAELGGFWFDILGGLRRRPKFVIAAVLIVF
MUL_4238|M.ulcerans_Agy99           --------------------MAELRGFWFDILGGLRRRPKFVIAAVLIVF
MAB_0428|M.abscessus_ATCC_1997      MSDPVNTPGPVSGPDATAESLAEQADLWGNAWKYLRRSGFFITGSILLTI
                                                                                  :  .

Mflv_2759|M.gilvum_PYR-GCK          AVVAVTANWIIP--YGVNDVDVPNALAPPSGSHWFGTDELGRDVLSRVLV
Mvan_3775|M.vanbaalenii_PYR-1       TVVAVTANWLAP--YGVNDVDVPNALAPPSASHWFGTDELGRDVLSRVLV
TH_2705|M.thermoresistible__bu      VAVAVTAPWLAP--YGVNDINVPEALQPPSAAHWFGTDELGRDVLSRVLV
MLBr_01123|M.leprae_Br4923          FVACYLLPSLLP--YSYDDLDFNALLQPPNTRHWLGTNALGQDLLAQTLR
MSMEG_4099|M.smegmatis_MC2_155      ALAWALVPGLFT-QYDPISIDNSQKLLPPSAEHWFGTDLLGRDLYARIVY
MAV_3419|M.avium_104                TAAWAAAPGLFT-DRNPLKGRPVDKFQPPSAAHWFGTDHLGRDVLTRVIY
Mb3688c|M.bovis_AF2122/97           ILVVAAFPSLFT-AADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVY
Rv3664c|M.tuberculosis_H37Rv        ILVVAAFPSLFT-AADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVY
MMAR_5152|M.marinum_M               ILVVAAFPSLFT-GIDPSYADPSQSMLSPSTAHWFGTDLQGHDIYARTVY
MUL_4238|M.ulcerans_Agy99           ILFVAAFPSLFT-GIDPSYADPSQSMLSPSTAHWFGTDLQGHDIYARTVY
MAB_0428|M.abscessus_ATCC_1997      LVLMALAPQLFTFGKDPRACDLYQARKGISAAHWLGTDLQGCDYYANVVY
                                             : .   .             .  **:**:  * *  :. : 

Mflv_2759|M.gilvum_PYR-GCK          ATQASMRIAVVSVAFAVIVGVAVGVIAGYRGGWLDTVLMRVVDVMFAFP-
Mvan_3775|M.vanbaalenii_PYR-1       AVQASMRIAAVSVALAMVVGVAVGVVAGYRGGWLDTVLMRVVDVMFAFP-
TH_2705|M.thermoresistible__bu      AIQASLRVAAVSVAFAAAVGILVGLLAGYRGGWLDTVLMRLVDVLFAFP-
MLBr_01123|M.leprae_Br4923          GMQKSMLIGVCVALISTSIAATVGSIAGYFGRWRDRVLMWVVDLLLVVPS
MSMEG_4099|M.smegmatis_MC2_155      GARASLLGASMAVAVAVVVGSLLGAVAGWFGGFGDTVAMRFVDVLLSIPG
MAV_3419|M.avium_104                GTSHTVATAGLAVAVGLLLGSSVGIAAGVSGPVVDAVAMRASDVLLALPG
Mb3688c|M.bovis_AF2122/97           GARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPL
Rv3664c|M.tuberculosis_H37Rv        GARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPL
MMAR_5152|M.marinum_M               GARASVVVGLGATAAAFIAGVTLGALAGYYGGWLDAVVSRITDIFFGLPL
MUL_4238|M.ulcerans_Agy99           GARASVVVGLGATAAAFIAGVTLGALAGYYGGWLDAVVSRITDIFFGLPL
MAB_0428|M.abscessus_ATCC_1997      GARVSLTIGLIAMVGVLIIGVIVGALAGYFGGIADSALSRLTDVFYGIPT
                                    .   ::  .          .  :*  **  *   * .     *::  .* 

Mflv_2759|M.gilvum_PYR-GCK          -VLLLALAVVAILGP---GVTTTILAIGIVYTPIFARVARASTLGVRTEP
Mvan_3775|M.vanbaalenii_PYR-1       -VLLLALAVVAILGP---GVTTTILAIAIVYTPIFARVARASTLGVRTEP
TH_2705|M.thermoresistible__bu      -VLLLALAIVAILGP---GMTTTMLAIGIVFTPIFARVARAGTLGVRVEP
MLBr_01123|M.leprae_Br4923          FVLIAIMSPQTKSSD---NIMLLVLLLAGFGWMVSSRMVRGMTMSLRKSE
MSMEG_4099|M.smegmatis_MC2_155      FLLAIAIVVLYTARTGSAGLVPAAVAVGLTSSATFARLIRSEVLRVRASN
MAV_3419|M.avium_104                FLTSVWIVTAYGP-----GPLSVGIGVGIGSIAVFARVFRAEVLRVRALD
Mb3688c|M.bovis_AF2122/97           LLAAIVLMQVMHHR----TVWTVIAILALFGWPQVARIARGAVLEVRASD
Rv3664c|M.tuberculosis_H37Rv        LLAAIVLMQVMHHR----TVWTVIAILALFGWPQVARIARGAVLEVRASD
MMAR_5152|M.marinum_M               LLAAIVLMQVMHHR----TVWTVIAILALFGWPQIARIARSSVLEVRGSD
MUL_4238|M.ulcerans_Agy99           LLAAIVLMQVMHHR----TVWTVIAILALFGWPQIARIARSSVLEVRGSD
MAB_0428|M.abscessus_ATCC_1997      ILGGMILLSVVGHR----TVWSVAGALIAFGWMTSMRLVRSSVMSIKQSD
                                     :    :                   :         *: *. .: ::   

Mflv_2759|M.gilvum_PYR-GCK          YVSVSRAMGAGDLYILRRHILPNIAGPLIVQTSLSLAFAILSEAALSFLG
Mvan_3775|M.vanbaalenii_PYR-1       YVSASRAMGTGDLYILRRHILPNIAGPLIVQTSLSLAFAILSEAALSFLG
TH_2705|M.thermoresistible__bu      FVQASHTMGTGHAYILRRHILPNIAAPLIVQTSLSLAFAILAEAALSFLG
MLBr_01123|M.leprae_Br4923          FIRAGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLG
MSMEG_4099|M.smegmatis_MC2_155      YVEAAITSGATTVTILRRHVIPNSLAPTVSLIAVQLGIAIIWIASLSFLG
MAV_3419|M.avium_104                YVEAAFLSGETRWSVIRRHIVPNAAGAVIALAVIDLSGAILLISALGYLG
Mb3688c|M.bovis_AF2122/97           YVLAAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLG
Rv3664c|M.tuberculosis_H37Rv        YVLAAKALGLNRFQILLRHALPNAVGPVIAVATVALGIFIVTEATLSYLG
MMAR_5152|M.marinum_M               FVLAAKALGMSRFQILLRHALPNAIGPVIAVATVALGIFIVTEATLSYLG
MUL_4238|M.ulcerans_Agy99           FVLAAKALGMSRFQILLRHALPNAIGPVIAVATVALGIFIVTEATLSYLG
MAB_0428|M.abscessus_ATCC_1997      YVQAAIALGAPTWRILLRHILPNALAPVLVYATIAVGSFIAAEATLTYMG
                                    :: ..   *     ::  * :**  .  :    : :.  *   : * ::*

Mflv_2759|M.gilvum_PYR-GCK          LGIQPPQPSLGRMIFDSQGFVTMAWWMAVFPGAAIFLIVLAFNLFGDGLR
Mvan_3775|M.vanbaalenii_PYR-1       LGIQPPQPSLGRMIFDSQGFVTMAWWMAVFPGAAIFVIVLAFNLLGDGLR
TH_2705|M.thermoresistible__bu      LGIQPPEPSLGRMIFDSQGFVTLAWWMAVFPGAAIVAAVLACNLFGDGLR
MLBr_01123|M.leprae_Br4923          FGIKPPDVSLGTLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLR
MSMEG_4099|M.smegmatis_MC2_155      LGAQPPEPEWGLLVSDGRKYIATRGWLTLFPALTIIAVVLATNNISRHLS
MAV_3419|M.avium_104                YSAPPPTPEWGLLVAEGRRYLATAWWLSTLPGAVVLSVILALGVLSRRAL
Mb3688c|M.bovis_AF2122/97           VGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALR
Rv3664c|M.tuberculosis_H37Rv        VGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGALAITVLAFMMMGDALR
MMAR_5152|M.marinum_M               VGLPPTVVSWGGDINVAQMRLRAGSPILFYPAGALAVTVLAFMMMGDALR
MUL_4238|M.ulcerans_Agy99           VGLPPTVVSWGDDINVAQMRLRAGSPILFYPAGALAVTVLAFMMMGDALR
MAB_0428|M.abscessus_ATCC_1997      IGLELPEISWGLQINDGQSRFASTPRLVIVPALFLSAAVLGFIMVGDALR
                                     .   .  . *  :  .         :   *.  :   ::     .    

Mflv_2759|M.gilvum_PYR-GCK          DVLDPKQRTTIEARRLQR-------------
Mvan_3775|M.vanbaalenii_PYR-1       DVLDPKQRTTVEARRRER-------------
TH_2705|M.thermoresistible__bu      DVLDPKQRTVIETQRRARQRPGRGRRAGSAW
MLBr_01123|M.leprae_Br4923          DAFDPVSKHLRR-------------------
MSMEG_4099|M.smegmatis_MC2_155      NRATR--------------------------
MAV_3419|M.avium_104                TSHRI--------------------------
Mb3688c|M.bovis_AF2122/97           DALDPASRAWRA-------------------
Rv3664c|M.tuberculosis_H37Rv        DALDPASRAWRA-------------------
MMAR_5152|M.marinum_M               DALDPASRAWRA-------------------
MUL_4238|M.ulcerans_Agy99           DALDPASRAWRA-------------------
MAB_0428|M.abscessus_ATCC_1997      DALDPRRR-----------------------