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M. smegmatis MC2 155 MSMEG_0831 (-)

annotation: short chain dehydrogenase
coordinates: 917379 - 918095
length: 238

MTSRRVLISGASKGIGRALADRLAADGHQPVGLARTPTPDFPGKLFQVDLSDRAATDDALAAVLADGPIE
AVVNNVAGARFARIGEIDLDDLFSTYDMTMRIAVQVTQAVLPGMLDAGWGRVVNVTSLTTQGTPLRTPYA
AAKAALETATKTWAGELATSGITVNAVAPGPTETEMYRERSPQGSELERRFLENIPMRRVGQPREIAHVI
ASLLHDDAGYITGQIVRVDGGGSVSGAW
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_0831--100% (238)short chain dehydrogenase
M. smegmatis MC2 155MSMEG_6538-2e-3838.72% (235) 3-oxoacyl-(acyl-carrier-protein) reductase, putative
M. smegmatis MC2 155MSMEG_4800-5e-3839.66% (232) 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1519fabG12e-2735.59% (236) 3-oxoacyl-
M. gilvum PYR-GCKMflv_2501-1e-3838.20% (233) short-chain dehydrogenase/reductase SDR
M. tuberculosis H37RvRv1483fabG12e-2735.59% (236) 3-oxoacyl-
M. leprae Br4923MLBr_01807fabG14e-2633.48% (233) 3-oxoacyl-
M. abscessus ATCC 19977MAB_0952-6e-2634.82% (247) short chain dehydrogenase
M. marinum MMMAR_4715-1e-3841.63% (233) 3-oxoacyl-
M. avium 104MAV_2709-1e-9068.51% (235) short chain dehydrogenase
M. thermoresistible (build 8)TH_3102-1e-3738.36% (232) PUTATIVE short-chain dehydrogenase/reductase SDR
M. ulcerans Agy99MUL_0315fabG26e-4042.36% (229) 3-oxoacyl-
M. vanbaalenii PYR-1Mvan_4157-2e-3938.10% (231) short-chain dehydrogenase/reductase SDR

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_0831|M.smegmatis_MC2_155      MT------------------SRRVLISGASKGIGRALADRLAADGHQPVG
MAV_2709|M.avium_104                MP------------------SRRVLITGASRGIGRAVADRLAEGGHEPIG
Mflv_2501|M.gilvum_PYR-GCK          MK--------------------NAVVTGGASGIGAAVVERLRADGLQVAT
Mvan_4157|M.vanbaalenii_PYR-1       MK--------------------NAVVTGGASGIGAAIAERLRADGMRVAT
TH_3102|M.thermoresistible__bu      LK--------------------NAVVTGGGSGIGQAVAARLRADGYHVAT
MMAR_4715|M.marinum_M               MK--------------------TAVVTGGASGIGLAIARRLRADGIDVAT
MUL_0315|M.ulcerans_Agy99           MRPDSSPS----------WCTITSVVTGGASGIGLAIARRLSADGTDVAT
Mb1519|M.bovis_AF2122/97            MTATATEG------AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAV
Rv1483|M.tuberculosis_H37Rv         MTATATEG------AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAV
MLBr_01807|M.leprae_Br4923          MTDAAAKVSAAPGRGKPAFVSRSILVTGGNRGIGLAVARRLVADGHRVAV
MAB_0952|M.abscessus_ATCC_1997      MVVESAEPAER--KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAV
                                    :                       :::*.  *** .:.  :   *     

MSMEG_0831|M.smegmatis_MC2_155      LARTPT------------PDFPGKLFQVDLSDRAATDDALAAVLADG-PI
MAV_2709|M.avium_104                LARSAP------------EDFPGEFYEVDLADPYATAATLDKIVGHA-AV
Mflv_2501|M.gilvum_PYR-GCK          IDLNP--------------GDAKFSYAADVTDRSAVDAALDEIRAELGPV
Mvan_4157|M.vanbaalenii_PYR-1       IDLNP--------------GDEKFSYAADVTDRAAVDAVLSEIHTELGPV
TH_3102|M.thermoresistible__bu      IDLKP--------------GDDEFSHAADVTDRAQVDAAFDAIRTQLGPV
MMAR_4715|M.marinum_M               LDLKT--------------PDGELAFSADVTNRSQVDAALTAIRQRLGPV
MUL_0315|M.ulcerans_Agy99           LDLKT--------------PDGGLAFSADVTNRSQVDAALAAIRQRLGPV
Mb1519|M.bovis_AF2122/97            THRGSG------------APKGLFGVECDVTDSDAVDRAFTAVEEHQGPV
Rv1483|M.tuberculosis_H37Rv         THRGSG------------APKGLFGVECDVTDSDAVDRAFTAVEEHQGPV
MLBr_01807|M.leprae_Br4923          THRASV------------VPDWFFGVECDVTDNDAIGAAFKAVEEHQGPV
MAB_0952|M.abscessus_ATCC_1997      AARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGAL
                                        .                       *:::      .   :     .:

MSMEG_0831|M.smegmatis_MC2_155      EAVVNNVAGARFARIGEIDLDDLFSTYDMTMRIAVQVTQAVLPGMLDAGW
MAV_2709|M.avium_104                HAVVNNVGFARFGRLGSIELDHLFDTYDLNVRAAVQVVQAALPGMLDAEW
Mflv_2501|M.gilvum_PYR-GCK          TVLVNAAGLDRFKKFLDLSFEEWQKVVDVNLNGVFHCTQAVLPDMIEAGW
Mvan_4157|M.vanbaalenii_PYR-1       TVLVNAAGLDRFKKFLDLTFDEWQKVVDVNLNGVFHCTQAVLPDMIEAGW
TH_3102|M.thermoresistible__bu      TILVNAAGLDLFRRFTDISFEDWERVINVNLHGVFHCIQAVLPDMIEAGW
MMAR_4715|M.marinum_M               TILVNAAGLDGFKRFSNITFEDWQRVIDVNLNGVFHTIQAVLPDMVAAGW
MUL_0315|M.ulcerans_Agy99           TILVNAAGLDGFKRFSNITFEDWQRVIDVNLNGVFHTIQAVLPDMVAAGW
Mb1519|M.bovis_AF2122/97            EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKF
Rv1483|M.tuberculosis_H37Rv         EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKF
MLBr_01807|M.leprae_Br4923          EVLVANAGITSDMLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIKQRF
MAB_0952|M.abscessus_ATCC_1997      DVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR
                                      :   ..      :  :  :.   . : .:  ..   :     :     

MSMEG_0831|M.smegmatis_MC2_155      GRVVNVTSL-TTQ-GTPLRTPYAAAKAALETATKTWAGELATSGITVNAV
MAV_2709|M.avium_104                GRIVNVTSL-TTL-GTPERTPYAAAKAALEACTRIWAGELASAGITVNAV
Mflv_2501|M.gilvum_PYR-GCK          GRIVNISSS-STHSGQPYMSPYVAAKSAVNGLTKSLALEYGPAGITVNAV
Mvan_4157|M.vanbaalenii_PYR-1       GRIVNISSS-STHSGQPYMSPYVAAKSAVNGLTKSLALEYGPDGITVNAV
TH_3102|M.thermoresistible__bu      GRIVNISSS-STHSGAPYMAPYVAAKSGVNGLTKTLALEYGPAGITVNAV
MMAR_4715|M.marinum_M               GRIVNISSS-STHSGTPYMTHYVAAKSAVNGLTKALALEYGPSGITVNAV
MUL_0315|M.ulcerans_Agy99           GRIVNISSS-STHSGTPYMTHYVAAKSAVNGLTKALALEYGPSGITVNAV
Mb1519|M.bovis_AF2122/97            GRMIFIGSV-SGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVV
Rv1483|M.tuberculosis_H37Rv         GRMIFIGSV-SGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVV
MLBr_01807|M.leprae_Br4923          GRYIFMGSV-VGLSGVPGQANYAASKSGLIGMARSLARELGSRSITANVV
MAB_0952|M.abscessus_ATCC_1997      GRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAI
                                    ** :   *      *    : * *:*:.     :  * * .  .:*.*.:

MSMEG_0831|M.smegmatis_MC2_155      APGPTETEMYRERSPQGS-ELERRFLENIPMRRVGQPREIAHVIASLLHD
MAV_2709|M.avium_104                APGPTETDMYRERSPVGS-EREARFLQSIPLHRVARPREIAHAICFLLDE
Mflv_2501|M.gilvum_PYR-GCK          PPGFIDTPMLRKAEQRGFLGDTEQQIQQTPVRRMGRPEDIAAACAFFISE
Mvan_4157|M.vanbaalenii_PYR-1       PPGFIDTPMLRKAEQRGFLGDTQKQIEQTPVRRMGRPEDIAAACSFLISE
TH_3102|M.thermoresistible__bu      PPGFIDTPMLRAAAAKGYLGDIDKTIEATPVRRMGKPEDIAAACAFLISE
MMAR_4715|M.marinum_M               PPGFIDTPMLRNAAAQGHLGDIEQNIARTPVRRIGKPEDIAAACAFLVSE
MUL_0315|M.ulcerans_Agy99           PPGFIDTPMLRNAAAQGHLGDIEQNIARTPVRRIGKPEDIAAACAFLVSE
Mb1519|M.bovis_AF2122/97            APGYIDTDMTRALDER----IQQGALQFIPAKRVGTPAEVAGVVSFLASE
Rv1483|M.tuberculosis_H37Rv         APGYIDTDMTRALDER----IQQGALQFIPAKRVGTPAEVAGVVSFLASE
MLBr_01807|M.leprae_Br4923          APGFIDTEMTRAMDSK----YQEAALQAIPLGRIGAVEEIAGAVSFLASE
MAB_0952|M.abscessus_ATCC_1997      LPGNILTEGLVDMGEE----YISGMARSIPMGMLGSPVDIGHLAAFLATD
                                     **   *                      *   :.   ::.   . :  :

MSMEG_0831|M.smegmatis_MC2_155      DAGYITGQIVRVDGGGSVSGAW-----
MAV_2709|M.avium_104                DAGYITGQILRVDGGGSIAA-------
Mflv_2501|M.gilvum_PYR-GCK          EAGYITGQILGVNGGRNT---------
Mvan_4157|M.vanbaalenii_PYR-1       EAGYITGQILGVNGGRNT---------
TH_3102|M.thermoresistible__bu      EAGYITGQILGVNGGRNT---------
MMAR_4715|M.marinum_M               EAGYITGQILGVNGGRNT---------
MUL_0315|M.ulcerans_Agy99           EAGYITGQILGVNGGRNT---------
Mb1519|M.bovis_AF2122/97            DASYISGAVIPVDGGMGMGH-------
Rv1483|M.tuberculosis_H37Rv         DASYISGAVIPVDGGMGMGH-------
MLBr_01807|M.leprae_Br4923          DAGYISGAVIPVDGGLGMGH-------
MAB_0952|M.abscessus_ATCC_1997      EAGYITGQAIVVDGGQVLPESPDAVNP
                                    :*.**:*  : *:**