For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
EVVGIDKEYPAATGPIQILRGLSLRADRGEFVSIVGPSGCGKSTLFNIITGLVPPTAGSVLVNGEDVTGS TSRHIGYVLQKDLLFPWRTVLENVVLGLEVRGVRKKDARTRARSLFATYKLEGYEDKYPSDLSGGMKQRA ALMRTMVTDPDIILMDEAYKALDYPLKIALESELLETARTTGKTVVAVTHDIEEAVTMSDRVYVLKARPG EVVSEFPIDLGTTSTDINERRLAPRFNEFYEKIWRGIGQKPGAA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0488 | - | - | 100% (255) | ABC transporter ATP-binding protein |
M. smegmatis MC2 155 | MSMEG_2459 | - | 2e-49 | 41.94% (248) | transporter ATPase |
M. smegmatis MC2 155 | MSMEG_2502 | - | 9e-49 | 43.80% (242) | transporter ATPase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2419c | cysA1 | 8e-32 | 39.11% (179) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. gilvum PYR-GCK | Mflv_0722 | - | 1e-35 | 32.79% (244) | ABC transporter related |
M. tuberculosis H37Rv | Rv2397c | cysA1 | 9e-32 | 39.11% (179) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
M. leprae Br4923 | MLBr_01424 | - | 2e-31 | 37.31% (201) | putative binding-protein-dependent transport protein |
M. abscessus ATCC 19977 | MAB_2178 | - | 3e-37 | 33.73% (249) | ABC transporter ATP-binding protein |
M. marinum M | MMAR_3011 | - | 4e-34 | 40.20% (204) | sugar-transport ATP-binding protein ABC transporter |
M. avium 104 | MAV_3398 | - | 2e-36 | 40.58% (207) | ABC transporter ATP-binding protein |
M. thermoresistible (build 8) | TH_4520 | - | 1e-35 | 35.81% (229) | PUTATIVE osmoprotectant (glycine |
M. ulcerans Agy99 | MUL_2252 | - | 4e-34 | 40.20% (204) | sugar-transport ATP-binding protein ABC transporter |
M. vanbaalenii PYR-1 | Mvan_0123 | - | 1e-37 | 33.06% (248) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0722|M.gilvum_PYR-GCK MSSQSDTEPVAPQRRSGAIQIRSVSHRYGQGRDEVTALGPVDLTVEPGSF Mvan_0123|M.vanbaalenii_PYR-1 MPSTND----------GAIRIDSVSHHYGSGGAEVTALGPVDLTVDPGSF MAB_2178|M.abscessus_ATCC_1997 MPLVDEAETAVQERDTGSIRISGVTHSYGSGAGKTTALGPVDLTVEPGTF MAV_3398|M.avium_104 MT-------------AMRLELDRVRLSYN-GPAVINELS---LVVRPGEI TH_4520|M.thermoresistible__bu ---VSEPTSDLQSGGGARILLDGVTKRYD--PKSPPAVDNITMEIPAGEI Mb2419c|M.bovis_AF2122/97 --------------MTYAIVVADATKRYG----DFVALDHVDFVVPTGSL Rv2397c|M.tuberculosis_H37Rv --------------MTYAIVVADATKRYG----DFVALDHVDFVVPTGSL MSMEG_0488|M.smegmatis_MC2_155 ------------------MEVVGIDKEYPAATGPIQILRGLSLRADRGEF MMAR_3011|M.marinum_M ---------------MASVSFEGATRRYP--GADRPAVDSLDLEVDDGEF MUL_2252|M.ulcerans_Agy99 ---------------MASVSFEGATRRYP--GADRPAVDSLDLVVDDGEF MLBr_01424|M.leprae_Br4923 ---------------MASVTFEQATRQFP--DTDRPALDRLDLDVDDGEF : . : : : * : Mflv_0722|M.gilvum_PYR-GCK LVLVGASGCGKSTLLRLLAGFESPTDGSVDVEGVPPTPGVTAG------V Mvan_0123|M.vanbaalenii_PYR-1 LVLVGASGCGKSTLLRLLAGFEEPSQGSVQVAGARPTPGVTAG------V MAB_2178|M.abscessus_ATCC_1997 LVLVGASGCGKSTLLRLLAGFESPSEGAVRVAGGVPTPGITSG------V MAV_3398|M.avium_104 LVLTGPSGCGKSTVLRALAGLLTPDGGRVLADG-VPVTGTSGDR----AM TH_4520|M.thermoresistible__bu VMLVGPSGCGKTTTMKMINRLIEPTSGRIFIGDDDVTERDADELRRHIGY Mb2419c|M.bovis_AF2122/97 TALLGPSGSGKSTLLRTIAGLDQPDTGTITINGRDVTRVPPQRRG--IGF Rv2397c|M.tuberculosis_H37Rv TALLGPSGSGKSTLLRTIAGLDQPDTGTITINGRDVTRVPPQRRG--IGF MSMEG_0488|M.smegmatis_MC2_155 VSIVGPSGCGKSTLFNIITGLVPPTAGSVLVNGEDVTGSTSRHIG----Y MMAR_3011|M.marinum_M VVLVGPSGCGKTTSLRMLAGLERVDAGRIRIAERDVTNVDPKSRD--VAM MUL_2252|M.ulcerans_Agy99 VVLVGPSGCGKTTSLRMLAGLEKVDAGRIRIAERDVTNVDPKSRD--VAM MLBr_01424|M.leprae_Br4923 VVVVGPSGCGKTTSLRMVAGLETLDSGCIRIGDRDVTHVDPKDRD--VAM : *.**.**:* :. : : * : . . Mflv_0722|M.gilvum_PYR-GCK VFQQPRLFPWRTVGGNVELALKYAKVPRDKRSERRDELLERVGLGG--TA Mvan_0123|M.vanbaalenii_PYR-1 VFQQPRLFPWRTVGGNVDMALRYAKVPRDKRIERREELLGRVGLEG--TA MAB_2178|M.abscessus_ATCC_1997 VFQQPRLFPWRTVGGNIELALKYAKVPRERWAQRRDQLLARVGLEG--TA MAV_3398|M.avium_104 VFQDNALLPWRTVRSNIELALRLRGQPRAGRRAAAERWISELGLAG--FG TH_4520|M.thermoresistible__bu VIQGAGLFPHYTVAENIAIVPRLLKWDRKRIAARVDELLDLVSLDPDEYR Mb2419c|M.bovis_AF2122/97 VFQHYAAFKHLTVRDNVAFGLKIRKRPKAEIKAKVDNLLQVVGLSG--FQ Rv2397c|M.tuberculosis_H37Rv VFQHYAAFKHLTVRDNVAFGLKIRKRPKAEIKAKVDNLLQVVGLSG--FQ MSMEG_0488|M.smegmatis_MC2_155 VLQKDLLFPWRTVLENVVLGLEVRGVRKKDARTRARSLFATYKLEG--YE MMAR_3011|M.marinum_M VFQNYALYPHMTVAQNMGFALKVAKTPKAEIRDRVLQAAKLLDLEA--YL MUL_2252|M.ulcerans_Agy99 VFQNYALYPHMTVAQNMGFALKVAKTPKAEIRDRVLQAAKLLDLEA--YL MLBr_01424|M.leprae_Br4923 VFQNYALYPHMTVAQNLGFALKISKISKAEIHDRILVVAKLLDLQP--YL *:* ** *: : . : * Mflv_0722|M.gilvum_PYR-GCK GRRIWEISGGQQQRVAIARALAAETPLFLLDEPFAALDALTRERLQEDVR Mvan_0123|M.vanbaalenii_PYR-1 DRRIWEISGGQQQRVAIARALAAETPLFLLDEPFAALDALTRERLQEDVR MAB_2178|M.abscessus_ATCC_1997 GRRIWEISGGQQQRVAIARALAAETPLFLLDEPFAALDALTRERLQEDVR MAV_3398|M.avium_104 DYLPKSLSGGMRQRVQLARGLAGAPRAVMMDEPFGALDTRTRAAMQRLLI TH_4520|M.thermoresistible__bu DRYPRELSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRQRLQDELL Mb2419c|M.bovis_AF2122/97 SRYPNQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREELRAWLR Rv2397c|M.tuberculosis_H37Rv SRYPNQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREELRAWLR MSMEG_0488|M.smegmatis_MC2_155 DKYPSDLSGGMKQRAALMRTMVTDPDIILMDEAYKALDYPLKIALESELL MMAR_3011|M.marinum_M DRKPKDLSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRVQTRNQIA MUL_2252|M.ulcerans_Agy99 DRKPKDLSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDTKLRVQTRNQIA MLBr_01424|M.leprae_Br4923 DRKPKDLSGGQRQRVAMGRAIVRRPQVFLMDEPLSNLDAKLRAQTRNQIA . .:*** :** : * :. . .::**. :* : . : Mflv_0722|M.gilvum_PYR-GCK QVSAESGRTTVFVTHSADEAAFLGSRIVVLTRRPGQIALDIPVDLPRTGV Mvan_0123|M.vanbaalenii_PYR-1 QVSAESGRTTVFVTHSADEAAFLGSRIVVLTRRPGQVALDIPVDLPRTGV MAB_2178|M.abscessus_ATCC_1997 QVSAESGRTTVFVTHSADEAAFLGSRIVVLTRRPGQVALDIPVDLPRTGI MAV_3398|M.avium_104 DTWRTHPTTIVFVTHDVDEALALGDRIVVLG-RAG--------EPPRASV TH_4520|M.thermoresistible__bu RLQDELRKTIVFVTHDFDEAVKLGDRIAILQQGSKVVQYDTPEEILTNPA Mb2419c|M.bovis_AF2122/97 RLHDEVHVTTVLVTHDQAEALDVADRIAVLH-KGRIEQVGSPTDVYDAPA Rv2397c|M.tuberculosis_H37Rv RLHDEVHVTTVLVTHDQAEALDVADRIAVLH-KGRIEQVGSPTDVYDAPA MSMEG_0488|M.smegmatis_MC2_155 ETARTTGKTVVAVTHDIEEAVTMSDRVYVLKARPGEVVSEFPIDLGTTST MMAR_3011|M.marinum_M GLQRQLGTTTVYVTHDQVEAMTMGDRVAVLC-DGVLQQCAAPRELYRRPD MUL_2252|M.ulcerans_Agy99 GLQRQLGTTTVYVTHDQVEAMTMGDRVAVLC-DGVLQQCAAPRELYRRPD MLBr_01424|M.leprae_Br4923 ELQCQLGTTTVYVTHDQVEAMTMGDRVAVLC-YGVLQQFATPRELYHKPE * * ***. ** :..*: :* : Mflv_0722|M.gilvum_PYR-GCK D-----------------PEELRRSPEYGELRAEVG----AAVRRAAA-- Mvan_0123|M.vanbaalenii_PYR-1 D-----------------PDELRRSPEYGQLRAEVG----RAVKAAAA-- MAB_2178|M.abscessus_ATCC_1997 D-----------------PDDLRRSPEYAQLRTEVG----RAVKAAAA-- MAV_3398|M.avium_104 E-----------------VPEPRSDRPHAELRAQII----DALNHAEAA- TH_4520|M.thermoresistible__bu DDFVKGFVGHGAALKQLTLTRVRDVDLHDAVTARAGGDPDEAIHAARAAD Mb2419c|M.bovis_AF2122/97 NAFVMSFLG---------AVSTLNGSLVRPHDIRVGRTPNMAVAAADGTA Rv2397c|M.tuberculosis_H37Rv NAFVMSFLG---------AVSTLNGSLVRPHDIRVGRTPNMAVAAADGTA MSMEG_0488|M.smegmatis_MC2_155 D-----------------INERRLAPRFNEFYEKIWRGIGQKPGAA---- MMAR_3011|M.marinum_M NVFVAGFIGSPAMN-MFILPIVDSSVLLGDWLIQLPREVTVPAPEVVVGV MUL_2252|M.ulcerans_Agy99 NVFVAGFIGSPAMN-MFILPIVDSSVLLGDWLIQLPREVTVPAPEVVVGV MLBr_01424|M.leprae_Br4923 NVFVAGFIGSPGMN-LVTLSIVDSSVLLGDWPIRIPREIASAASEVIIGV : . . Mflv_0722|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0123|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_2178|M.abscessus_ATCC_1997 -------------------------------------------------- MAV_3398|M.avium_104 -------------------------------------------------- TH_4520|M.thermoresistible__bu REHVIVLDAQNRPMRWMSLAELARPGALIRVSRDENLECVTLASTLTDAL Mb2419c|M.bovis_AF2122/97 GSTGVLRAVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREG Rv2397c|M.tuberculosis_H37Rv GSTGVLRAVVDRVVVLGFEVRVELTSAATGGAFTAQITRGDAEALALREG MSMEG_0488|M.smegmatis_MC2_155 -------------------------------------------------- MMAR_3011|M.marinum_M RPEHFEVGNLGVEMEIDVVEELGADAYLYGRIINGGAMIDQSVVARADGS MUL_2252|M.ulcerans_Agy99 RPEHFEVGNLGVEMEIDVVEELGADAYLYGRISNGGTMIDQSVVARADGS MLBr_01424|M.leprae_Br4923 RPEHFELGSLGVEVEIDMVEELGADAYLYGRIAGASKVTDQLVVARVDGR Mflv_0722|M.gilvum_PYR-GCK ------------------------------------------------ Mvan_0123|M.vanbaalenii_PYR-1 ------------------------------------------------ MAB_2178|M.abscessus_ATCC_1997 ------------------------------------------------ MAV_3398|M.avium_104 ------------------------------------------------ TH_4520|M.thermoresistible__bu DDMLTSSHGVVVVTGRRNTYQGVIRLETIMDAIADARGTAGSQGAGAP Mb2419c|M.bovis_AF2122/97 DTVYVRATRVPPIAGGVSGVDDAGVERVKVTST--------------- Rv2397c|M.tuberculosis_H37Rv DTVYVRATRVPPIAGGVSGVDDAGVERVKVTST--------------- MSMEG_0488|M.smegmatis_MC2_155 ------------------------------------------------ MMAR_3011|M.marinum_M NPPERGSRVRLYPQPAQLHFFTVDGRRIA------------------- MUL_2252|M.ulcerans_Agy99 NPPERGSRVRLYPQPAQLHFFTVDGRRIA------------------- MLBr_01424|M.leprae_Br4923 NPPAKGSRVRLYTEPGNVHFFGVDGHRIS-------------------