For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
GDTKLAAAAATPIIAFGLRTMTIMSNLTGVEGPEHGDRYGQGAEAFSGVSSGLDGTRSPDSWEGSSSDAY SDRNREQKERAALMAETDRVVKEVLDKEAGEIEDTRRQIDHQMTELTWLIPAAIAAKFWNAPPGSGEIAS QIIQWGGVAKTLPIATQRMYRMIADSSENATLIRRAGATYDRIAAEAQAQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0078 | - | - | 100% (191) | hypothetical protein MSMEG_0078 |
M. smegmatis MC2 155 | MSMEG_0055 | - | 6e-22 | 32.07% (184) | hypothetical protein MSMEG_0055 |
M. smegmatis MC2 155 | MSMEG_0723 | - | 1e-21 | 33.71% (178) | hypothetical protein MSMEG_0723 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3894 | - | 3e-06 | 27.50% (80) | hypothetical protein Mb3894 |
M. gilvum PYR-GCK | Mflv_0157 | - | 7e-35 | 42.86% (189) | hypothetical protein Mflv_0157 |
M. tuberculosis H37Rv | Rv3864 | - | 3e-06 | 27.50% (80) | hypothetical protein Rv3864 |
M. leprae Br4923 | MLBr_00405 | - | 1e-06 | 25.98% (127) | hypothetical protein MLBr_00405 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_5429 | - | 6e-09 | 25.97% (154) | hypothetical protein MMAR_5429 |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_2666 | - | 2e-36 | 43.62% (188) | PUTATIVE putative hypothetical protein MSMEG_0078 |
M. ulcerans Agy99 | MUL_5045 | - | 6e-08 | 26.26% (99) | hypothetical protein MUL_5045 |
M. vanbaalenii PYR-1 | Mvan_0656 | - | 2e-19 | 31.38% (188) | hypothetical protein Mvan_0656 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0078|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK -----------MALGKLWVDAN-YFYGVADHANMMSSDPALGSAAIATDA TH_2666|M.thermoresistible__bu -------------MLDAYSTLN-WGKSVVEHPMSAKDHTGWGIAGTGADF Mb3894|M.bovis_AF2122/97 -------------------------------------------------- Rv3864|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_5429|M.marinum_M ---------MQDLSQRVLDELN-AAQANPP-------------------- MUL_5045|M.ulcerans_Agy99 -----MHPDEAATHNRSFEDLL-AYLEPDAGLFEPDGFESDAWETQFDGF Mvan_0656|M.vanbaalenii_PYR-1 MGLFDFYSDLMQHVGESMQRVDPFGPMGAAGEAVTSLFAVGNIVGDHGTD MLBr_00405|M.leprae_Br4923 -------------------------------------------------- MSMEG_0078|M.smegmatis_MC2_155 --------------MGDTKLAAAAATPIIAFGLRTMTIMSNLTG-VEGPE Mflv_0157|M.gilvum_PYR-GCK AILMQSLAAVGGSTMGATGLATSVATPIINAGLMTLTAASNTLG-FGRPE TH_2666|M.thermoresistible__bu VTLMQGMTEAG-SGLDQGRLAKAAATPIIRAALLAMMVMSNTCG-VGTPE Mb3894|M.bovis_AF2122/97 ---------------------MASGSGLCKTTSNFIWGQLLLLG-EGIPD Rv3864|M.tuberculosis_H37Rv ---------------------MASGSGLCKTTSNFIWGQLLLLG-EGIPD MMAR_5429|M.marinum_M ---------AAEEELTDSFLSKHRGSVVCLGTDGILGGLLAWLG-HEFPD MUL_5045|M.ulcerans_Agy99 ESDVGEIEREAEAGAADNPHELCPGTVVCGATLTILGVMWGWLG-DESPE Mvan_0656|M.vanbaalenii_PYR-1 AMWNLAGDAGDVASVAQSMLPFAKQTLIIEGGLKMISVMEEQSGGANVPS MLBr_00405|M.leprae_Br4923 ----------------------MSGAFIIDPTLKAIEAWHALLG-IGVPN : : : * *. MSMEG_0078|M.smegmatis_MC2_155 HGDRYGQGAEAFSGVSSGLDGTRSPDSWEGSSSDAYSDRNREQKERAALM Mflv_0157|M.gilvum_PYR-GCK DGERFTDGARQFSEANDELQQAVPPPDWQGDASDAYGLRNTEQQQRAGSM TH_2666|M.thermoresistible__bu KGDRFEEGAQAFEAAGEALGATKSPESWQGKASNTYTDRNDEQRARAERM Mb3894|M.bovis_AF2122/97 PGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVM Rv3864|M.tuberculosis_H37Rv PGDIFNTGSSLFKQISDKMGLAIPGTNWIGQAAEAYLNQNIAQQLRAQVM MMAR_5429|M.marinum_M QGDRLDSSGSMFDGVIAQIAALGPDGGWQGSAARAYGARNLAQSQHTGLM MUL_5045|M.ulcerans_Agy99 QGDRLASSGSLFDDVGAQVAALGPDGGWRGNAAQAYWVQNLAQSRHATLM Mvan_0656|M.vanbaalenii_PYR-1 EGESYSDSAHRFNQVGDTLASAMPDDRWRGTAADAYTLANEQQYARAGKL MLBr_00405|M.leprae_Br4923 DGGVLYSSLSFFEKALEHLAAAFPGDGWLGSAADKYAGQNRKRVDIFQEL * . *. : . * * :: * * : : MSMEG_0078|M.smegmatis_MC2_155 AETDRVVKEVLDKEAGEIEDTRRQIDHQMTELTWLIPAAIAAKFWNAPPG Mflv_0157|M.gilvum_PYR-GCK ATFDGQIQEVLAEEAGQVQDTRDFVSTRQVMLAAAIPAAITAKLI--PPG TH_2666|M.thermoresistible__bu AAIDRTVKEILDAEAHQVDVARKMLDRCQTVLSLSIPAAIAAKAI---PF Mb3894|M.bovis_AF2122/97 GDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI---PL Rv3864|M.tuberculosis_H37Rv GDLDKLTGNMISNQAKYVSDTRDVLRAMKKMIDGVYKVCKGLEKI---PL MMAR_5429|M.marinum_M ADLDRLAAELVSAQADDVHKVRSTLWALVAIVSVLLVVCIGLELQ---GP MUL_5045|M.ulcerans_Agy99 ADLDRLTAGLVSSQADAVKQARERLSVLIAVVLGVLVVCAGLELG---GP Mvan_0656|M.vanbaalenii_PYR-1 ADADLKVRMALSAEAGEVRTARRMFNQAATVLGNAIVPALAARALG---K MLBr_00405|M.leprae_Br4923 AELDKELIELIHNQANSVQTTRGILDGAKKALLFVRPVAIDLNYIP---L . * : :* : .* . : . . MSMEG_0078|M.smegmatis_MC2_155 SGEIASQIIQWGGVAKTLPIATQRMYRMIADSSENATLIRRAGATYDRIA Mflv_0157|M.gilvum_PYR-GCK -GAAAAMAIELAAVAATVPFAMQRVTEMVSHSADNADRIRQIGSHYGVVD TH_2666|M.thermoresistible__bu KGPAISTAIEVAAVAGTAPLASLRYNELTRAVIRNAARMTQAAGEYSSVA Mb3894|M.bovis_AF2122/97 LGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEML Rv3864|M.tuberculosis_H37Rv LGHLWSWELAIPMSGIAMAVVGGALLYLTIMTLMNATNLRGILGRLIEML MMAR_5429|M.marinum_M EGQLVSFYSALPICGTALFVAAVALTFLAVTTSRNASAVQAATQRLTAMV MUL_5045|M.ulcerans_Agy99 EGQLPSFHIAVAACGVVQVAAAATLIGLANKTSSNASSLRAATQRATEML Mvan_0656|M.vanbaalenii_PYR-1 HGKAISYGIETGAVASSMPICIWHMTQLAGHSARAAETLKDAVALYEQVA MLBr_00405|M.leprae_Br4923 VGSVMSASIQAQACAAAMAAVSGGLAYLLVQTAIHTAKFVALLARLAHLL * : . : : . : MSMEG_0078|M.smegmatis_MC2_155 AEAQ-----------------------------AQ--------------- Mflv_0157|M.gilvum_PYR-GCK ESAQ-----------------------------MPGGLSGAQSGTPAP-- TH_2666|M.thermoresistible__bu SAAN-----------------------------PS--------------- Mb3894|M.bovis_AF2122/97 TTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTP Rv3864|M.tuberculosis_H37Rv TTLPKFPGLPGLPSLPDIIDGLWPPKLPDIPIPGLPDIPGLPDFKWPPTP MMAR_5429|M.marinum_M AALT----------------------------TGPDAVPGSPEMPTPPKY MUL_5045|M.ulcerans_Agy99 AARS----------------------------AGSDAIPGSAGMTAP--- Mvan_0656|M.vanbaalenii_PYR-1 NEGYSVRM------------------------------------------ MLBr_00405|M.leprae_Br4923 ASAVADVVS-----------------------DGVAIIKGIVDHLWHFIA MSMEG_0078|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK ----------------------------------LRVSESIRGTAGIQQN TH_2666|M.thermoresistible__bu -------------------------------------------------- Mb3894|M.bovis_AF2122/97 GSPLFPDLPSFPGFPGFPSLPGFPGLPGFPEFPAIPGFPALPGLPSIPNL Rv3864|M.tuberculosis_H37Rv GSPLFPDLPSFPGFP------------GFPEFPAIPGFPALPGLPSIPNL MMAR_5429|M.marinum_M CLSEF--------------------------DLAEDTGPTPPQLPDLGSA MUL_5045|M.ulcerans_Agy99 -----------------------------------DVG-TPP-------- Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MLBr_00405|M.leprae_Br4923 GALTGLKDIVEKIIHWFFGLFSHWWSRLHSFFGGIPGLSGATSGLSQVTG MSMEG_0078|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK VAATIDSARSAPDGSAGDVFKTHGVVCTSTAAALKSAELARRSAAEKMHL TH_2666|M.thermoresistible__bu -------------------------------------------------- Mb3894|M.bovis_AF2122/97 FPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNLLS- Rv3864|M.tuberculosis_H37Rv FPGLPGLGDLLPGVGDLGKLPTWTELAALPDFLGGFAGLPSLGFGNLLS- MMAR_5429|M.marinum_M FTDLPGAPEFHLATGTGAGLPDFGAPQLPIPALTGLPTLPGPTNLTDLTS MUL_5045|M.ulcerans_Agy99 -------------SGARPRL------------------------------ Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MLBr_00405|M.leprae_Br4923 LFGVPGLAGSSGLLSGESLLSTENLPSLAG--VGAGLGLGSLPQLAQLHA MSMEG_0078|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK ISTDLSAKLGSSATEYSHTEQQNADAVDRQMPPR---------------- TH_2666|M.thermoresistible__bu -------------------------------------------------- Mb3894|M.bovis_AF2122/97 -FASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGG Rv3864|M.tuberculosis_H37Rv -FASLPTVGQVTATMGQLQQLVAAGGGPSQLASMGSQQAQLISSQAQQGG MMAR_5429|M.marinum_M VLAGLPTIAQLSTTLSQLTNLAGPTSTTTQPAQQHTTPADHPTQDDATDT MUL_5045|M.ulcerans_Agy99 -------------------DVAGDTARIRR-------------------T Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MLBr_00405|M.leprae_Br4923 ASTRQGTRSQAGVSAELSTEQFGGQQEPVSAQGSQGMGGSQGMGGMTPAS MSMEG_0078|M.smegmatis_MC2_155 --------------------------------------------- Mflv_0157|M.gilvum_PYR-GCK --------------------------------------------- TH_2666|M.thermoresistible__bu --------------------------------------------- Mb3894|M.bovis_AF2122/97 QQHATLVSDKKEDEEGAAAGVAEAERAPIDAGTAASQRGQEGTVL Rv3864|M.tuberculosis_H37Rv QQHATLVSDKKEDEE----GVAEAERAPIDAGTAASQRGQEGTVL MMAR_5429|M.marinum_M PDTAAAATTTS------------GERAPLGSTTRPTQQNQDLVV- MUL_5045|M.ulcerans_Agy99 PDRGAAYAELL------------DRS------------------- Mvan_0656|M.vanbaalenii_PYR-1 --------------------------------------------- MLBr_00405|M.leprae_Br4923 TKSKKDERKKKKYSEGAAAGTDDAERAPIEVQSGGGKRALAQHVV