For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MQDLSQRVLDELNAAQANPPAAEEELTDSFLSKHRGSVVCLGTDGILGGLLAWLGHEFPDQGDRLDSSGS MFDGVIAQIAALGPDGGWQGSAARAYGARNLAQSQHTGLMADLDRLAAELVSAQADDVHKVRSTLWALVA IVSVLLVVCIGLELQGPEGQLVSFYSALPICGTALFVAAVALTFLAVTTSRNASAVQAATQRLTAMVAAL TTGPDAVPGSPEMPTPPKYCLSEFDLAEDTGPTPPQLPDLGSAFTDLPGAPEFHLATGTGAGLPDFGAPQ LPIPALTGLPTLPGPTNLTDLTSVLAGLPTIAQLSTTLSQLTNLAGPTSTTTQPAQQHTTPADHPTQDDA TDTPDTAAAATTTSGERAPLGSTTRPTQQNQDLVV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_5429 | - | - | 100% (385) | hypothetical protein MMAR_5429 |
M. marinum M | MMAR_5431 | - | e-141 | 70.54% (370) | hypothetical protein MMAR_5431 |
M. marinum M | MMAR_5427 | - | e-129 | 71.47% (347) | hypothetical protein MMAR_5427 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3894 | - | 5e-34 | 29.01% (424) | hypothetical protein Mb3894 |
M. gilvum PYR-GCK | Mflv_0157 | - | 3e-09 | 26.83% (164) | hypothetical protein Mflv_0157 |
M. tuberculosis H37Rv | Rv3864 | - | 3e-33 | 29.90% (408) | hypothetical protein Rv3864 |
M. leprae Br4923 | MLBr_00405 | - | 2e-11 | 28.99% (169) | hypothetical protein MLBr_00405 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1188 | - | 4e-09 | 28.57% (231) | hypothetical protein MSMEG_1188 |
M. thermoresistible (build 8) | TH_2666 | - | 5e-08 | 24.18% (153) | PUTATIVE putative hypothetical protein MSMEG_0078 |
M. ulcerans Agy99 | MUL_5045 | - | 6e-60 | 55.07% (227) | hypothetical protein MUL_5045 |
M. vanbaalenii PYR-1 | Mvan_0656 | - | 1e-08 | 27.42% (124) | hypothetical protein Mvan_0656 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0157|M.gilvum_PYR-GCK -------------------------------------------------- TH_2666|M.thermoresistible__bu -------------------------------------------------- MMAR_5429|M.marinum_M -------------------------------------------------- MUL_5045|M.ulcerans_Agy99 -------------------------------------------------- Mb3894|M.bovis_AF2122/97 -------------------------------------------------- Rv3864|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00405|M.leprae_Br4923 -------------------------------------------------- Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1188|M.smegmatis_MC2_155 MDVVLGVAVTGRVARLAMIGAPANGGQLLDQYALDLSDDGLAELAETIIG Mflv_0157|M.gilvum_PYR-GCK -----------------------------MALGKLWVDAN-YFYGVADHA TH_2666|M.thermoresistible__bu -------------------------------MLDAYSTLN-WGKSVVEHP MMAR_5429|M.marinum_M ---------------------------MQDLSQRVLDELN-AAQANPP-- MUL_5045|M.ulcerans_Agy99 -----------------------MHPDEAATHNRSFEDLL-AYLEPDAGL Mb3894|M.bovis_AF2122/97 -------------------------------------------------- Rv3864|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00405|M.leprae_Br4923 -------------------------------------------------- Mvan_0656|M.vanbaalenii_PYR-1 ------------------MGLFDFYSDLMQHVGESMQRVDPFGPMGAAGE MSMEG_1188|M.smegmatis_MC2_155 TYQAVTESGNQVAATRLCLPDPAEADTLRMTVANAGVPNVDVVAEAEAAA Mflv_0157|M.gilvum_PYR-GCK NMMSSDPALGSAAIATDAAILMQSLAAVGGSTMGATGLATSVATPIINAG TH_2666|M.thermoresistible__bu MSAKDHTGWGIAGTGADFVTLMQGMTEAG-SGLDQGRLAKAAATPIIRAA MMAR_5429|M.marinum_M ---------------------------AAEEELTDSFLSKHRGSVVCLGT MUL_5045|M.ulcerans_Agy99 FEPDGFESDAWETQFDGFESDVGEIEREAEAGAADNPHELCPGTVVCGAT Mb3894|M.bovis_AF2122/97 ---------------------------------------MASGSGLCKTT Rv3864|M.tuberculosis_H37Rv ---------------------------------------MASGSGLCKTT MLBr_00405|M.leprae_Br4923 ----------------------------------------MSGAFIIDPT Mvan_0656|M.vanbaalenii_PYR-1 AVTSLFAVGNIVGDHGTDAMWNLAGDAGDVASVAQSMLPFAKQTLIIEGG MSMEG_1188|M.smegmatis_MC2_155 ALARSAGADAALLVADDDTASLTVIGEAPEGPSTSTLASVPIGTAGVAAA : Mflv_0157|M.gilvum_PYR-GCK LMTLTAASNTLG-FGRPEDGERFTDGARQFSEANDELQQAVPPPDWQGDA TH_2666|M.thermoresistible__bu LLAMMVMSNTCG-VGTPEKGDRFEEGAQAFEAAGEALGATKSPESWQGKA MMAR_5429|M.marinum_M DGILGGLLAWLG-HEFPDQGDRLDSSGSMFDGVIAQIAALGPDGGWQGSA MUL_5045|M.ulcerans_Agy99 LTILGVMWGWLG-DESPEQGDRLASSGSLFDDVGAQVAALGPDGGWRGNA Mb3894|M.bovis_AF2122/97 SNFIWGQLLLLG-EGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA Rv3864|M.tuberculosis_H37Rv SNFIWGQLLLLG-EGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNWIGQA MLBr_00405|M.leprae_Br4923 LKAIEAWHALLG-IGVPNDGGVLYSSLSFFEKALEHLAAAFPGDGWLGSA Mvan_0656|M.vanbaalenii_PYR-1 LKMISVMEEQSGGANVPSEGESYSDSAHRFNQVGDTLASAMPDDRWRGTA MSMEG_1188|M.smegmatis_MC2_155 CATVLQQAAGEAPTRVMLVGQRLDLDSVAAELRSMAPVEVPPDAGFAIAR : . * . . . : Mflv_0157|M.gilvum_PYR-GCK SDAYGLRNTEQQQRAGSMATFDGQIQEVLAEEAGQVQDTRDFVSTRQVML TH_2666|M.thermoresistible__bu SNTYTDRNDEQRARAERMAAIDRTVKEILDAEAHQVDVARKMLDRCQTVL MMAR_5429|M.marinum_M ARAYGARNLAQSQHTGLMADLDRLAAELVSAQADDVHKVRSTLWALVAIV MUL_5045|M.ulcerans_Agy99 AQAYWVQNLAQSRHATLMADLDRLTAGLVSSQADAVKQARERLSVLIAVV Mb3894|M.bovis_AF2122/97 AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMI Rv3864|M.tuberculosis_H37Rv AEAYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDVLRAMKKMI MLBr_00405|M.leprae_Br4923 ADKYAGQNRKRVDIFQELAELDKELIELIHNQANSVQTTRGILDGAKKAL Mvan_0656|M.vanbaalenii_PYR-1 ADAYTLANEQQYARAGKLADADLKVRMALSAEAGEVRTARRMFNQAATVL MSMEG_1188|M.smegmatis_MC2_155 GAAQSAEGFAPAGAATQMAPALDATQMAPAATDATQLAPSVDATQLAPAA . . :. Mflv_0157|M.gilvum_PYR-GCK AAAIPAAITAKLIPPGGAAAAMAIELA----------------------- TH_2666|M.thermoresistible__bu SLSIPAAIAAKAIPFKGPAISTAIEVA----------------------- MMAR_5429|M.marinum_M SVLLVVCIGLELQGPEGQLVSFYSALP----------------------- MUL_5045|M.ulcerans_Agy99 LGVLVVCAGLELGGPEGQLPSFHIAVA----------------------- Mb3894|M.bovis_AF2122/97 DGVYKVCKGLEKIPLLGHLWSWELAIP----------------------- Rv3864|M.tuberculosis_H37Rv DGVYKVCKGLEKIPLLGHLWSWELAIP----------------------- MLBr_00405|M.leprae_Br4923 LFVRPVAIDLNYIPLVGSVMSASIQAQ----------------------- Mvan_0656|M.vanbaalenii_PYR-1 GNAIVPALAARALGKHGKAISYGIETG----------------------- MSMEG_1188|M.smegmatis_MC2_155 DATQPAPAAADATQMAPAASDATVATPTDAAGQVGPELAYSQEPEAEPWA Mflv_0157|M.gilvum_PYR-GCK -----------------------------------AVAATVPFAMQRVTE TH_2666|M.thermoresistible__bu -----------------------------------AVAGTAPLASLRYNE MMAR_5429|M.marinum_M -----------------------------------ICGTALFVAAVALTF MUL_5045|M.ulcerans_Agy99 -----------------------------------ACGVVQVAAAATLIG Mb3894|M.bovis_AF2122/97 -----------------------------------MSGIAMAVVGGALLY Rv3864|M.tuberculosis_H37Rv -----------------------------------MSGIAMAVVGGALLY MLBr_00405|M.leprae_Br4923 -----------------------------------ACAAAMAAVSGGLAY Mvan_0656|M.vanbaalenii_PYR-1 -----------------------------------AVASSMPICIWHMTQ MSMEG_1188|M.smegmatis_MC2_155 EYDEMPMDPLSEFVPEQAEEAGYTTVIAPPPPRMLLVGSALTFVAVSFAT . Mflv_0157|M.gilvum_PYR-GCK MVSHSADNADRIRQIGSHYGVVDESAQ----------------------- TH_2666|M.thermoresistible__bu LTRAVIRNAARMTQAAGEYSSVASAAN----------------------- MMAR_5429|M.marinum_M LAVTTSRNASAVQAATQRLTAMVAALT----------------------- MUL_5045|M.ulcerans_Agy99 LANKTSSNASSLRAATQRATEMLAARS----------------------- Mb3894|M.bovis_AF2122/97 LTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPPKL Rv3864|M.tuberculosis_H37Rv LTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPPKL MLBr_00405|M.leprae_Br4923 LLVQTAIHTAKFVALLARLAHLLASAVAD--------------------- Mvan_0656|M.vanbaalenii_PYR-1 LAGHSARAAETLKDAVALYEQVANEGYSVRM------------------- MSMEG_1188|M.smegmatis_MC2_155 LAVTVAINVRPAADVRAQPVTPTQSDTVPGRYLPPVPHEPDPVALPVTVL : . Mflv_0157|M.gilvum_PYR-GCK ----MPGGLSGAQSGTPAP------------------------------- TH_2666|M.thermoresistible__bu ----PS-------------------------------------------- MMAR_5429|M.marinum_M -----TGPDAVP--GSPEMPTPPKYCLSEFDLAEDTGPTPPQLPDLG--- MUL_5045|M.ulcerans_Agy99 -----AGSDAIP--GSAGMTAP------------DVG-TPP--------- Mb3894|M.bovis_AF2122/97 PDIPIPGLPDIP--GLPDFKWPPTPGSPLFPDLPSFPGFPGFPSLPGFPG Rv3864|M.tuberculosis_H37Rv PDIPIPGLPDIP--GLPDFKWPPTPGSPLFPDLPSFPGFP---------- MLBr_00405|M.leprae_Br4923 ----VVSDGVAIIKGIVDHLWHFIAGALTGLKDIVEKIIHWFFGLFSHWW Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1188|M.smegmatis_MC2_155 TPPPAQPVAPNTRTGNNTQPAPQAPPAPQAPPPAAPAPQPPAPQAPAPVP Mflv_0157|M.gilvum_PYR-GCK ----------------------LRVSESIRGTAGIQQNVAATIDSARSAP TH_2666|M.thermoresistible__bu -------------------------------------------------- MMAR_5429|M.marinum_M -------SAFTDLPGAPEFHLATGTGAGLPDFGAPQLPIPALTGLPTLPG MUL_5045|M.ulcerans_Agy99 ----------------------SGARPRL--------------------- Mb3894|M.bovis_AF2122/97 LPGFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTE Rv3864|M.tuberculosis_H37Rv --GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTE MLBr_00405|M.leprae_Br4923 SRLHSFFGGIPGLSGATSGLSQVTGLFGVPGLAGSSGLLSGESLLSTENL Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1188|M.smegmatis_MC2_155 IPVPLPPVIVVPPLTPPWTPPWATPTSPTTPPTSTSTPTTTPPTTPSTTP Mflv_0157|M.gilvum_PYR-GCK DGSAGDVFKTHGVVCTSTAAALKSAELARRSAAEKMHLISTDLSAKLGSS TH_2666|M.thermoresistible__bu -------------------------------------------------- MMAR_5429|M.marinum_M PTNLTDLTSVLAGLPTIAQLSTTLSQLTNLAGPTSTTTQPAQQHTTPADH MUL_5045|M.ulcerans_Agy99 ----------------------------DVAGDTARIRR----------- Mb3894|M.bovis_AF2122/97 LAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGG Rv3864|M.tuberculosis_H37Rv LAALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGG MLBr_00405|M.leprae_Br4923 PSLAGVGAGLGLGSLPQLAQLHAASTRQGTRSQAGVSAELSTEQFGGQQE Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1188|M.smegmatis_MC2_155 PTTTAPPTSTTTAPPTTSTTTAPTTTTVPTTTAPPTSSVPTTTSAPTTTY Mflv_0157|M.gilvum_PYR-GCK ATEYSHTEQQNADAVDRQMPPR---------------------------- TH_2666|M.thermoresistible__bu -------------------------------------------------- MMAR_5429|M.marinum_M PTQDDATDTPDTAAAATTTSG--------------------------ERA MUL_5045|M.ulcerans_Agy99 --------TPDRGAAYAELLD--------------------------RS- Mb3894|M.bovis_AF2122/97 PSQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGAAAGVAEAERA Rv3864|M.tuberculosis_H37Rv PSQLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEE----GVAEAERA MLBr_00405|M.leprae_Br4923 PVSAQGSQGMGGSQGMGGMTPASTKSKKDERKKKKYSEGAAAGTDDAERA Mvan_0656|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_1188|M.smegmatis_MC2_155 TPPVEEEPTYTPPVEEPTYTAPVEQPSTTVYPDTPSWGDDSSSSGGSSGG Mflv_0157|M.gilvum_PYR-GCK ----------------------------------- TH_2666|M.thermoresistible__bu ----------------------------------- MMAR_5429|M.marinum_M PLGSTTRPTQQNQDLVV------------------ MUL_5045|M.ulcerans_Agy99 ----------------------------------- Mb3894|M.bovis_AF2122/97 PIDAGTAASQRGQEGTVL----------------- Rv3864|M.tuberculosis_H37Rv PIDAGTAASQRGQEGTVL----------------- MLBr_00405|M.leprae_Br4923 PIEVQSGGGKRALAQHVV----------------- Mvan_0656|M.vanbaalenii_PYR-1 ----------------------------------- MSMEG_1188|M.smegmatis_MC2_155 SRGGSSGSSSDDSSSGGSYGGGSDDSPVTTIFDSP