For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MYLSQLQRLVQQISRWVRGDGNLQNFQDIQEGGGNPPPAQEGAPDNSPWARRGSVVCGVTEGILGLLLAL LGEAVPSRGESLDRSGSMFDGVSTQIATLDPDGGWRGNAARAYGAKNLAQSQHTTLIADLDRLTGELVSS QADAVKRARDLLSAEIWIVLVLLVVCIGLELHGPEGQILSFHIAIPICTMAVFTAATALGVLAATTSQNA SAVQAATQRLTAMAAALTTGADTVPSSPKMTFPPIHSLSEFDLTEATGPTPPQLPDLQSTLAELPGAPEF HLATRAGAGFPDFGAPQLPITELTGLPTLPDPTNLTDPTSMLADLPTIAQLSTTLSQLTNLAGPTSATTQ PAQQHTTPADHRTQDDATNTPDTATATAATSSSERAPLDTQTHPHRQRLLT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_5431 | - | - | 100% (401) | hypothetical protein MMAR_5431 |
| M. marinum M | MMAR_5429 | - | e-141 | 70.54% (370) | hypothetical protein MMAR_5429 |
| M. marinum M | MMAR_5427 | - | e-116 | 65.49% (339) | hypothetical protein MMAR_5427 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3894 | - | 5e-30 | 28.61% (416) | hypothetical protein Mb3894 |
| M. gilvum PYR-GCK | Mflv_0157 | - | 9e-08 | 24.72% (178) | hypothetical protein Mflv_0157 |
| M. tuberculosis H37Rv | Rv3864 | - | 2e-31 | 29.25% (400) | hypothetical protein Rv3864 |
| M. leprae Br4923 | MLBr_00405 | - | 9e-13 | 26.03% (292) | hypothetical protein MLBr_00405 |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0723 | - | 4e-09 | 29.84% (124) | hypothetical protein MSMEG_0723 |
| M. thermoresistible (build 8) | TH_2579 | - | 2e-07 | 33.67% (98) | PUTATIVE hypothetical protein Mvan_1151 |
| M. ulcerans Agy99 | MUL_5045 | - | 7e-58 | 56.52% (207) | hypothetical protein MUL_5045 |
| M. vanbaalenii PYR-1 | Mvan_0656 | - | 8e-10 | 27.75% (173) | hypothetical protein Mvan_0656 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_5431|M.marinum_M -----------------------MY---LSQLQRLVQQISRWVRGDGNLQ
MUL_5045|M.ulcerans_Agy99 -----------------------MHPDEAATHNRSFEDLLAYLEPDAGLF
Mb3894|M.bovis_AF2122/97 --------------------------------------------------
Rv3864|M.tuberculosis_H37Rv --------------------------------------------------
Mflv_0157|M.gilvum_PYR-GCK --------------------MALGKLWVDANYFYGVADHANMMSSDPALG
MSMEG_0723|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0656|M.vanbaalenii_PYR-1 ----------------------MGLFDFYSDLMQHVGESMQRVDPFGPMG
MLBr_00405|M.leprae_Br4923 --------------------------------------------------
TH_2579|M.thermoresistible__bu MRIMGAVEGFFRLWDKTRATYGEGTPQTGEQFDHSAILRELETQLESTAP
MMAR_5431|M.marinum_M N------------FQDIQEGGGNPP-PAQEG-----APDNSPWARRGSVV
MUL_5045|M.ulcerans_Agy99 EPDGFESDAWETQFDGFESDVGEIEREAEAG-----AADNPHELCPGTVV
Mb3894|M.bovis_AF2122/97 -------------------------------------------MASGSGL
Rv3864|M.tuberculosis_H37Rv -------------------------------------------MASGSGL
Mflv_0157|M.gilvum_PYR-GCK SAAIATDAAILMQSLAAVGG--------------STMGATGLATSVATPI
MSMEG_0723|M.smegmatis_MC2_155 ----------------------------------------MFPKCPQTPI
Mvan_0656|M.vanbaalenii_PYR-1 AAGEAVTSLFAVGNIVGDHGTDAMWNLAGDAGDVASVAQSMLPFAKQTLI
MLBr_00405|M.leprae_Br4923 --------------------------------------------MSGAFI
TH_2579|M.thermoresistible__bu GDQWTGTAADAYGAVNAEHRRVIGELANLDQRLGAQVTKSAQVVTAGRDD
MMAR_5431|M.marinum_M CGVTEGILGLLLALLG-EAVPSRGESLDRSGSMFDGVSTQIATLDPDGGW
MUL_5045|M.ulcerans_Agy99 CGATLTILGVMWGWLG-DESPEQGDRLASSGSLFDDVGAQVAALGPDGGW
Mb3894|M.bovis_AF2122/97 CKTTSNFIWGQLLLLG-EGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNW
Rv3864|M.tuberculosis_H37Rv CKTTSNFIWGQLLLLG-EGIPDPGDIFNTGSSLFKQISDKMGLAIPGTNW
Mflv_0157|M.gilvum_PYR-GCK INAGLMTLTAASNTLG-FGRPEDGERFTDGARQFSEANDELQQAVPPPDW
MSMEG_0723|M.smegmatis_MC2_155 IQAGLLAISAMSLQCG-LGTPDDGSRFGDGCGEFRKTDELQESAAPNEQW
Mvan_0656|M.vanbaalenii_PYR-1 IEGGLKMISVMEEQSGGANVPSEGESYSDSAHRFNQVGDTLASAMPDDRW
MLBr_00405|M.leprae_Br4923 IDPTLKAIEAWHALLG-IGVPNDGGVLYSSLSFFEKALEHLAAAFPGDGW
TH_2579|M.thermoresistible__bu LENLRYRVAAIAARLP-EGTAGDAMRYTLVRDGTSQLTELVRRSISDLNI
: . . .
MMAR_5431|M.marinum_M RGNAAR----AYGAKNLAQSQHTTLIADLDRLTGELVSSQADAVKRARDL
MUL_5045|M.ulcerans_Agy99 RGNAAQ----AYWVQNLAQSRHATLMADLDRLTAGLVSSQADAVKQARER
Mb3894|M.bovis_AF2122/97 IGQAAE----AYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDV
Rv3864|M.tuberculosis_H37Rv IGQAAE----AYLNQNIAQQLRAQVMGDLDKLTGNMISNQAKYVSDTRDV
Mflv_0157|M.gilvum_PYR-GCK QGDASD----AYGLRNTEQQQRAGSMATFDGQIQEVLAEEAGQVQDTRDF
MSMEG_0723|M.smegmatis_MC2_155 QGSASK----AYDAQVVRQRERAQKLAQADEMMQEVIRSQAEQVSQTRQL
Mvan_0656|M.vanbaalenii_PYR-1 RGTAAD----AYTLANEQQYARAGKLADADLKVRMALSAEAGEVRTARRM
MLBr_00405|M.leprae_Br4923 LGSAAD----KYAGQNRKRVDIFQELAELDKELIELIHNQANSVQTTRGI
TH_2579|M.thermoresistible__bu VGAEIDRIGNEYAALGNQKFGGGPKNNGAERQLEKDSDPEPDASEGANAA
* * : : :. :.
MMAR_5431|M.marinum_M LSAEIWIVLVLLVVCIGLELHGPEGQILSFHIAIPICTMAVFTAATALGV
MUL_5045|M.ulcerans_Agy99 LSVLIAVVLGVLVVCAGLELGGPEGQLPSFHIAVAACGVVQVAAAATLIG
Mb3894|M.bovis_AF2122/97 LRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSGIAMAVVGGALLY
Rv3864|M.tuberculosis_H37Rv LRAMKKMIDGVYKVCKGLEKIPLLGHLWSWELAIPMSGIAMAVVGGALLY
Mflv_0157|M.gilvum_PYR-GCK VSTRQVMLAAAIPAAITAKLIPPGGAAAAMAIELAAVAATVPFAMQRVTE
MSMEG_0723|M.smegmatis_MC2_155 LDIYSIALAAMIVPATIAMYTPYG-QPASVAIQAGAVAGTVPLATGSMLA
Mvan_0656|M.vanbaalenii_PYR-1 FNQAATVLGNAIVPALAARALGKHGKAISYGIETGAVASSMPICIWHMTQ
MLBr_00405|M.leprae_Br4923 LDGAKKALLFVRPVAIDLNYIPLVGSVMSASIQAQACAAAMAAVSGGLAY
TH_2579|M.thermoresistible__bu ASGSEPGEPGGPEFAIGPPTKPDIEWDEDFEYGSEQPSVRDYVSRAEWEA
.
MMAR_5431|M.marinum_M LAATTSQNASAVQAATQRLTAMAAALT-----------------------
MUL_5045|M.ulcerans_Agy99 LANKTSSNASSLRAATQRATEMLAARS-----------------------
Mb3894|M.bovis_AF2122/97 LTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPPKL
Rv3864|M.tuberculosis_H37Rv LTIMTLMNATNLRGILGRLIEMLTTLPKFPGLPGLPSLPDIIDGLWPPKL
Mflv_0157|M.gilvum_PYR-GCK MVSHSADNADRIRQIGSHYGVVDESAQ-----------------------
MSMEG_0723|M.smegmatis_MC2_155 MAALANANAAKVLQATAHYTEVAGEA------------------------
Mvan_0656|M.vanbaalenii_PYR-1 LAGHSARAAETLKDAVALYEQVANEGY-----------------------
MLBr_00405|M.leprae_Br4923 LLVQTAIHTAKFVALLARLAHLLASAVADVVS------------------
TH_2579|M.thermoresistible__bu KLAAARLIRPDLDDATQMYAHYWGNSG-----------------------
: .
MMAR_5431|M.marinum_M -----TGADTVPSSPKMTFPPIHSLSEFDLTEAT----------------
MUL_5045|M.ulcerans_Agy99 -----AGSDAIPGSAGMTAPDVG---------------------------
Mb3894|M.bovis_AF2122/97 PDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFPGFPSLPGFPGLP
Rv3864|M.tuberculosis_H37Rv PDIPIPGLPDIPGLPDFKWPPTPGSPLFPDLPSFPGFP------------
Mflv_0157|M.gilvum_PYR-GCK ------MPGGLSGAQSGTPAPLRVSESIRGTAGIQQN-------------
MSMEG_0723|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0656|M.vanbaalenii_PYR-1 ------SVRM----------------------------------------
MLBr_00405|M.leprae_Br4923 -----DGVAIIKGIVDHLWHFIAGALTGLKDIVEKIIHWFFGLFSHWWSR
TH_2579|M.thermoresistible__bu -----EPLKFDYEEAYREDPAVRANVEDQISRAQRGAEG-----------
MMAR_5431|M.marinum_M -------GPTPPQLPDLQSTLAELPGAPEF-HLATRAGAGFPDFGAPQLP
MUL_5045|M.ulcerans_Agy99 ---------TPP------------------------SGA------RPRL-
Mb3894|M.bovis_AF2122/97 GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELA
Rv3864|M.tuberculosis_H37Rv GFPEFPAIPGFPALPGLPSIPNLFPGLPGLGDLLPGVGDLGKLPTWTELA
Mflv_0157|M.gilvum_PYR-GCK --------------------------------------------------
MSMEG_0723|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0656|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00405|M.leprae_Br4923 LHSFFGGIPGLSGATSGLSQVTGLFGVPGLAGSSGLLSGESLLSTENLPS
TH_2579|M.thermoresistible__bu ---------LLRAGNTSFSMTGDASPTQAYPVTENWQKSIGAYQQWSSAD
MMAR_5431|M.marinum_M ITELTGLPTLPDPTNLTDPTSMLADLPTIAQLSTTLSQLTNLAGPTSATT
MUL_5045|M.ulcerans_Agy99 ----------------------------------------DVAGDTARIR
Mb3894|M.bovis_AF2122/97 ALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPS
Rv3864|M.tuberculosis_H37Rv ALPDFLGGFAGLPSLGFGNLLSFASLPTVGQVTATMGQLQQLVAAGGGPS
Mflv_0157|M.gilvum_PYR-GCK -----------------------VAATIDSARSAPDGSAGDVFKTHGVVC
MSMEG_0723|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0656|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00405|M.leprae_Br4923 LAGVGAGLGLGSLPQLAQLHAASTRQGTRSQAGVSAELSTEQFGGQQEPV
TH_2579|M.thermoresistible__bu VQVDGNTVTMTITVHAEDRYNFNRGQADIATGAGDNENGRFTELGWARPF
MMAR_5431|M.marinum_M QPAQQHTTPADHRTQDDATNTPDTATATAATS-----------SSERAPL
MUL_5045|M.ulcerans_Agy99 R-------------------TPDRGAAYAELL-----------DRS----
Mb3894|M.bovis_AF2122/97 QLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEEGAAAGVAEAERAPI
Rv3864|M.tuberculosis_H37Rv QLASMGSQQAQLISSQAQQGGQQHATLVSDKKEDEE----GVAEAERAPI
Mflv_0157|M.gilvum_PYR-GCK TSTAAALKSAELARRSAAEKMHLISTDLSAKLGSSATEYSHTEQQNADAV
MSMEG_0723|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0656|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00405|M.leprae_Br4923 SAQGSQGMGGSQGMGGMTPASTKSKKDERKKKKYSEGAAAGTDDAERAPI
TH_2579|M.thermoresistible__bu DSYGEITRTVTWELGDDSSTQPSSTPEFSPGREDRSDGRGSSGGLQRPAN
MMAR_5431|M.marinum_M DTQTHPHRQRLLT---
MUL_5045|M.ulcerans_Agy99 ----------------
Mb3894|M.bovis_AF2122/97 DAGTAASQRGQEGTVL
Rv3864|M.tuberculosis_H37Rv DAGTAASQRGQEGTVL
Mflv_0157|M.gilvum_PYR-GCK DRQMPPR---------
MSMEG_0723|M.smegmatis_MC2_155 ----------------
Mvan_0656|M.vanbaalenii_PYR-1 ----------------
MLBr_00405|M.leprae_Br4923 EVQSGGGKRALAQHVV
TH_2579|M.thermoresistible__bu DRDTGSVSLP------