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PGPDLPLSGISVVEVSSFVAAPLCGMTLSQLGAQVIRVDPIGGASDIRRWPLAASGTSIYWTGLNKGKRS ATIDLRSAAGQRLVQRLVLEGDGVVVTNASLPWLSHEVLAATRSDIIHLQLLGRRDGGTGVDYTVNAATG FPLVTGPADHAGPINHVLPAWDVSCGLYAALSVVAALRRRDQTGAGAQISLALEDVALATAGNLGLLTEP QVNGTQRERLGNSIYGQYGQDFASRDGTSFMVITLTRRHFRDLVDVTGTGPAVTALAEALGVDFDAEGDR YRYRSVLNGLFAAWFADHTAEQIGAALSATTVLFERYRTFAEVAADPKVTANPLFSQLSQPGVGDYLAPG LPTAFDGCHPAGAPAPALGEHTADVLTEYLGLTTADIARLASAKTIGGPDGQQDKEYA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_4031 | - | - | 100% (409) | acyl-CoA transferase/carnitine dehydratase |
| M. marinum M | MMAR_1494 | - | 1e-25 | 26.88% (413) | hypothetical protein MMAR_1494 |
| M. marinum M | MMAR_3974 | - | 6e-25 | 28.23% (418) | acyl-CoA transferase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1897 | - | 3e-17 | 24.88% (414) | hypothetical protein Mb1897 |
| M. gilvum PYR-GCK | Mflv_4144 | - | 1e-140 | 60.96% (397) | L-carnitine dehydratase/bile acid-inducible protein F |
| M. tuberculosis H37Rv | Rv1866 | - | 3e-17 | 24.88% (414) | hypothetical protein Rv1866 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4651c | - | 2e-27 | 28.43% (401) | putative L-carnitine dehydratase |
| M. avium 104 | MAV_1574 | - | 0.0 | 81.66% (398) | L-carnitine dehydratase/bile acid-inducible protein F |
| M. smegmatis MC2 155 | MSMEG_2468 | - | 1e-146 | 62.38% (404) | L-carnitine dehydratase/bile acid-inducible protein F |
| M. thermoresistible (build 8) | TH_2496 | - | 2e-36 | 31.46% (410) | PUTATIVE L-carnitine dehydratase/bile acid-inducible protein F |
| M. ulcerans Agy99 | MUL_3896 | - | 0.0 | 98.78% (409) | acyl-CoA transferase/carnitine dehydratase |
| M. vanbaalenii PYR-1 | Mvan_2197 | - | 1e-141 | 61.21% (397) | L-carnitine dehydratase/bile acid-inducible protein F |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4031|M.marinum_M --------------------------------------------------
MUL_3896|M.ulcerans_Agy99 --------------------------------------------------
MAV_1574|M.avium_104 --------------------------------------------------
Mflv_4144|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2197|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2468|M.smegmatis_MC2_155 --------------------------------------------------
Mb1897|M.bovis_AF2122/97 MVTRLLADLGADVLKVQPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVL
Rv1866|M.tuberculosis_H37Rv MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVL
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2496|M.thermoresistible__bu --------------------------------------------------
MMAR_4031|M.marinum_M --------------------------------------------------
MUL_3896|M.ulcerans_Agy99 --------------------------------------------------
MAV_1574|M.avium_104 --------------------------------------------------
Mflv_4144|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2197|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2468|M.smegmatis_MC2_155 --------------------------------------------------
Mb1897|M.bovis_AF2122/97 NPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVAL
Rv1866|M.tuberculosis_H37Rv NPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVAL
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2496|M.thermoresistible__bu --------------------------------------------------
MMAR_4031|M.marinum_M --------------------------------------------------
MUL_3896|M.ulcerans_Agy99 --------------------------------------------------
MAV_1574|M.avium_104 --------------------------------------------------
Mflv_4144|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2197|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2468|M.smegmatis_MC2_155 --------------------------------------------------
Mb1897|M.bovis_AF2122/97 SITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATA
Rv1866|M.tuberculosis_H37Rv SITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATA
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2496|M.thermoresistible__bu --------------------------------------------------
MMAR_4031|M.marinum_M --------------------------------------------------
MUL_3896|M.ulcerans_Agy99 --------------------------------------------------
MAV_1574|M.avium_104 --------------------------------------------------
Mflv_4144|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2197|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2468|M.smegmatis_MC2_155 --------------------------------------------------
Mb1897|M.bovis_AF2122/97 AVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGI
Rv1866|M.tuberculosis_H37Rv AVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGI
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2496|M.thermoresistible__bu --------------------------------------------------
MMAR_4031|M.marinum_M --------------------------------------------------
MUL_3896|M.ulcerans_Agy99 --------------------------------------------------
MAV_1574|M.avium_104 --------------------------------------------------
Mflv_4144|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2197|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2468|M.smegmatis_MC2_155 --------------------------------------------------
Mb1897|M.bovis_AF2122/97 RSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQ
Rv1866|M.tuberculosis_H37Rv RSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQ
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2496|M.thermoresistible__bu --------------------------------------------------
MMAR_4031|M.marinum_M --------------------------------------------------
MUL_3896|M.ulcerans_Agy99 --------------------------------------------------
MAV_1574|M.avium_104 --------------------------------------------------
Mflv_4144|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2197|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2468|M.smegmatis_MC2_155 --------------------------------------------------
Mb1897|M.bovis_AF2122/97 DPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP
Rv1866|M.tuberculosis_H37Rv DPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2496|M.thermoresistible__bu --------------------------------------------------
MMAR_4031|M.marinum_M --------------------------------------------------
MUL_3896|M.ulcerans_Agy99 --------------------------------------------------
MAV_1574|M.avium_104 --------------------------------------------------
Mflv_4144|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2197|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2468|M.smegmatis_MC2_155 --------------------------------------------------
Mb1897|M.bovis_AF2122/97 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAG
Rv1866|M.tuberculosis_H37Rv SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAG
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2496|M.thermoresistible__bu --------------------------------------------------
MMAR_4031|M.marinum_M -----------------MPGPDLPLSGISVVEVSSFVAAPLCGMTLSQLG
MUL_3896|M.ulcerans_Agy99 -----------------MPGPDLPLSGISVVEVSSFVAAPLCGMTLSQLG
MAV_1574|M.avium_104 -----------------MTDPRLPLHGLSVVEVSSFVAAPLCGMTLSQLG
Mflv_4144|M.gilvum_PYR-GCK ----------MTEP---APDPARPLAGVRVVEISSFVAVPLAGMTLAQLG
Mvan_2197|M.vanbaalenii_PYR-1 ----------MTEP---APDPARPLAGVRVVEISSFVAVPLAGMTLAQLG
MSMEG_2468|M.smegmatis_MC2_155 ----------MAEPVAHTPDPTRPLAGVRIIEISSFVAVPLAGMTLAQLG
Mb1897|M.bovis_AF2122/97 QDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLG
Rv1866|M.tuberculosis_H37Rv QDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLG
MAB_4651c|M.abscessus_ATCC_199 ------------------MTG--ALDGIRVLELGTLIAGPFAGRLLGDMG
TH_2496|M.thermoresistible__bu -------------MAESEHADPAPLAGITVVALEQAVSAPMCTRVLADFG
.: *: :: : :: :.::*
MMAR_4031|M.marinum_M AQVIRVDPIGGASDIRRWPLAASG-TSIYWTGLNKGKRSATIDLRSAAGQ
MUL_3896|M.ulcerans_Agy99 AQVIRVDPIGGASDIRRWPLAASG-TSIYWTGLNKGKRSATIDLRSAAGQ
MAV_1574|M.avium_104 AEVIRVDPIGGASDVQRWPLAADG-TSIYWTGLNKGKRSATIDLRSAEGQ
Mflv_4144|M.gilvum_PYR-GCK AEVLRVDPVGGAADYRRWPLTESG-DSIYWAGLNKGKKSLAVDMRSGQGQ
Mvan_2197|M.vanbaalenii_PYR-1 AEVLRVDPVGGAADYKRWPLTEAG-DSIYWAGLNKGKRSLAVDMRSDTGQ
MSMEG_2468|M.smegmatis_MC2_155 AEVVRVDPIGGAADYHRWPVTDGG-DSIYWAGLNKGKRSVAADMRSPEGQ
Mb1897|M.bovis_AF2122/97 AEVIKVESADHPDGLRQTRVGDAMSESFAWTH--RNHLALGLDLRNSEGK
Rv1866|M.tuberculosis_H37Rv AEVIKVESADHPDGLRQTRVGDAMSESFAWTH--RNHLALGLDLRNSEGK
MAB_4651c|M.abscessus_ATCC_199 AEVLKIEPPGAPDPLRTWGQAEVDGHHVFWTVHARNKKAITLDLRTEAGR
TH_2496|M.thermoresistible__bu ARVIKVENPDGGDFARHYDDVVKG-QAAHFVWANRGKESVTLNLKSEAGM
*.*:::: . : :. :.: : :::. *
MMAR_4031|M.marinum_M RLVQRLVLEGDGVVVTNAS----LPWLSHEVLAATRSDIIHLQLLGRRDG
MUL_3896|M.ulcerans_Agy99 RLVQRLVLEGDGVVVTNAS----LPWLSHEVLAATRSDVIHLQLLGRRDG
MAV_1574|M.avium_104 RLVQRLIVEGDGVVVTNAAG---LSWLSHDALAALRADVIHVQLLGRGDG
Mflv_4144|M.gilvum_PYR-GCK ALVARLIADA-GVFITNVAG---RQWHSYDALRTDRPDLIHAEVSGRHDG
Mvan_2197|M.vanbaalenii_PYR-1 ELVARLIADS-GVFITNVAG---RQWHSYDALRQIRPDLIHVEVSGRHDG
MSMEG_2468|M.smegmatis_MC2_155 QVVQRLIAES-GVLITNAAG---RQWHSYEELAALRSDLIHVEVSGRADG
Mb1897|M.bovis_AF2122/97 AIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNR
Rv1866|M.tuberculosis_H37Rv AIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNR
MAB_4651c|M.abscessus_ATCC_199 ALFLDLVDKSDVIVENFRPGTLERWGLGYDVLAQRNKGIILVRVSGYGQT
TH_2496|M.thermoresistible__bu AVLHRLLDEADVLVSNLAPGALARMGLAADDLKTSHPRVLPVQIDGYGAG
:. *: .. :. . . . : * . :: .
MMAR_4031|M.marinum_M G-----TGVDYTVNAATGFPLVTGPADHAGPIN------HVLPAWDVSCG
MUL_3896|M.ulcerans_Agy99 G-----TGVDYTVNAATGFPLVTGPADHAGPIN------HVLPAWDVSCG
MAV_1574|M.avium_104 S-----TGVDYTVNAGIGYPLVTGPAEHAGPIN------HVLPAWDVCCG
Mflv_4144|M.gilvum_PYR-GCK G-----TGVDYTVNAAIGFPLVTGPPELSTPVN------HVLPAWDVTCG
Mvan_2197|M.vanbaalenii_PYR-1 G-----TGVDYTVNAAIGFPLVTGPPELTTPVN------HVLPAWDVTCG
MSMEG_2468|M.smegmatis_MC2_155 G-----TGVDYTVNAALGFPLVTGPAEVSTPVN------HVLPAWDVSCG
Mb1897|M.bovis_AF2122/97 GPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVG
Rv1866|M.tuberculosis_H37Rv GPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVG
MAB_4651c|M.abscessus_ATCC_199 GPDAHKAGYASVAEAASGLRHLNGFPGGPPPR-------MALSIGDTLAG
TH_2496|M.thermoresistible__bu GPISHKRAYDLLIQAESGACAVTGYPGMPAKPG--------PPVADISTG
. . .* * : * *
MMAR_4031|M.marinum_M LYAALSVVAALRRRDQ-----TGAGAQISLALEDVALATAGNLGLLTEPQ
MUL_3896|M.ulcerans_Agy99 LYAALVVVAALRRRDQ-----TGAGAQISLALEDVALATAGNLGLLTEPQ
MAV_1574|M.avium_104 LYAALSVVTAVHRREQ-----SGAGARISLALEDVALATAANLGLLTEPQ
Mflv_4144|M.gilvum_PYR-GCK IYTALSVVTALRHRDA-----TGHGQQISIPLENVALATAGNLSLLTEAM
Mvan_2197|M.vanbaalenii_PYR-1 IYAALSVVTALRHRDA-----TGHGQQISIPLENVALATAGNLSLLTEAM
MSMEG_2468|M.smegmatis_MC2_155 LYVALAVTAALRHRDA-----TGEGARISVPLENVALATAGNLGFLTEVM
Mb1897|M.bovis_AF2122/97 RVGALLALAALIHRDR-----TGGGAHVHISQAEVVVNQLDTMFVAEAAR
Rv1866|M.tuberculosis_H37Rv RVGALLALAALIHRDR-----TGGGAHVHISQAEVVVNQLDTMFVAEAAR
MAB_4651c|M.abscessus_ATCC_199 MFAAQGALAALYRRTV-----TGRGQVVDAALTESCLAVQESTIPDYDVG
TH_2496|M.thermoresistible__bu LYAALSVMALLYGRDRRDRATPGPVPAVAVSLFDTMTDIMGYQLTYTQHS
* . : : * .* : . :
MMAR_4031|M.marinum_M VNGTQRERLGNSIYGQYGQDFASRDGTSFMVITLTRRHFRDLVDVTGTGP
MUL_3896|M.ulcerans_Agy99 VNGTQRERLGNSIYGQYGQDFASRDGTSFMVITLTRRHFRDLVDVTGTGP
MAV_1574|M.avium_104 VVGTQRERLGNAIYGQYGQDFTSRDGARFMVVTLTGRHFRDLLDVTGTGA
Mflv_4144|M.gilvum_PYR-GCK INGTSRQRIGNAVYGTYGQNFTSSDGVSFMVVALTGRHFRDLNALTGTTE
Mvan_2197|M.vanbaalenii_PYR-1 INGTSRQRIGNAVYGTYGQNFTSSDGISYMVVALTGRHFRDLTALTGTTE
MSMEG_2468|M.smegmatis_MC2_155 INGTSRERLGNSLFGTYGQNFTSSDGVFFMLVALTGRHFRDLTEVTGTTK
Mb1897|M.bovis_AF2122/97 --ATDVAEIHPDTS-VHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPE
Rv1866|M.tuberculosis_H37Rv --ATDVAEIHPDTS-VHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPE
MAB_4651c|M.abscessus_ATCC_199 RVVRGPSGTRLEGI-APSNIYQSADGSWVVIAANQDTVFRRLCEAMGRPE
TH_2496|M.thermoresistible__bu GVDQQPLGMSSPAVAPYGAFRTRDGQTVVLGTTNDREWQRLARDIIERPD
. . : *
MMAR_4031|M.marinum_M AVTALAEALGVDFDAEGDRYRYRSVLNGLFAAWFADHTAEQIGAALSATT
MUL_3896|M.ulcerans_Agy99 AVTALAEALGVDFDAEGDRYRYRSVLNGLFAAWFADHRAEQIGAALSATT
MAV_1574|M.avium_104 AVSALADALGVDFGSEGERYRYRDVLSGLFATWFGDHTADEITAALSHTT
Mflv_4144|M.gilvum_PYR-GCK SVAALSRSLDVDFSDEGERYRHREALGGLYAEWFSAHTGAEISAALSETS
Mvan_2197|M.vanbaalenii_PYR-1 AVAVLADSLGADFSDEGERYRHREALSGLFAEWFTSHTGVEVAAALSATS
MSMEG_2468|M.smegmatis_MC2_155 AVAALGEALGADFTDEGQRYTHRDALTGLFTLWFSEHTADEITEALSGTS
Mb1897|M.bovis_AF2122/97 LAN------DPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAG
Rv1866|M.tuberculosis_H37Rv LAN------DPRFGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAG
MAB_4651c|M.abscessus_ATCC_199 LSS------DARFANHVARGRNQDDLDAIIAQWAAQRLPTDIIDVLSAAG
TH_2496|M.thermoresistible__bu LAD------DPAYATNSDRVRHRDVLNEAIAAWCARHDLAHIQKTADDAG
. : * :. * : * : . . . :
MMAR_4031|M.marinum_M VLFERYRTFAEVAADPKVTANPLFSQLSQPGVGDYLAPGLPTAFDGCHPA
MUL_3896|M.ulcerans_Agy99 VLFERYRTFAEVAADPKVTANPLFSQLSQPGVGDYFAPGLPTAFDGCHPA
MAV_1574|M.avium_104 VLFERYRTFAEVAAGPKVTANPLFSRLHQPGLGDYFAPGLPAAFDGTHPA
Mflv_4144|M.gilvum_PYR-GCK VLWERYQTFAETAADARVTDNPLFTELDQPRVGTHLAAGLPVSIDGVYPR
Mvan_2197|M.vanbaalenii_PYR-1 VLWERYQTFGETAAAPRVTDNPLFTELDQPRVGRYLAAGLPLSINGAYPA
MSMEG_2468|M.smegmatis_MC2_155 VLWERYRTFAQTAGDRRVTDNPLFTPLDQPRIGRYLAPGLPVSIGGVYPA
Mb1897|M.bovis_AF2122/97 VAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQ
Rv1866|M.tuberculosis_H37Rv VAAGPMNRPSDILEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQ
MAB_4651c|M.abscessus_ATCC_199 VIAGPINTVADVVQDPQLKAREMLVEHFDERLGRSVLGPGVVPVLSESPG
TH_2496|M.thermoresistible__bu IGNSRYNLPSEVVAHPHLSARDRWRPVDTPNGQITALRPPPVIEGFEQPM
: . .: :: . *
MMAR_4031|M.marinum_M GAPAP---ALGEHTADVLTEYLGLTTADIARLASAKTIGGPDGQQDKEYA
MUL_3896|M.ulcerans_Agy99 GAPAP---ALGEHTADVLTEYLGLTTADTARLASAKTIGGPDGQQDKEYA
MAV_1574|M.avium_104 GAPAP---ALGQDTAEVLAR-LGLTAADIERLADAKTIAC----------
Mflv_4144|M.gilvum_PYR-GCK AVPAP---ALGDDTDSVLGDWLSLDAARIDELRETGTVA-----------
Mvan_2197|M.vanbaalenii_PYR-1 AVPAP---ALGDDTAAVLGDWLAMDRGRIDDLFGAGTVA-----------
MSMEG_2468|M.smegmatis_MC2_155 AVAAP---ALGDDTAAVLAEHLGLSAEKIAELTESGTVATGSAQK-----
Mb1897|M.bovis_AF2122/97 APQRP-APLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA-----
Rv1866|M.tuberculosis_H37Rv APQRP-APLPGQDSVQICRKLLGMTADETERLINERVMFGPAVTA-----
MAB_4651c|M.abscessus_ATCC_199 GVRNAGPARPGQDNDDVYVGLLGKSAQDIERLRAEGVL------------
TH_2496|M.thermoresistible__bu GPVPG----LGQHTDAVLSGLLGMTDDEIAALREQGAIGPAYN-------
. *:.. : *. * .: