For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MASITRNAQANRRQRREQMECRLLEATERLMNNGASFTELSVDRLATEAGISRASFYIYFDDKGHLLRRL AGQVFDDLATGAQHWWDVAWRHDPDDVRAAMRAIIARYRRHQPILIALNEMAGYDPQTAQTYRDILTAIS ARLARVIEDGQADGSIRPELSATTTANALTWMVERTCHQNLPSRPPEFDAELADTLSEIVWGALYLTSTS LR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3762 | - | - | 100% (212) | AcrR family transcriptional regulator |
M. marinum M | MMAR_5405 | ethR | 2e-09 | 25.38% (197) | TetR family transcriptional regulator |
M. marinum M | MMAR_1635 | - | 8e-08 | 23.81% (147) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3084c | - | 5e-09 | 27.94% (136) | TetR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_2639 | - | 6e-80 | 69.71% (208) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv3058c | - | 5e-09 | 27.94% (136) | TetR family transcriptional regulator |
M. leprae Br4923 | MLBr_00064 | - | 3e-09 | 24.12% (199) | putative transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0984c | - | 2e-12 | 26.24% (202) | TetR family transcriptional regulator |
M. avium 104 | MAV_1733 | - | 7e-86 | 72.90% (214) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_4622 | - | 1e-87 | 74.29% (210) | transcriptional regulator, TetR family protein |
M. thermoresistible (build 8) | TH_2600 | - | 8e-12 | 26.83% (205) | PUTATIVE putative transcriptional regulator, TetR family |
M. ulcerans Agy99 | MUL_3708 | - | 1e-119 | 99.06% (212) | AcrR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_5684 | - | 6e-08 | 25.96% (208) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3762|M.marinum_M MASITRNA------------QANRRQRR---EQMECRLLEATERLMNNGA MUL_3708|M.ulcerans_Agy99 MASITRNA------------QANRRQRR---EQMECRLLEATERLMNNGA MAV_1733|M.avium_104 MPSVTRTPPG--------RRSPGREQRR---EQLERRLLDATERLMRDGA MSMEG_4622|M.smegmatis_MC2_155 MPSVTRKP------------QANREERR---ERIERALLDATDRLMSDGT Mflv_2639|M.gilvum_PYR-GCK MPSVTRKA------------QATRQERR---EQIERRLLEATDRLMADGA MLBr_00064|M.leprae_Br4923 MINSTAGQTS---------QSRSRRSTRPSGDDRELAILATAEQLLED-R Mvan_5684|M.vanbaalenii_PYR-1 MRSSTRCKVSPVTATSPTRPARGRRAARPSGDDRELAILETAERLLAD-R MAB_0984c|M.abscessus_ATCC_199 MTKP---------------ATRGRKTTRPSGDERIQAILATAEELLGK-R Mb3084c|M.bovis_AF2122/97 MTSHAADE------------KQAAPPMRRRGDRHRQAILRAARELLEE-T Rv3058c|M.tuberculosis_H37Rv MTSHAADE------------KQAAPPMRRRGDRHRQAILRAARELLEE-T TH_2600|M.thermoresistible__bu MSKPRVRN------------RYSSGPTR--GEQRRERLLQALEDLLAS-R * . * : :* : *: . MMAR_3762|M.marinum_M SFTELSVDRLATEAGISRASFYIYFDDKGHLLRRLAGQVFDDLATGAQHW MUL_3708|M.ulcerans_Agy99 SFTELSVDRLATEAGISRASFYIYFDDKGHLLRRLAGQVFDDLATGAQHW MAV_1733|M.avium_104 SFTELSVDRLAGAAGISRASFYIYFEDKGHLLRRLASRVFGELTDGARRW MSMEG_4622|M.smegmatis_MC2_155 SFTELSVDRLATEAGISRASFYIYFEDKGHLLRRLAAQVFDDLAHEAQQW Mflv_2639|M.gilvum_PYR-GCK SITELSVDRLASEAGISRASFYIYFEDKGHLLRRLASQVFGDLADAAQRW MLBr_00064|M.leprae_Br4923 PLTEISVDYLAKSAGISRPTFYFYFASKEAVLLTLLDRVFNKANAALETL Mvan_5684|M.vanbaalenii_PYR-1 SLAEISVDDLAKGAGISRPTFYFYFASKDAVLLTLLERVIAEADAALAQL MAB_0984c|M.abscessus_ATCC_199 PLADVSVDDLARGAGISRPTFYFYFSSKESVLLTLAERIIEEADANVASI Mb3084c|M.bovis_AF2122/97 PFAELSVRAISLRAGVARSGFYFYFDSKYSVLAQILAEATEELEEASQHF Rv3058c|M.tuberculosis_H37Rv PFAELSVRAISLRAGVARSGFYFYFDSKYSVLAQILAEATEELEEASQHF TH_2600|M.thermoresistible__bu PFAAIEVGDIARAAGLSRSAFYFYFPSKAAAVGAMLGDVFGEISDVLDKW .:: :.* :: **::*. **:** .* : : . MMAR_3762|M.marinum_M WDVAWRHDPDDVR--AAMRAIIARYRRHQPILIALNEMAGYDPQTAQTYR MUL_3708|M.ulcerans_Agy99 WDVAWRHDPDDVR--AAMCAIIARYRRHQPILIALNEMAGYEPQTAQTYR MAV_1733|M.avium_104 WSVAGRHDPDDVR--AAMTRIIATYRRHQAVLVALNEMSGYDPLTAQTYR MSMEG_4622|M.smegmatis_MC2_155 WGVAGRRNPGDVH--TAMSGIIASYRRHQPVLVALNEMSAYDPLVAQTYR Mflv_2639|M.gilvum_PYR-GCK WSVASRLDPEDVR--VAMAAIIAAYRQHQPVLVALNEMAPYDPAVAETYR MLBr_00064|M.leprae_Br4923 IKNRDNKRGNKWR--TGINVFFETFGSHKAVTCAGQ-VTRDNTEVRKLWS Mvan_5684|M.vanbaalenii_PYR-1 IAERSSDRRTIWR--RGINVFFETFGAHRAVCATTVGVKSTNSEARELWS MAB_0984c|M.abscessus_ATCC_199 DPAAMTSPAQYWR--AVIKAYFDAFGSHRALTVALSSMQGTSPELDQRWS Mb3084c|M.bovis_AF2122/97 SARQPGESPEQFVN-RMIGSVAAVYANNDPVLRACNAARQSDMEIRDILE Rv3058c|M.tuberculosis_H37Rv SARQPGESPEQFVN-RMIGSVAAVYANNDPVLRACNAARQSDMEIRDILE TH_2600|M.thermoresistible__bu TELGDSVAARRREVYDSFERVVAIWRQHAPLMAAMFDAASTDAEVRAMFE : : : .: : . MMAR_3762|M.marinum_M DILTAISARLARVIEDGQADGSIRPELSAT-TTANALTWMVERTCHQNLP MUL_3708|M.ulcerans_Agy99 DILTAISARLARVIEDGQADGSIRPELSAT-TTANALTWMVERTCHQNLP MAV_1733|M.avium_104 EILTGISGQLTRVIEDGQADGSIRPRLAAA-TTASALTWMVERACQQNLP MSMEG_4622|M.smegmatis_MC2_155 DLLTGISAQLARVIDEGQADGSIRAQLPAE-TTASTLTWMVERTCHQNLP Mflv_2639|M.gilvum_PYR-GCK DLIAEISTRFEAVIVEGQKAGTIRPQLPPD-ITAHTLVLMVERTCQQNLP MLBr_00064|M.leprae_Br4923 TFMQKWISYTAAVIDAERKRGVAPDTLPAT-ELATALNLMNERALFASFT Mvan_5684|M.vanbaalenii_PYR-1 RSMQRWIDHIAAVIEAERADGAAPVTVPAR-ELSTALNLMNESVMTATFT MAB_0984c|M.abscessus_ATCC_199 EVTENWVANTTVGIEAERARGAAPSVVPAR-DIAIALNLINQAMMRATFT Mb3084c|M.bovis_AF2122/97 RQFQVLLRETIGVFEAEVKAGTAHPISEDLPTLVRTLAATTALMLTGDAL Rv3058c|M.tuberculosis_H37Rv RQFQVLLRETIGVFEAEVKAGTAHPISEDLPTLVRTLAATTALMLTGDAL TH_2600|M.thermoresistible__bu GHIDSFVDGSAARIRHERAVGEAPDGPDPE-ALARVLVGMNVKALERDMR : * .* MMAR_3762|M.marinum_M S-RPPEF-DAELADTLSEIVWGALYLTSTSLR- MUL_3708|M.ulcerans_Agy99 S-RPPEF-DAELADTLSEIVWGALYLTSTSLR- MAV_1733|M.avium_104 A-QPSAY-DAELADTLAEIVWGALYLKPASGS- MSMEG_4622|M.smegmatis_MC2_155 S-RPASY-DAELADTLTEIVWGALYLRPASTDR Mflv_2639|M.gilvum_PYR-GCK S-RPTSF-DTELADVLTEIVWGSLYLTNPAG-- MLBr_00064|M.leprae_Br4923 AEQPHVP-ESRVLDTLVHIWVSSIYNEIR---- Mvan_5684|M.vanbaalenii_PYR-1 GHQPAIP-DDRVLDNLVHIWTTSIYGKTD---- MAB_0984c|M.abscessus_ATCC_199 GQQPAVD-DGKVVDTLLHVWLNAIYGGVCANS- Mb3084c|M.bovis_AF2122/97 LVGPDSD-AARRVRVLEQMWLNALWGGGKAP-- Rv3058c|M.tuberculosis_H37Rv LVGPDSD-AARRVRVLEQMWLNALWGGGKAP-- TH_2600|M.thermoresistible__bu AITSGAPADADLPRVLAFVWGRVLYDA------ . * : ::