For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SGNPFRGMSRREFIAKMTGAGAAALLMDYAGPVIEKAYGAGPCSGQLTDIEHIVLLMQENRSFDHYFGTL SSIRGFSDPSPAFQQKGWNPRTQALDPAGTTIPFRLDTTRGPFLDGECVNDPEHQWTAMHLSWNGGANDN WLPAQANTRTGPYVPMTMGYYTRQDIPIHHLLADTFTICDGYHCSLLTGTLPNRLYWMSAWNDPAGTNGG PQLVEPGFLPLHQYSWRIMPENLEDAGVSWKVYQNKDAGRFINTPISNNGLVQAFKQSGDPRSNLARYGI APGYPVDFAADVKANRLPKVSWLVPNFLQSEHPALPVALGAVAMVTALRILLSNPAVWEKTALIISYDEN GGFFDHVTPPTAPPGTPGEWVTVPDINSVPGSGGIRGPLGLGFRVPCIVVSPFSRGGLMVHDIFDHTSQL KLISKRFDVPVPNLTAWRDGVVGDMTSTFNFATPPNPSRPNLSHPLLAAVPKLPQCIPNVVLGTSDGTFP AIPYRVPYPQSMPGQESTPVRGVPSGLCV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3657 | plcB_4 | - | 100% (520) | membrane-associated phospholipase C 2 PlcB_4 |
M. marinum M | MMAR_0284 | plcB_3 | 0.0 | 72.94% (521) | membrane-associated phospholipase C 2 PlcB_3 |
M. marinum M | MMAR_3823 | plcB_1 | 0.0 | 70.58% (520) | membrane-associated phospholipase C 2 PlcB_1 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1784c | plcD | 0.0 | 69.36% (519) | phospholipase C 4 PLCD |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2351c | plcA | 0.0 | 87.08% (511) | membrane-associated phospholipase C |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0555 | - | 7e-92 | 38.93% (506) | non-hemolytic phospholipase C |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2799 | plcB | 0.0 | 69.26% (514) | membrane-associated phospholipase C 2 PlcB |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3657|M.marinum_M MSGNPFRGMSRREFIAKMTGAGAAALLMDYAGPVIEKAYG-AGPCSGQLT Rv2351c|M.tuberculosis_H37Rv --------MSRREFLTKLTGAGAAAFLMDWAAPVIEKAYG-AGPCPGHLT MUL_2799|M.ulcerans_Agy99 --------MSRREFMAKLAAASSAGAMMSLAGPVIEKAYG-AGPCSGHLT Mb1784c|M.bovis_AF2122/97 MSQSHIGGVSRREFLAKVAAGG-AGALMSFAGPVIEKAYG-AGPCSGHLT MAB_0555|M.abscessus_ATCC_1997 -----MSPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSLR ::**.:::. :. . . :. . :::. . ..* .* * MMAR_3657|M.marinum_M DIEHIVLLMQENRSFDHYFGTLSSIRGFSDPSPAFQQKGWNPRTQA--LD Rv2351c|M.tuberculosis_H37Rv DIEHIVLLMQENRSFDHYFGTLSSTNGFNAASPAFQQMGWNPMTQA--LD MUL_2799|M.ulcerans_Agy99 DIEHFVFMLQENRSFDHYFGSLSGINGFDTPSSAFQQKGWNPQTQS--ID Mb1784c|M.bovis_AF2122/97 DIEHFVFFMQENRSFDHYFGTLSGTDGFNTVSPLFQQKGWNPMTQA--LD MAB_0555|M.abscessus_ATCC_1997 DVEHVVVLMMENRSFDHYFGTLSGVRGFDDPTAVTLSTGKSVFHQPDPQN *:**.*.:: **********:**. **. :. . * . *. : MMAR_3657|M.marinum_M PAGTTIPFRLDTTRGPFLDGECVNDPEHQWTAMHLSWNGGANDNWLPAQA Rv2351c|M.tuberculosis_H37Rv PAGVTIPFRLDTTRGPFLDGECVNDPEHQWVGMHLAWNGGANDNWLPAQA MUL_2799|M.ulcerans_Agy99 PAGVTIPYRFDTTRGPLLNGACANDPGHQWIDMHRAFNNGANDNWLGAQA Mb1784c|M.bovis_AF2122/97 ATGVTMPYRFDTTRGPFLDGACVNDPDHSWVAMHESWNGGVNDNWLPAQA MAB_0555|M.abscessus_ATCC_1997 PDGYLLPFHLDTAVNSVQK---IPTTSHAWSVQHDSWNHGKMDNWMAAHR . * :*:::**: ... . . * * * ::* * ***: *: MMAR_3657|M.marinum_M NTRTGP-YVPMTMGYYTRQDIPIHHLLADTFTICDGYHCSLLTGTLPNRL Rv2351c|M.tuberculosis_H37Rv TTRAGP-YVPLTMGYYTRQDIPIHYLLADTFTICDGYHCSLLTGTLPNRL MUL_2799|M.ulcerans_Agy99 QAQTLQGNVPVTMGYYTRQDQPIHYLLADTFTICDGYHCSLIGGTSPNRL Mb1784c|M.bovis_AF2122/97 KTRSAA-HTPTVMGYYTRQDIPIHYLLADAFTVCDRYFCSVLGPTLPNRL MAB_0555|M.abscessus_ATCC_1997 KADGEH--YPYVMGYYERADIPFHFALAEAFTVCDNFHSSVMGPTWPNRM : * .**** * * *:*. **::**:** :..*:: * ***: MMAR_3657|M.marinum_M YWMSAWNDPAGTNGGPQLVEPGFLPLHQYSWRIMPENLEDAGVSWKVYQN Rv2351c|M.tuberculosis_H37Rv YWLSANIDPAGTDGGPQLVEPGFLPLQQFSWRIMPENLEDAGVSWKVYQN MUL_2799|M.ulcerans_Agy99 YWMSAWVDPNGEQGGPLLVDPNIQPQGRFSWRTMPDNLSDAGISWKVYQN Mb1784c|M.bovis_AF2122/97 YWLSATIDPDGQNGGPELQSPTFQPVRRFGWRIMPQNLSDAGVSWKVYRN MAB_0555|M.abscessus_ATCC_1997 MWMTGTIDPDAAHGGPIIRNTPVS--GGYGWTTYAERLEAAGVSWRVYAE *::. ** . .*** : .. . :.* .:.*. **:**:** : MMAR_3657|M.marinum_M KDAGRFINTPISNNGLVQAFKQSGDPRSNLARYGIAPGYPVDFAADVKAN Rv2351c|M.tuberculosis_H37Rv KGLGRFINTPISNNGLVQAFRQAADPRSNLARYGIAPTYPGDFAADVRAN MUL_2799|M.ulcerans_Agy99 KLLGALNNTVIGYDGMLNDFVQARDPRSNMARYGIAPTYPLDFVADVASN Mb1784c|M.bovis_AF2122/97 KTLG-PISSVLTYGSLVTSFKQSADPRSDLVRFGVAPSYPASFAADVLAN MAB_0555|M.abscessus_ATCC_1997 EDDYGGCNVLK----LFSRFQRSR-PGEPLYDKGIAPVRATQFEDDARAG : . :. * :: * . : *:** . .* *. :. MMAR_3657|M.marinum_M RLPKVSWLVPNFLQSEHPALPVA--LGAVAMVTALRILLSNPAVWEKTAL Rv2351c|M.tuberculosis_H37Rv RLPKVSWLVPNILQSEHPALPVA--LGAVSMVTALRILLSNPAVWEKTAL MUL_2799|M.ulcerans_Agy99 RLPQVSWVLPGFQVSEHPGVPVAPAVGGTAIVNILRILLSNPAVWEKTAL Mb1784c|M.bovis_AF2122/97 RLPRVSWVIPNVLESEHPAVPAA--AGAFAIVNILRILLANPAVWEKTAL MAB_0555|M.abscessus_ATCC_1997 RLPAVSWLIMTSTASEHPDYRPA--DGAAYIASKIDAIAANPEVWAKTVF *** ***:: **** * *. :.. : : :** ** **.: MMAR_3657|M.marinum_M IISYDENGGFFDHVTPPTAPPGTPGEWVTVPDINSVPGSGGIRGPLGLGF Rv2351c|M.tuberculosis_H37Rv IVSYDENGGFFDHVTPPTAPPGTPGEFVTVPNIDAVPGSGGIRGPLGLGF MUL_2799|M.ulcerans_Agy99 IVSFDENGGFFDHVTPTTAPEGTPGEWITVPDINAVTGSGGIRGPIGLGY Mb1784c|M.bovis_AF2122/97 IVSYDENGGFFDHVVPATAPAGTPGEYVTVPDIDQVPGSGGIRGPIGLGF MAB_0555|M.abscessus_ATCC_1997 ILNYDENDGLFDHVVPPTPPPGTPGEWVKG-------------VPIGGGF *:.:***.*:****.*.*.* *****::. *:* *: MMAR_3657|M.marinum_M RVPCIVVSPFSRGGLMVHDIFDHTSQLKLISKRFDVPVPNLTAWRDGVVG Rv2351c|M.tuberculosis_H37Rv RVPCIVISPYSRGPLMVSDTFDHTSQLKLIRARFGVPVPNMTAWRDGVVG MUL_2799|M.ulcerans_Agy99 RVPCFVISPYSRGPLMVHDIFDHTSQLRLLEQRFGVPVPNLTTWRRGVTG Mb1784c|M.bovis_AF2122/97 RVPCFVISPYSRGPQMVHDTFDHTSQLRLLETRFGVPVPNLTAWRRSVTG MAB_0555|M.abscessus_ATCC_1997 RVPAIVISPWSVGGWVAGESFDHTSVLRFLEEFTGVREPNISGWRRKTFG ***.:*:**:* * :. : ***** *::: .* **:: ** . * MMAR_3657|M.marinum_M DMTSTFNFATPPNPSRPNLSHPLLAAVPKLPQCIPNVVLGTSDGTFPAIP Rv2351c|M.tuberculosis_H37Rv DMTSAFNFATPPNSTRPNLSHPLLGALPKLPQCIPNVVLGTTDGALPSIP MUL_2799|M.ulcerans_Agy99 DMTSTFNFAVPPNASPPNLDHPALKAVPQQVQCVPDTVTVFTK-TVP--P Mb1784c|M.bovis_AF2122/97 DMTSTFNFAVPPNSSWPNLDYPGLHALSTVPQCVPNAALGTINRGIP--- MAB_0555|M.abscessus_ATCC_1997 NLLSAFGFDSPVRPAPELPDTAAVVAAADRTDTRP-------PPVIP--- :: *:*.* * ..: . . : * . : * .* MMAR_3657|M.marinum_M YRVPYPQSMPGQES-TPVRGVPSGLCV Rv2351c|M.tuberculosis_H37Rv YRVPYPQVMPTQET-TPVRGTPSGLCS MUL_2799|M.ulcerans_Agy99 YRVPFPQVMPSQET-SPTRGIPSGPC- Mb1784c|M.bovis_AF2122/97 YRVPDPQIMPTQET-TPTRGIPSGPC- MAB_0555|M.abscessus_ATCC_1997 ---PAPQTSPVQEPGSRPRRYPRR--- * ** * **. : * *