For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_2944 (-)

annotation: PPE family protein
coordinates: 3551272 - 3552981
length: 569

TAPIWMAAPPEVHSALLSSGPGPGSLLVAAGEWTSLSITYAEAAEELAALLAAVQAGAWDGPTAEIYVAA
HVPYLMWLIQASANSAAMAGQQQTAAAAYTAALAAMPTLAELGANHTIHTGLVVTNFFGINTIPIAVNEA
DYVRMWIQAAAVMGGYQDVSATAVAAAPQPAPAPPIMNAAAPAAAAAQAAELPPDRQSQFLQWLKDIGYV
DLYNKLIKPFVDWLANIPFLQALFSGFDPYLLTLGNPLTYLSPLNIAFALGYPMDFATYVTLLSQTFAFI
GADLAAAFASGNPMTIGLTILFTSVEAIGTIITDTIALLKTLLEQTAVLLAALAPMLAAPLVPLAAGAVL
VPLGAKGLAALVAVPPPALPVAAPAAPPVALTPNVPPTPPAPAPVDASTLTLTQAPPPPPSTAPPPVSGA
GLGVGMENFGYMVGGLGADAKSAARASARKKAPRPDGAEVPVVAPAPSEPARSQRRRRTKVGQLGRGFEY
MDLESETAPDSMTGSERITTASGLAGSAGTFGFSGVAGKSGDRTAAGLIKLAGDGYDDGPRTPAMPSTWD
GDPAPSPD*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_2944--100% (569)PPE family protein
M. marinum MMMAR_0538-6e-9841.48% (581) PPE family protein, PPE3
M. marinum MMMAR_1418-5e-9541.65% (581) PPE family protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0262cPPE20.062.54% (574) PPE family protein
M. gilvum PYR-GCKMflv_0325-5e-8437.71% (586) PPE protein
M. tuberculosis H37RvRv0256cPPE20.062.54% (574) PPE family protein
M. leprae Br4923MLBr_01828PPE1e-15852.26% (574) PPE-family protein
M. abscessus ATCC 19977MAB_4783-6e-8438.20% (568) PPE family protein
M. avium 104MAV_1329-1e-17556.64% (565) PPE family protein
M. smegmatis MC2 155MSMEG_0619-7e-9141.24% (582) PPE family protein
M. thermoresistible (build 8)TH_3569-6e-6953.90% (269) PUTATIVE PPE protein
M. ulcerans Agy99MUL_1202-5e-9641.25% (577) PPE family protein
M. vanbaalenii PYR-1Mvan_0415-2e-8237.86% (589) PPE protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb0262c|M.bovis_AF2122/97           ----------MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIA
Rv0256c|M.tuberculosis_H37Rv        ----------MTAPIWMASPPEVHSALLSSGPGPGPLLVSAEGWHSLSIA
MLBr_01828|M.leprae_Br4923          ----------MSAPIWMASPPEVHSALLSRGPGSGPLLVAAEAWRSLSSV
MMAR_2944|M.marinum_M               ----------MTAPIWMAAPPEVHSALLSSGPGPGSLLVAAGEWTSLSIT
MAV_1329|M.avium_104                -------MRSMTAPIWMASPPEVHSSLLSAGPGPGPLLAAAAAWSSLSVQ
Mflv_0325|M.gilvum_PYR-GCK          MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE
Mvan_0415|M.vanbaalenii_PYR-1       ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE
MSMEG_0619|M.smegmatis_MC2_155      ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE
TH_3569|M.thermoresistible__bu      ---------MMTAPIWMALPPEVHSALLSSGPGPGSLLAAASAWHALSAE
MAB_4783|M.abscessus_ATCC_1997      ----------MTAPVWMAAPPEVHSALLSSGPGPGSLFAAADAWRSLSTE
MUL_1202|M.ulcerans_Agy99           --------------MWFTSPPEVHSALLSSGPGPASLLSGAAAWAGLSTE
                                                  :*:: ******::** ***...:: ..  * .**  

Mb0262c|M.bovis_AF2122/97           YAETADELAALLAAVQAGTWDGPTAAVYVAAHTPYLAWLVQASANSAAMA
Rv0256c|M.tuberculosis_H37Rv        YAETADELAALLAAVQAGTWDGPTAAVYVAAHTPYLAWLVQASANSAAMA
MLBr_01828|M.leprae_Br4923          YAEMADELVALLVVVPVSSWDGSAAEAYVIAYLPYLGWLRQASVDSAVMA
MMAR_2944|M.marinum_M               YAEAAEELAALLAAVQAGAWDGPTAEIYVAAHVPYLMWLIQASANSAAMA
MAV_1329|M.avium_104                YAESADELVTLLGAVRAGDWDGPTAGAYLAAHAPYLAWLVRASTDSAAVA
Mflv_0325|M.gilvum_PYR-GCK          YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA
Mvan_0415|M.vanbaalenii_PYR-1       YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA
MSMEG_0619|M.smegmatis_MC2_155      YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA
TH_3569|M.thermoresistible__bu      YASAAAELSSVLANVQAGSWEGPSAERYVAAHAPYLAWLTQQSANSAATA
MAB_4783|M.abscessus_ATCC_1997      YSSAANELTTTLGSVRAGVWDGASAEQYQTAHVPYLSWLHETSAVSAGVA
MUL_1202|M.ulcerans_Agy99           YASVADELMGVLAAVQGGAWEGLSAELYVAAHVPYLMWLMRASATSAQAA
                                    *:  * **   *  *  . *:* ::  *  *: *** ** . *. .*  *

Mb0262c|M.bovis_AF2122/97           TRQETAATAYGTALAAMPTLAELGANHALHGVLMATNFFGINTIPIALNE
Rv0256c|M.tuberculosis_H37Rv        TRQETAATAYGTALAAMPTLAELGANHALHGVLMATNFFGINTIPIALNE
MLBr_01828|M.leprae_Br4923          AHYETMATAYITTLAMMPTLAELAANRTAHTVLVTTNFFGINTIPIARNE
MMAR_2944|M.marinum_M               GQQQTAAAAYTAALAAMPTLAELGANHTIHTGLVVTNFFGINTIPIAVNE
MAV_1329|M.avium_104                AQQEVAAAAYTAALAAMPTLPELAANHAAHAVLTATNFFGVNTIPIAVNE
Mflv_0325|M.gilvum_PYR-GCK          VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE
Mvan_0415|M.vanbaalenii_PYR-1       AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE
MSMEG_0619|M.smegmatis_MC2_155      VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE
TH_3569|M.thermoresistible__bu      GRHETAAAAYSTALATMPTMAELTLNKTTHAVLVATNFLGINTIPIALNE
MAB_4783|M.abscessus_ATCC_1997      AQTETAATAYSEALATMPTLGELAANHATHGALVATNFFGINTIPIAVNE
MUL_1202|M.ulcerans_Agy99           AQHEAAAAAYTTALAAMPTMPELAANHVIHGVLMATNFFGINTIPIAANE
                                     : :. *:**  :** ***: **  *:. *  *  ***:*:****** .*

Mb0262c|M.bovis_AF2122/97           SDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAPTAASDEP
Rv0256c|M.tuberculosis_H37Rv        SDYARMWIQAATTMASYQAVSTAAVAAAPQTTPAPQIVKANAPTAASDEP
MLBr_01828|M.leprae_Br4923          IDYVRMWVEAAIAMGTYQEVSTVVVDSAPEAIAAPQIMASDALEASSDQP
MMAR_2944|M.marinum_M               ADYVRMWIQAAAVMGGYQDVSATAVAAAPQPAPAPPIMNAAAPAAAAAQA
MAV_1329|M.avium_104                ADYARMWVQAATVMGTYQDVAAAALAATPHTEPAPRVMAAAAPAATAAQS
Mflv_0325|M.gilvum_PYR-GCK          ADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLPGVG-------
Mvan_0415|M.vanbaalenii_PYR-1       ADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAPGVG-------
MSMEG_0619|M.smegmatis_MC2_155      ADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKPGVG-------
TH_3569|M.thermoresistible__bu      ADYVRMWIQAATSMSTYQAVAGTAVMSAPASSPAPLLLAPGVS-------
MAB_4783|M.abscessus_ATCC_1997      ADYIRMWIQAATVMSTYQAVSESSVSAAPPTSPAPPVLSPDSG-------
MUL_1202|M.ulcerans_Agy99           ADYVRMWIQAATTMSTYQAVSAAAVASTPPSTPAPRILAAPAAAHD----
                                     ** ***::**  *. ** *:   : ::* . .** :: .          

Mb0262c|M.bovis_AF2122/97           N--------QVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSG
Rv0256c|M.tuberculosis_H37Rv        N--------QVQEWLQWLQKIGYTDFYNNVIQPFINWLTNLPFLQAMFSG
MLBr_01828|M.leprae_Br4923          SPTAPSQSPQVQNWLQWLQKIGYTDFYNTLVQPLITSLTNHPFFQGMFSG
MMAR_2944|M.marinum_M               AELPPD---RQSQFLQWLKDIGYVDLYNKLIKPFVDWLANIPFLQALFSG
MAV_1329|M.avium_104                SSYPPD---TQDQWLDWLEKTGFVDFYNRYIQPLIDQLMNNPFFQSLFSG
Mflv_0325|M.gilvum_PYR-GCK          ---------------------------------------------EAGRA
Mvan_0415|M.vanbaalenii_PYR-1       ---------------------------------------------EAGRA
MSMEG_0619|M.smegmatis_MC2_155      ---------------------------------------------EAGSA
TH_3569|M.thermoresistible__bu      ---------------------------------------------EAADA
MAB_4783|M.abscessus_ATCC_1997      ---------------------------------------------AAART
MUL_1202|M.ulcerans_Agy99           ------------------------------------------HDHDHGGD
                                                                                      

Mb0262c|M.bovis_AF2122/97           FDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAA
Rv0256c|M.tuberculosis_H37Rv        FDPWLPSLGNPLTFLSPANIAFALGYPMDIGSYVAFLSQTFAFIGADLAA
MLBr_01828|M.leprae_Br4923          FDPWLPSLGNPLSFLSPFNIAFALGTPMDIGSYVGYLSQTFAFIGADLAA
MMAR_2944|M.marinum_M               FDPYLLTLGNPLTYLSPLNIAFALGYPMDFATYVTLLSQTFAFIGADLAA
MAV_1329|M.avium_104                FDPWLPSLGNPLSFLNPFNIAFALGYPMDFGSYFGYLAQMFSFVAADLAA
Mflv_0325|M.gilvum_PYR-GCK          AADMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRFLFEPIFNFLRD
Mvan_0415|M.vanbaalenii_PYR-1       AADVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRFLFEPIFDFLRD
MSMEG_0619|M.smegmatis_MC2_155      SASVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPGGQ-AILDFLKD
TH_3569|M.thermoresistible__bu      MATTQQIGSQATAADSGTALNLSDLIANLLQYYQDYLDQLFGPIVDFLRD
MAB_4783|M.abscessus_ATCC_1997      AA-------QDATKPPPIVPDPNDPIEMLLKNSQHFL-GMYRALKGLITD
MUL_1202|M.ulcerans_Agy99           PTPIDYFVAEVLRIISGGRIIWDPAEGTVNGIPYDDYVNAAQPIWWLVRA
                                             :                                 :   :  

Mb0262c|M.bovis_AF2122/97           AFASGNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPL
Rv0256c|M.tuberculosis_H37Rv        AFASGNPATIAFTLMFTTVEAIGTIITDTIALVKTLLEQTLALLPAALPL
MLBr_01828|M.leprae_Br4923          AFASGNPVTIGFTLLFTTIEAIGTIITDTIALVKTMIEQSFVLLPMILPL
MMAR_2944|M.marinum_M               AFASGNPMTIGLTILFTSVEAIGTIITDTIALLKTLLEQTAVLLAALAPM
MAV_1329|M.avium_104                AFASGNPATIAWTLLFTTIEVIGTVITDTIALIKTLLEQMIVLIPAILPL
Mflv_0325|M.gilvum_PYR-GCK          PIG--NTFALITDFLTNPVQALITWGP-FLLAVVYQAVSWVGASILYPSL
Mvan_0415|M.vanbaalenii_PYR-1       PLG--NTIKLITDFLTNPAQALITWGP-FLAAVAYQAVSWVGASILYPSL
MSMEG_0619|M.smegmatis_MC2_155      PLG--NLGRLLTDFMTNPAGALATWWP-FLFGVAYQVFFNLVGWPTWGMI
TH_3569|M.thermoresistible__bu      PIG--NLFQLIDDFLTNPAGALVTWWP-LLFAVAYQVFTNLVGWPTWAMI
MAB_4783|M.abscessus_ATCC_1997      PVG--TIVRIIIDFSTNPAAAIVTWTP-LFYVFAYAATFAVMGTPIYAAI
MUL_1202|M.ulcerans_Agy99           LEFGQDFQTFIKELFTNPIGAIEFMVELVLFDWPTHIAQIIQALAQSPQL
                                             :   :  ..  .:       :                   :

Mb0262c|M.bovis_AF2122/97           LAAPLAPLTLAPASAAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIP
Rv0256c|M.tuberculosis_H37Rv        LAAPLAPLTLAPASAAGGFAGLSGLAGLVGIPPSAPPVIPPVAAIAPSIP
MLBr_01828|M.leprae_Br4923          LTAPLA---VATAGAAGSFAGLSELAGLVGVAPPGLPSAPPVAAVAPVVP
MMAR_2944|M.marinum_M               LAAPLVP---LAAGAVLVPLGAKGLAALVAVPPPALPVAAPAAPPVALTP
MAV_1329|M.avium_104                LTVSVVP--LVVPTLVGGLAGLTGLAGLHAIPVPPFVPAPTLVPVALAPS
Mflv_0325|M.gilvum_PYR-GCK          FLLPLL----ATTLAIVAGVGQHLLSLLNTP-PAEEAAEEPAPAQSAPSR
Mvan_0415|M.vanbaalenii_PYR-1       LLLPLV----ATTLAIVLGVGAYLLENLPAP-AEDAPAEEPAASSPAPTR
MSMEG_0619|M.smegmatis_MC2_155      FASPFL----IPALAALGITGLVLLIDHVLNNPVDVPAEDEAPQEVAAAP
TH_3569|M.thermoresistible__bu      LASPVL----IPLAITLGVAGLVMIADQAQP-----PAEEAAPEEDVAAP
MAB_4783|M.abscessus_ATCC_1997      MGP-------AAGISIPLAITLASLSQMPEAPPVDAPAETVPARIDQPHA
MUL_1202|M.ulcerans_Agy99           LAVALG----GVVANLGAISGLAGLSGLAGLHSAALPAAIAPIAPPMPPG
                                    :                       :                         

Mb0262c|M.bovis_AF2122/97           ------TPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA----GI
Rv0256c|M.tuberculosis_H37Rv        ------TPTPTPAPAPAPTAVTAPTPPPGPPPPPVTAPPPVTGA----GI
MLBr_01828|M.leprae_Br4923          PSMPTLASIPTPTPMPAPAASTAPVVTP-PGPPPVTAPPSVTGA----GV
MMAR_2944|M.marinum_M               -------NVPPTPPAPAPVDASTLTLTQAPPPPPSTAPPPVSGAGLGVGM
MAV_1329|M.avium_104                -------PPPAPAPAPSPAPAPAPTSAAAPAAAAPGAPPPTPSGPPVATL
Mflv_0325|M.gilvum_PYR-GCK          PDQQSFPATMSAPPPPSGAPIAANTVSAGSPPAPGAPAAAAATF------
Mvan_0415|M.vanbaalenii_PYR-1       ADQPSPAIAVSAPPPPSSAAATVGTVATGTAPAPGAPAAATASF------
MSMEG_0619|M.smegmatis_MC2_155      RTDQPLAVGISPAGVPGSAATAAAPAPAPAGTTVAAPAPAAATF------
TH_3569|M.thermoresistible__bu      -------------------VRAEPQNPLPLTXXX----------------
MAB_4783|M.abscessus_ATCC_1997      VAMGGAPAPTASTAAP--TPTTTSPATPGSAPAP-TPPPAGAEG------
MUL_1202|M.ulcerans_Agy99           VALAPTVAASVAAPTPPSAPPSAASTVANAAPPPPPAPAAAGFG------
                                                         .                            

Mb0262c|M.bovis_AF2122/97           QSFGYLVGDLNSAAQARKAVGTGVRKK-TPEPDSAEAPAAAAAPEEQVQP
Rv0256c|M.tuberculosis_H37Rv        QSFGYLVGDLNSAAQARKAVGTGVRKK-TPEPDSAEAPAAAAAPEEQVQP
MLBr_01828|M.leprae_Br4923          ESFGYLVGRLPSTARG--VVGTSVRQQ-SSAPDRIEAPDAAATPQEQARS
MMAR_2944|M.marinum_M               ENFGYMVGGLGADAKS--AARASARKK-APRPDGAEVPVVAPAPSEPARS
MAV_1329|M.avium_104                HSLAYLVGGLTADARR--AANAGVRRREAAAPENVEAPAVAQ-PEEESTQ
Mflv_0325|M.gilvum_PYR-GCK          --VPYVVAGRDPYEGFSPTVRDSTGAKAPAGTIPAAASGIAASAAERRKR
Mvan_0415|M.vanbaalenii_PYR-1       --VPYAVAGRDPGTGFSPTVRDSTSAKAPASGIPAAASGVAASAAERRKR
MSMEG_0619|M.smegmatis_MC2_155      --VPYAVANRDPGEGFTPTLGNKSQVAAPASGVPAAASGVAASLASRRKR
TH_3569|M.thermoresistible__bu      --------------------------------------------------
MAB_4783|M.abscessus_ATCC_1997      --LGYAVRGDGPGFGFGPTIGASTGATAHAPSSAVSAAAALACNPATGKS
MUL_1202|M.ulcerans_Agy99           --FPFVVGG-GPGIGYGEGMSASAAASARRKAPEPDSAALAAAAAVREEA
                                                                                      

Mb0262c|M.bovis_AF2122/97           QRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQ----------GAGTLGF
Rv0256c|M.tuberculosis_H37Rv        QRRRRPKIKQLGRGYEYLDLDPETGHDPTGSPQ----------GAGTLGF
MLBr_01828|M.leprae_Br4923          RWRRRAKVTPFDS-----SGSPNPKAAPTASDQ----------GAGTLGL
MMAR_2944|M.marinum_M               QRRRRTKVGQLGRGFEYMDLESETAPDSMTGSERITTASGLAGSAGTFGF
MAV_1329|M.avium_104                RRRHRAAAKQLGRGYEYLDPEPSTTASQL--------------GAPTLGF
Mflv_0325|M.gilvum_PYR-GCK          RRRQKEEIKGRGYADAYADYEELPDDGPPEQPAPRVTASTR--GAGPMGF
Mvan_0415|M.vanbaalenii_PYR-1       RRRQKDEIAGRAYADAYADYEPEPDDEPPVRQEPRIAATER--GAGPMGF
MSMEG_0619|M.smegmatis_MC2_155      RRKKGAQIEERGYADAYMDYEE-PDEDPAPQPEPRVRASER--GSDAMGF
TH_3569|M.thermoresistible__bu      --------------------------------------------------
MAB_4783|M.abscessus_ATCC_1997      RRRRRRTIDDRGYRHEYATMDDHTPTGP--QDPVTAVASGT--GAGRLGF
MUL_1202|M.ulcerans_Agy99           RRRRRKRKTERGYGEEFMDVEVDPDWGGPLDDEP--VASTQ--GAGRLGF
                                                                                      

Mb0262c|M.bovis_AF2122/97           AGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE-----
Rv0256c|M.tuberculosis_H37Rv        AGTTHKASPGQVAGLITLPNDAFGGSPRTPMMPGTWDTDSATRVE-----
MLBr_01828|M.leprae_Br4923          AGTARQASSGPATGLVTLSNGTFSDSPRAPMLPRTWGADPTFCYNAADIG
MMAR_2944|M.marinum_M               SGVAGKSGDRTAAGLIKLAGDGYDDGPRTPAMPSTWDGDPAPSPD-----
MAV_1329|M.avium_104                AGTAANRAAAAPAGLSAPVLDEFADAPRAPMMPATWDGSKQ---------
Mflv_0325|M.gilvum_PYR-GCK          AGT-VSRGDEQAGGLTTLAGDSFGGGPREPMLPGTWDPDATDDRHTDGRD
Mvan_0415|M.vanbaalenii_PYR-1       AGT-VSRDAAQAGGLTTLPGDPFGGGPKAPMLPGTWDPDTEPD------E
MSMEG_0619|M.smegmatis_MC2_155      TGT-VTRHDVTAAGLTTLTGDTFDDRPVTPMLPGTWDGDENPA------P
TH_3569|M.thermoresistible__bu      --------------------------------------------------
MAB_4783|M.abscessus_ATCC_1997      AGVHTATTAVEATGLSTLDGDAEN--RTIPMLPGTWDVTDDDR-------
MUL_1202|M.ulcerans_Agy99           AGTVHSESAATAAGLTTLVADEFGGGPKMPMLPGTWDTDSDAPSD-----
                                                                                      

Mb0262c|M.bovis_AF2122/97           -----------
Rv0256c|M.tuberculosis_H37Rv        -----------
MLBr_01828|M.leprae_Br4923          PAGGWDDE---
MMAR_2944|M.marinum_M               -----------
MAV_1329|M.avium_104                -----------
Mflv_0325|M.gilvum_PYR-GCK          GHDGHDGKEKP
Mvan_0415|M.vanbaalenii_PYR-1       RHNHHDGKDSQ
MSMEG_0619|M.smegmatis_MC2_155      SPDDPEGGPRR
TH_3569|M.thermoresistible__bu      -----------
MAB_4783|M.abscessus_ATCC_1997      -----------
MUL_1202|M.ulcerans_Agy99           -----------