For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTAPIWMASPPEVHSALLSSGPGPGPLLSAAAAWSQLSNEYASAANELTAMLGAVQAGPWEGSSAEQYVA AHLPYVAWLMQASVDTTQAAAQLETAAAAYTTALAAMPTLPELATNHTIHAALTATNFFGINTIPITLNE ADYVRMWIQAATTMSTYQAVSGTALASTPQTAPAPYILKSNAQTEDSQPPVEGSDPLDSLVADILRAITD GRVNWDPVSRTVNGIEYEEYTDAGDPVWWVVRALEFSQDFRTFARLLPTDPQAALQFYGELFLFDYPVHI PQLLTWLSQSPQLLAVALGQAVSGLGAVTGFAGLAGLAAQPIGTVASALGPVAAPADMLPVTSMAPTVTT PVAAPVSATAPAPATALTAGGPPPVPPAAGGAGFSYPYLIGGGPSIGFGSGMSTSASASAKKKTPEPDTA AAAAARERARARRRRRATLRGYGDEFMDIEVDPDWGAPPGEGPGASTVASDHGAGPVGIAGTVHTGSVTP AAGLTTLGGDDFDGEPRMPMLPGTWDPDGARDAGKGS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1418 | - | - | 100% (527) | PPE family protein |
M. marinum M | MMAR_0538 | - | 0.0 | 61.69% (522) | PPE family protein, PPE3 |
M. marinum M | MMAR_0545 | - | e-103 | 43.78% (539) | PPE family protein, PPE4 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0288 | PPE3 | 0.0 | 63.02% (530) | PPE family protein |
M. gilvum PYR-GCK | Mflv_0325 | - | 1e-104 | 44.14% (546) | PPE protein |
M. tuberculosis H37Rv | Rv0280 | PPE3 | 0.0 | 63.02% (530) | PPE family protein |
M. leprae Br4923 | MLBr_00539 | PPE | 1e-126 | 47.38% (534) | PPE-family protein |
M. abscessus ATCC 19977 | MAB_0809c | - | 1e-107 | 45.27% (539) | PPE family protein |
M. avium 104 | MAV_4879 | - | 1e-155 | 56.93% (541) | PPE family protein |
M. smegmatis MC2 155 | MSMEG_0619 | - | 5e-98 | 42.40% (566) | PPE family protein |
M. thermoresistible (build 8) | TH_3113 | - | 3e-71 | 38.68% (517) | PUTATIVE PPE protein |
M. ulcerans Agy99 | MUL_1202 | - | 1e-180 | 61.00% (518) | PPE family protein |
M. vanbaalenii PYR-1 | Mvan_0415 | - | 1e-102 | 44.01% (559) | PPE protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0325|M.gilvum_PYR-GCK MTSPVASLAPVTSPVWMALPPEVHSTMLSSGPGPGSLLAAGVAWQSLSAE Mvan_0415|M.vanbaalenii_PYR-1 ----------MSSPVWMALPPEVHSALLSSGPGPGSMLAAAATWQSLSAE MSMEG_0619|M.smegmatis_MC2_155 ----------MTAPIWMALPPEVHSSLLSSGPGPGSLLAAAGAWQSLSAE Mb0288|M.bovis_AF2122/97 ------------MTLWMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAE Rv0280|M.tuberculosis_H37Rv ------------MTLWMASPPEVHSALLSSGPGPGSVLSAAGVWSSLSAE MUL_1202|M.ulcerans_Agy99 --------------MWFTSPPEVHSALLSSGPGPASLLSGAAAWAGLSTE MMAR_1418|M.marinum_M ----------MTAPIWMASPPEVHSALLSSGPGPGPLLSAAAAWSQLSNE MAV_4879|M.avium_104 ----------MTAPIFMASPPELHSALLSSGPGPASLLAAAGAWSQLSAE MLBr_00539|M.leprae_Br4923 -----------MTNPWMAFPPEVQSAMLNFGAGVGPMLNSASYNLWLSAE MAB_0809c|M.abscessus_ATCC_199 ---------MLAAPVWMASPPEVHSALLSSGPGPGPLLAAAAEWSSLGAH TH_3113|M.thermoresistible__bu ----------------MALPPEVHSTLLRTGPGPGALSAAADAWRMLSDE :: ***::*::* *.* ..: .. *. . Mflv_0325|M.gilvum_PYR-GCK YASAAAELTSILAGVQSGAWEGPSSQQYVAAHTPYLAWLAQQSAVSAATA Mvan_0415|M.vanbaalenii_PYR-1 YAAAAAELSSILADVQAGAWEGPSSEQYVAAHTPYLAWLAQQSAAGAAAA MSMEG_0619|M.smegmatis_MC2_155 YAAAAAELTSVLSAVQAGSWEGPSSEQYVAAHAPYLQWLAQQSANSAAAA Mb0288|M.bovis_AF2122/97 YAAVADELIGLLGAVQTGAWQGPSAAAYVAAHAPYLAWLMRASETSAEAA Rv0280|M.tuberculosis_H37Rv YAAVADELIGLLGAVQTGAWQGPSAAAYVAAHAPYLAWLMRASETSAEAA MUL_1202|M.ulcerans_Agy99 YASVADELMGVLAAVQGGAWEGLSAELYVAAHVPYLMWLMRASATSAQAA MMAR_1418|M.marinum_M YASAANELTAMLGAVQAGPWEGSSAEQYVAAHLPYVAWLMQASVDTTQAA MAV_4879|M.avium_104 YASAAEQLSTLLTGVAAGAWQGVSGESYVGAHAPYLAWLTKASADSAAVA MLBr_00539|M.leprae_Br4923 YRWVASEVEALLREVRSGGWQGQAVEMFVGSCMPFLAWLMKAAADYMDVA MAB_0809c|M.abscessus_ATCC_199 YSATAQELRAILAATHASAWHGPSAETYVAAHTPYLEWLNQGALESNARA TH_3113|M.thermoresistible__bu YRAAAVELAAVVSQTCATAWEGVGADAYAAAHGPYLFWLTDTAAAAAAAG * .* :: :: . *.* . :..: *:: ** : . Mflv_0325|M.gilvum_PYR-GCK VQHDTAAAAYTTALATMPTLPELALNHTTHAVLVGTNFLGINTIPIALNE Mvan_0415|M.vanbaalenii_PYR-1 AQHEAAAAAYSTALATMPTLPELALNHTTHAVLVATNFLGINTIPIAMTE MSMEG_0619|M.smegmatis_MC2_155 VQHETAAAAYSTALATMPTMAELALNHTMHGVLVATNFFGINTIPIALNE Mb0288|M.bovis_AF2122/97 ARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVATNFFGINTIPIALNE Rv0280|M.tuberculosis_H37Rv ARHETVAAAYTTAVAAMPTLVELAANHTLHGVLVATNFFGINTIPIALNE MUL_1202|M.ulcerans_Agy99 AQHEAAAAAYTTALAAMPTMPELAANHVIHGVLMATNFFGINTIPIAANE MMAR_1418|M.marinum_M AQLETAAAAYTTALAAMPTLPELATNHTIHAALTATNFFGINTIPITLNE MAV_4879|M.avium_104 AQHEVAATAYTTALATMPTLPELAANHAVHATLVATNFFGVNTVPIAVNE MLBr_00539|M.leprae_Br4923 TQQEVVAAAYAAAVEAMPTQFELAANRVVRGVLMATNFFGVNTIPIALNE MAB_0809c|M.abscessus_ATCC_199 VQHGAAAGAYSTALAVMPTLAELAANHATHAALVATNFFGINTIPILATE TH_3113|M.thermoresistible__bu AQLEAAAAAHASALAAMPTMAELTANRTTHAALVATNFFGVNTIPIAVNE .: ..* *:::*: .*** **: *:. :..* .***:*:**:** .* Mflv_0325|M.gilvum_PYR-GCK ADYVRMWIQAATTMATYQSVSGAALAATPTSAPAPSVLLPGVG------- Mvan_0415|M.vanbaalenii_PYR-1 ADYVRMWIQAATTMATYQAVSGAALAATPTATPAPFVLAPGVG------- MSMEG_0619|M.smegmatis_MC2_155 ADYVRMWIQAATTMSTYQAVSGAAVAAAPVSAPAPFLLKPGVG------- Mb0288|M.bovis_AF2122/97 ADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAAEAADDDHDHD Rv0280|M.tuberculosis_H37Rv ADYARMWTQAASTMATYQAVAEAAVASAPQTTPAPPILAAEAADDDHDHD MUL_1202|M.ulcerans_Agy99 ADYVRMWIQAATTMSTYQAVSAAAVASTPPSTPAPRILAAPAAA--HDHD MMAR_1418|M.marinum_M ADYVRMWIQAATTMSTYQAVSGTALASTPQTAPAPYILKSNAQT--EDSQ MAV_4879|M.avium_104 ADYARMWTQAATTMSTYHAVSTAAVASTPQAEPAPQIVKSDASQDDSGNE MLBr_00539|M.leprae_Br4923 EEYVQMWVRAATTMATYSAISQSALAATPQATPPPLILKSNVLVDDVEKD MAB_0809c|M.abscessus_ATCC_199 ADYVRMWVQAATTMATYQTASEVALASAPPSTPPPSILH--------DHD TH_3113|M.thermoresistible__bu ADYARMWIQAATTMATYEAVASAAVSATPRTVAPPPILGAGTGESATAAI :*.:** :**:**:** : : *::::* : ..* :: Mflv_0325|M.gilvum_PYR-GCK ------EAGRAAADMSAFAAQPMAAQAGAAFDVSNIIADIIRLYGEVLRF Mvan_0415|M.vanbaalenii_PYR-1 ------EAGRAAADVTAFAAQAQAAEAGSALDLSNIIADLIRAYGELLRF MSMEG_0619|M.smegmatis_MC2_155 ------EAGSASASVQQMSAQATAAESGSSLDLSSIISDLLNQYLQGVPG Mb0288|M.bovis_AF2122/97 H-----DHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD Rv0280|M.tuberculosis_H37Rv H-----DHGGEPTPLDYLVAEILRIISGGRLIWDPAEGTMNGIPFEDYTD MUL_1202|M.ulcerans_Agy99 H-----DHGGDPTPIDYFVAEVLRIISGGRIIWDPAEGTVNGIPYDDYVN MMAR_1418|M.marinum_M P-----PVEG-SDPLDSLVADILRAITDGRVNWDPVSRTVNGIEYEEYTD MAV_4879|M.avium_104 D-----HDPKIDNPFNDFIANILRNLG---IDWDPAKGTVNGLDYDAYTN MLBr_00539|M.leprae_Br4923 SRHDGHSHGGHASAMDRVFADILRNVSGGRLVWDPLNGTLNGLDYDDYVY MAB_0809c|M.abscessus_ATCC_199 H--------GHDD-------------------HDHEHGHDDDHGHGD-LD TH_3113|M.thermoresistible__bu TG--AHVTAELRAAESRTLLDEINELIDRLFAPLFPPGFADALPDGLLGT Mflv_0325|M.gilvum_PYR-GCK LFEPIFNFLR---DPIGNTFALITDFLTNPVQALITWGPFLLAVVYQA-- Mvan_0415|M.vanbaalenii_PYR-1 LFEPIFDFLR---DPLGNTIKLITDFLTNPAQALITWGPFLAAVAYQA-- MSMEG_0619|M.smegmatis_MC2_155 G-QAILDFLK---DPLGNLGRLLTDFMTNPAGALATWWPFLFGVAYQVFF Mb0288|M.bovis_AF2122/97 AAQPIWWVVRA-IEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIV Rv0280|M.tuberculosis_H37Rv AAQPIWWVVRA-IEFSKDFETFVQELFVNPVEAFQFYFELLLFDYPTHIV MUL_1202|M.ulcerans_Agy99 AAQPIWWLVRA-LEFGQDFQTFIKELFTNPIGAIEFMVELVLFDWPTHIA MMAR_1418|M.marinum_M AGDPVWWVVRA-LEFSQDFRTFARLLPTDPQAALQFYGELFLFDYPVHIP MAV_4879|M.avium_104 AGEPIFWVVRA-LELLEDFEQFGYYLVHNPALAFQYLVQLMLFDWPTHIL MLBr_00539|M.leprae_Br4923 PGQPIWWLARG-LEFFQDGEQFWELLFINPTAAFQFLLYIVVLDLPTHIV MAB_0809c|M.abscessus_ATCC_199 PTDPEWWVHVA-GEMVEHFELLLNNLLTDP-AALLTNLPMVLADVAFHAA TH_3113|M.thermoresistible__bu LLAPLLPGATGDGPPMATIMSFLLMGLSNPAYLFPVLVYLLFTGVVHTTV . : :* : :. Mflv_0325|M.gilvum_PYR-GCK --VSWVGA-SILYPSLFLLPLLATT--LAIVAGVGQHLLSLLNTPPAEEA Mvan_0415|M.vanbaalenii_PYR-1 --VSWVGA-SILYPSLLLLPLVATT--LAIVLGVGAYLLENLPAPAEDAP MSMEG_0619|M.smegmatis_MC2_155 NLVGWPTW-GMIFASPFLIPALAALGITGLVLLIDHVLNNPVDVPAEDEA Mb0288|M.bovis_AF2122/97 QIVEALSQ-SPQLLAVALGSVISNLGAVTGFAGLS-GLAGMQP-AAIPAL Rv0280|M.tuberculosis_H37Rv QIVEALSQ-SPQLLAVALGSVISNLGAVTGFAGLS-GLAGMQP-AAIPAL MUL_1202|M.ulcerans_Agy99 QIIQALAQ-SPQLLAVALGGVVANLGAISGLAGLS-GLAGLHS-AALPA- MMAR_1418|M.marinum_M QLLTWLSQ-SPQLLAVALGQAVSGLGAVTGFAGLA-GLAAQPIGTVASAL MAV_4879|M.avium_104 EIFMSQ----PELLAPALLLAAAPFAAVGGFAGLA-GLAALPQPVAVPAA MLBr_00539|M.leprae_Br4923 QLGTWLAE-YPQLLLVALGGTIANLGAVTGLAGLSSGLSAGPS-AAIPTV MAB_0809c|M.abscessus_ATCC_199 QLASTIGQFAPALIQPALALAIANLGWAAGFAGLA-GIQPSPEILAVEPG TH_3113|M.thermoresistible__bu AVSGMLAQLVPLMPALLPVAVAALGGLAGVWAGLS-GLAGLAGLTAVPAA : : : Mflv_0325|M.gilvum_PYR-GCK AEEPAPAQS-----APSRPDQQSFPATMSAPPPPSGAPIAANTVSAGSPP Mvan_0415|M.vanbaalenii_PYR-1 AEEPAASSP-----APTRADQPSPAIAVSAPPPPSSAAATVGTVATGTAP MSMEG_0619|M.smegmatis_MC2_155 PQEVAAAP---------RTDQP-LAVGISPAGVPGSAATAAAPAPAPAGT Mb0288|M.bovis_AF2122/97 APVAAAPP------TLPAVAMAPTMAAPGAAVASAAAPASAPAASTVASA Rv0280|M.tuberculosis_H37Rv APVAAAPS------TLPAVAMAPTMAAPGAAVASAAAPASAPAASTVASA MUL_1202|M.ulcerans_Agy99 AIAPIAPP------MPPGVALAPTVAASVAAPTPPSAPPSA--ASTVANA MMAR_1418|M.marinum_M GPVAAPAD------MLPVTSMAPTVTTPVAAPVSATAPAPA--TALTAGG MAV_4879|M.avium_104 VAAPPAPPG-----LPPAIAIAPTPVAAAAPVATAPAPAPAATATTVAGA MLBr_00539|M.leprae_Br4923 VPESAPIAT-----VPAMLAGAGVAPAVVAPGASPSSAAPPASAASAAAA MAB_0809c|M.abscessus_ATCC_199 SVEDAPMA------ASAGTALAPSPPASAAAPAAP-ASAPAPTASGTAPA TH_3113|M.thermoresistible__bu DGGASAAPVPAGGPSLPSGSSAPPAPTGSAAPTTGTAPGGAGSPPPAGHS . .. . :. . Mflv_0325|M.gilvum_PYR-GCK APGAP--AAAAATFVPYVVAGRDPYEGFSPTVRDS--TGAKAPAGTIPAA Mvan_0415|M.vanbaalenii_PYR-1 APGAP--AAATASFVPYAVAGRDPGTGFSPTVRDS--TSAKAPASGIPAA MSMEG_0619|M.smegmatis_MC2_155 TVAAP--APAAATFVPYAVANRDPGEGFTPTLGNK--SQVAAPASGVPAA Mb0288|M.bovis_AF2122/97 TPAPP-PAPGAAGFGYPYAIAP-PGIGFGSGMSAS--ASAQRKAPQPDSA Rv0280|M.tuberculosis_H37Rv TPAPP-PAPGAAGFGYPYAIAP-PGIGFGSGMSAS--ASAQRKAPQPDSA MUL_1202|M.ulcerans_Agy99 APPPP-PAPAAAGFGFPFVVGGGPGIGYGEGMSASAAASARRKAPEPD-S MMAR_1418|M.marinum_M PPPVP-PAAGGAGFSYPYLIGGGPSIGFGSGMSTSASASAKKKTPEPD-- MAV_4879|M.avium_104 PPAAPAPVAPAAGFFPPYVIGP-PGMGTGSGMSASASSSAKRKAPEPD-S MLBr_00539|M.leprae_Br4923 APAPP--GTGFGGFSPYLVDGRGPGVGFGSGRQSAYANKVSESVSDSA-V MAB_0809c|M.abscessus_ATCC_199 PPSPP--PVGDPGFSFPYAVGGGPRLGTGLALAAQVRRGTSAAARSSARE TH_3113|M.thermoresistible__bu VPPAPHSAPPVGTSGPPYLIAAQPAPGVARR-----SAGARRAASIVEPA * * * . . Mflv_0325|M.gilvum_PYR-GCK ASGIAASAAERRKRRRRQKEEIKGRGYADAYADYEELPDDGPPEQPAPRV Mvan_0415|M.vanbaalenii_PYR-1 ASGVAASAAERRKRRRRQKDEIAGRAYADAYADYEPEPDDEPPVRQEPRI MSMEG_0619|M.smegmatis_MC2_155 ASGVAASLASRRKRRRKKGAQIEERGYADAYMDYEE-PDEDPAPQPEPRV Mb0288|M.bovis_AF2122/97 AAAAAAAAVRDQARARRRR-RVTRRGYGDEFMDMNIDVDPDWGPPPGEDP Rv0280|M.tuberculosis_H37Rv AAAAAAAAVRDQARARRRR-RVTRRGYGDEFMDMNIDVDPDWGPPPGEDP MUL_1202|M.ulcerans_Agy99 AALAAAAAVREEARRRRRK-RKTERGYGEEFMDV--EVDPDWGGPLDDEP MMAR_1418|M.marinum_M --TAAAAAARERARARRRR-RATLRGYGDEFMDI--EVDPDWGAPPGEGP MAV_4879|M.avium_104 AAAAAAAAARAAARSRRRR-RATRHGHGEEFMDMNVDVDPDWGGPAGPES MLBr_00539|M.leprae_Br4923 AEAAAQASAREQARAWRRRSAAKERGYREEVITMNTGFDAAIPSPVDQTG MAB_0809c|M.abscessus_ATCC_199 QAAAAETAAARQARRRRDK--GKQQGRGIEYMDMN--ATARCEEPAPDTT TH_3113|M.thermoresistible__bu GSAAAAAAARESAPIRRRR------GQKDGLHGHRHEHQQPASMSAATAP * : . : . Mflv_0325|M.gilvum_PYR-GCK T----ASTRGAGPMGFAGTVSRGD-EQAGGLTTLA-GDSFGGGPREPMLP Mvan_0415|M.vanbaalenii_PYR-1 A----ATERGAGPMGFAGTVSRDA-AQAGGLTTLP-GDPFGGGPKAPMLP MSMEG_0619|M.smegmatis_MC2_155 R----ASERGSDAMGFTGTVTRHD-VTAAGLTTLT-GDTFDDRPVTPMLP Mb0288|M.bovis_AF2122/97 VTSTVASDRGAGHLGFAGTARREAVADAAGMTTLA-GDDFGDGPTTPMVP Rv0280|M.tuberculosis_H37Rv VTSTVASDRGAGHLGFAGTARREAVADAAGMTTLA-GDDFGDGPTTPMVP MUL_1202|M.ulcerans_Agy99 ----VASTQGAGRLGFAGTVHSESAATAAGLTTLV-ADEFGGGPKMPMLP MMAR_1418|M.marinum_M GASTVASDHGAGPVGIAGTVHTGSVTPAAGLTTLG-GDDFDGEPRMPMLP MAV_4879|M.avium_104 ----SASDRGAGALGFAGTARKDAAGAAAGLTTLP-GAELGG-PTMPMMP MLBr_00539|M.leprae_Br4923 ---SRVSDCGAGSFGFAGTVSKEAVVEVAGLTTLA-GDDFGGGPTMPMVP MAB_0809c|M.abscessus_ATCC_199 -----ASHRGAGTMGFAGTVIKTG-ATASGLAMLSRDDDLFEGVRAPMVP TH_3113|M.thermoresistible__bu ------SAAGIRVLGGAGRISRTRGSVPHAEITPG-------DPTEPSSP : * .* :* . * * Mflv_0325|M.gilvum_PYR-GCK GTWDPDATDDRHTDGRDGHDGHDGKEKP Mvan_0415|M.vanbaalenii_PYR-1 GTWDPDTEPD------ERHNHHDGKDSQ MSMEG_0619|M.smegmatis_MC2_155 GTWDGDENPAP------SPDDPEGGPRR Mb0288|M.bovis_AF2122/97 GSWDPD--RDAPGSAEPGDRG------- Rv0280|M.tuberculosis_H37Rv GSWDPD--RDAPGSAEPGDRG------- MUL_1202|M.ulcerans_Agy99 GTWDTD--SDAPSD-------------- MMAR_1418|M.marinum_M GTWDPDGARDAGKGS------------- MAV_4879|M.avium_104 GSWEPG--DDAGAEHDS----------- MLBr_00539|M.leprae_Br4923 GTWAPA--RESSDEGR------------ MAB_0809c|M.abscessus_ATCC_199 NTWDPEHGRQD----------------- TH_3113|M.thermoresistible__bu TDRAHRPAEPN-----------------