For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTDYDAIVVGAGHNGLTAAAVLQRAGLRTLCMEANTYTGGMAATVELIDGFHFEIAGSVQFPTASQISKE LGLDTLPTVAPEVMSTNIGESSEEAMIFYRDPLQLISHLGEKHGSAAVTGMAELIGWSQGPARALGRFEV RTPPRTLDEMYACATNQAERRAIHEMLFGSAMDVIDRFLPDKEKHAVMRGMLAFLAVNSTYRGPFTPGSA ACLAFALAVPDDSTAMMTKLRGGIGALTDHLRELFASAGGEIRFRSKVVEIVVDRGAVSGVRLPDGSVIS TPVVVSNLAPDVTLAKLVGPEHVGADLLARLAGRDHRASFVQIHFALDALPEFAPPYELLNEPGMQQSVG IFGTPEEQQQQWETCRRGIVPENPSMGMQIPSVHDSGLAPPGKHAASAYAYAFPVEVGRDQHGHLKRLMA QRVIDKITRFAPNFKDIVIRYITFAPYHMQTMFGAPSGDFCHGLLHPDLMGPNRPGPKGFLDFPIPIDGL YLGGAGCHGGPGITFIPGYNAAYQVLEDVATRQTSG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2813 | - | - | 100% (526) | dehydrogenase |
M. marinum M | MMAR_5383 | - | 0.0 | 61.26% (524) | dehydrogenase |
M. marinum M | MMAR_4639 | - | 7e-12 | 25.88% (313) | oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3859c | - | 0.0 | 60.11% (524) | putative dehydrogenase |
M. gilvum PYR-GCK | Mflv_1677 | - | 0.0 | 61.58% (518) | FAD dependent oxidoreductase |
M. tuberculosis H37Rv | Rv3829c | - | 0.0 | 60.31% (524) | dehydrogenase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0948c | - | 5e-08 | 21.23% (537) | hypothetical protein MAB_0948c |
M. avium 104 | MAV_2787 | - | 0.0 | 80.92% (519) | FAD dependent oxidoreductase, putative |
M. smegmatis MC2 155 | MSMEG_0664 | - | 6e-44 | 29.18% (538) | FAD dependent oxidoreductase |
M. thermoresistible (build 8) | TH_4571 | - | 2e-06 | 24.75% (299) | PUTATIVE dehydrogenase |
M. ulcerans Agy99 | MUL_2934 | - | 0.0 | 98.10% (526) | dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_0988 | - | 0.0 | 74.71% (518) | FAD dependent oxidoreductase |
CLUSTAL 2.0.9 multiple sequence alignment Mb3859c|M.bovis_AF2122/97 ----------------------MTGYDAIVIGAGHNGLTAAVLLQRAGLR Rv3829c|M.tuberculosis_H37Rv ----------------------MTGYDAIVIGAGHNGLTAAVLLQRAGLR Mflv_1677|M.gilvum_PYR-GCK ----------------------MTDFDAIVVGAGHNGLTAAALLQQAGLR MMAR_2813|M.marinum_M ----------------------MTDYDAIVVGAGHNGLTAAAVLQRAGLR MUL_2934|M.ulcerans_Agy99 ----------------------MTDYDAIVVGAGHNGLTAAAVLQRAGLR MAV_2787|M.avium_104 --------------------MSDTNYDAIVVGAGHNGLTAAAILQRAGLR Mvan_0988|M.vanbaalenii_PYR-1 ----------------------MSDYDAIIIGAGHNGLTAATVLQRAGLR MSMEG_0664|M.smegmatis_MC2_155 ---------------------MSNNYDALVIGGGHNGLVSAAYLARAGAR MAB_0948c|M.abscessus_ATCC_199 -----------------MGLSESDRYDTVIVGGGHNALTAAAYLARAGQR TH_4571|M.thermoresistible__bu VAAERSGADHGHLVPVPRRAGGGGVTTATVVGSGPNGLAAAVTLAKAGVA : ::*.* *.*.:*. * :** Mb3859c|M.bovis_AF2122/97 TACLDAKRYAGGMASTVELFDG---YRFDIAGSVQFPTSSAVSSELGLDS Rv3829c|M.tuberculosis_H37Rv TACLDAKRYAGGMASTVELFDG---YRFEIAGSVQFPTSSAVSSELGLDS Mflv_1677|M.gilvum_PYR-GCK TVCLDFKLYAGGMASTVELFDG---FRFEIAGSVQVPTSAVVSDALELGD MMAR_2813|M.marinum_M TLCMEANTYTGGMAATVELIDG---FHFEIAGSVQFPTASQISKELGLDT MUL_2934|M.ulcerans_Agy99 TLCMEANTYAGGMAATVELIDG---FHFEIAGSVQFPTASQISKELGLDT MAV_2787|M.avium_104 TVCLEANTYAGGMAATVELIDG---FRYEIAGSVQFPMAAQLAKDLGLDT Mvan_0988|M.vanbaalenii_PYR-1 TVLLEANTYAGGMAATVELIDG---FRYEIAGSVQFPTPAVVAKELGLDQ MSMEG_0664|M.smegmatis_MC2_155 TLVLESRSSLGGAATTEAPWDDAPHLRVTRLSYVMSLMPPTIVRDLALER MAB_0948c|M.abscessus_ATCC_199 VMLLERLDVFGGAAISAPAFEG-VEARLSRYSYLVSLMPRQIIDDLGLDV TH_4571|M.thermoresistible__bu VTVLEAADEIGGGTRSFEAIVPG-LLHDHCSAIHPMAVGSPFINEFGLDR . :: ** : : : . . : * Mb3859c|M.bovis_AF2122/97 LPTVDLEVMSVALRGVGDDPVVQFTDPTKMLTHLHRVHGADAVTGMAGLL Rv3829c|M.tuberculosis_H37Rv LPTVDLEVMSVALRGVGDDPVVQFTDPTKMLTHLHRVHGADAVTGMAGLL Mflv_1677|M.gilvum_PYR-GCK LPTVDLDVMSVQLRGVGDDPLVYYTDPMKLLTHLNDVHGAEAVNGMAGLM MMAR_2813|M.marinum_M LPTVAPEVMSTNIGESSEEAMIFYRDPLQLISHLGEKHGSAAVTGMAELI MUL_2934|M.ulcerans_Agy99 LPTVAPEVMSTNIGESDEEAMIFYRDPLQLISHLGEKHGSAAVTGMAELI MAV_2787|M.avium_104 LPAVEPDVMSTNIGEHGEEPMIFYRDLVRLMTHLSDKHGLNAVTGMADLI Mvan_0988|M.vanbaalenii_PYR-1 LPTVDTEVMSVNLGDDGDEPMIFYRDPMQFMTHLAEKHGADAVAGMAGLL MSMEG_0664|M.smegmatis_MC2_155 HGYKVHPMGPYYQAFPEGGSLTIYEDDPARTYEQLSRFSKKDADAWPKWN MAB_0948c|M.abscessus_ATCC_199 R-LARRKYASYTPDPMNGGQRGFLAGP----------------NDFAEFG TH_4571|M.thermoresistible__bu HGLRWRWPDIDCVHPLDDGTAGVLRRSVDHTAAGLGPDGRVWRALFGRPV Mb3859c|M.bovis_AF2122/97 AWSQAPTRALGRFEAGTLP----KSFDEMYACATNEFERSAIDDMLFGSV Rv3829c|M.tuberculosis_H37Rv AWSQAPTRALGRFEAGTLP----KSFDEMYACATNEFERSAIDDMLFGSV Mflv_1677|M.gilvum_PYR-GCK AWCQAPTRALGRFEAAQPP----KTLDEMFACATNEFERQAISDILFGSV MMAR_2813|M.marinum_M GWSQGPARALGRFEVRTPP----RTLDEMYACATNQAERRAIHEMLFGSA MUL_2934|M.ulcerans_Agy99 GWSQGPARALGRFEVRTPP----RTLDEMYACATNQAERRAIHEMLFGSA MAV_2787|M.avium_104 GWSRGPAKALGRFDVRQPP----KTLDEMYACAVDDNERRAIHEMLFGSA Mvan_0988|M.vanbaalenii_PYR-1 GWSHGPAQALGRFDVCTPP----KTIDEMYACAADEDQRRAIHDVLFGTA MSMEG_0664|M.smegmatis_MC2_155 AWLEGIADVMGPLLTQVPPNIGSHRPADLLDLAKLAWGQRGITSRAVADI MAB_0948c|M.abscessus_ATCC_199 ALCDSVTRPMWDSMLQPLR----------RRGAVRTGAWEQLIETPIGEV TH_4571|M.thermoresistible__bu DRFDAVNDAVMGPLLRVPK-------------HPLTLARFGAPTVLPASA . : . Mb3859c|M.bovis_AF2122/97 TDVLDR----HFPDREKHGALRGSMTVLAVNTLYRGPATPGSAAALAFGL Rv3829c|M.tuberculosis_H37Rv TDVLDR----HFPDREKHGALRGSMTVLAVNTLYRGPATPGSAAALAFGL Mflv_1677|M.gilvum_PYR-GCK TDVLDR----YLPDREKHGALRGMLAFLAVNTTYRGPATPGSAAALAFGL MMAR_2813|M.marinum_M MDVIDR----FLPDKEKHAVMRGMLAFLAVNSTYRGPFTPGSAACLAFAL MUL_2934|M.ulcerans_Agy99 MDVIDR----FLPDKEKHAVMRGILAFLAVNSTYRGPFTPGSAACLAFAL MAV_2787|M.avium_104 MDVIDR----YLPDRDKHAVMRGMLAFLAVNSTYRGPYTPGSAACLAFAL Mvan_0988|M.vanbaalenii_PYR-1 MDAIDR----YLPDRHRHAVLRSMLAFLAVNSTYRGPYTPGSATCLAFAL MSMEG_0664|M.smegmatis_MC2_155 TRLLTMSIADLLDDWFESPQIKGALAVNGVIGTWAGPYEPGTAYVMAHHS MAB_0948c|M.abscessus_ATCC_199 IRAATP-----------DDVRRGVLLTDALIGTFASADDLSLQQNICFLY TH_4571|M.thermoresistible__bu LARVFR-----------TPAARALWGGVAAHAFRPLHLPMTSAIGVGIIT :. . : Mb3859c|M.bovis_AF2122/97 G--VPEGDFVRWKKLRGGIGALTTHLSQLLERTGGEVRLRSKVTEIVVDN Rv3829c|M.tuberculosis_H37Rv G--VPEGDFVRWKKLRGGIGALTTHLSQLLERTGGEVRLRSKVTEIVVDN Mflv_1677|M.gilvum_PYR-GCK A--VPDENATLIKKFRGGMGAVTEHLLQMFTAAGGELRLRTKVDEILVD- MMAR_2813|M.marinum_M A--VPDDSTAMMTKLRGGIGALTDHLRELFASAGGEIRFRSKVVEIVVD- MUL_2934|M.ulcerans_Agy99 A--VPDDSTAMMTKLRGGIGALTDHLRERFASAGGEIRFRSKVVEIVVD- MAV_2787|M.avium_104 A--VPDDSTAMMTKLRGGIGALTEHLRELFVSQGGEIRFRTKVEEILVT- Mvan_0988|M.vanbaalenii_PYR-1 A--VPDDSTAMMTKLQGGIGALCDHLLDQYLRCGGAIRYRAKVDGITVD- MSMEG_0664|M.smegmatis_MC2_155 IGDVGDGQLGSWGFPEGGMGAVSAAIACSARSFGAEIRTNARVSRLLVR- MAB_0948c|M.abscessus_ATCC_199 H------QMNPWDVPIGGMGAVTGSLEASARRHGAELLSGAEVLSISPD- TH_4571|M.thermoresistible__bu AG-----HRHGWAVAEGGSRAITDAMAARLRELGGTIETGVRVRDIADLP ** *: : *. : .* : Mb3859c|M.bovis_AF2122/97 SRSSARVRGVRTAAGDTLTSPIVVSAIAPDVTINELIDPAVLPSEIRDRY Rv3829c|M.tuberculosis_H37Rv SRSSARVRGVRTAAGDTLTSPIVVSAIAPDVTINELIDPAVLPSEIRDRY Mflv_1677|M.gilvum_PYR-GCK ---GGRVTGVRLEDGATLSAPVVVSNLAPDLTVNQLVDGSAIPADIRERF MMAR_2813|M.marinum_M ---RGAVSGVRLPDGSVISTPVVVSNLAPDVTLAKLVGPEHVGADLLARL MUL_2934|M.ulcerans_Agy99 ---RGAVSGVRLPDGSVIGTPVVVSNLAPDVTLAKLVGPEHVPADLLARL MAV_2787|M.avium_104 ---GRQVTGVRLRDESTVSAPIVVSNLSPDITLTELIAPEHVPAQLVSRV Mvan_0988|M.vanbaalenii_PYR-1 ---GGRVTGVRLRDGSRIDAPAVISTLAPDLTLNTMVGAEHLPADLTARL MSMEG_0664|M.smegmatis_MC2_155 ---NGRVEGAVLDNGDEIHAPVVVTTLHPKTAFLDHIPRTELPQDFVGDI MAB_0948c|M.abscessus_ATCC_199 ----AEVRYRSDGGEHTVAGDRVLSGVSP-----------TVLAGLLGET TH_4571|M.thermoresistible__bu --------------------PTTITVFDLAPEAVAEILGDRLPPRVARAY .:: . : . Mb3859c|M.bovis_AF2122/97 LRIDHRGSYLQMHFALAQPPAFAAPYQALNDPSMQASMGIFCTPEQVQQQ Rv3829c|M.tuberculosis_H37Rv LRIDHRGSYLQMHFALAQPPAFAAPYQALNDPSMQASMGIFCTPEQVQQQ Mflv_1677|M.gilvum_PYR-GCK ARIDHRGSYVQMHFALDGPPTFAEPYEVLNDPEYQSAIGIFTTPEELQQQ MMAR_2813|M.marinum_M AGRDHRASFVQIHFALDALPEFAPPYELLNEPGMQQSVGIFGTPEEQQQQ MUL_2934|M.ulcerans_Agy99 AGRDHRASFVQIHFALDALPEFAPPYELLNEPGMQQSVGIFGTPEEQQQQ MAV_2787|M.avium_104 SGRDHRASFVQIHFALDGLPEFAPPHEFLNEEGMQQSVGIFGSPEEQQLH Mvan_0988|M.vanbaalenii_PYR-1 TGRDHRASFVQIHFALDGLPEFAPPYDFLNEPGMQGSIGMFNSPEEQQRQ MSMEG_0664|M.smegmatis_MC2_155 EHWKSRSGVVKINLALAELPNFTADPSSGIAEHHTGSVEMAPTMEFIEAA MAB_0948c|M.abscessus_ATCC_199 PPAGQPGAQVKVNLLLRRLPRLRDE-NVTPEQAFGGTFHVNETYTQLEYA TH_4571|M.thermoresistible__bu RAFRRGPGAFKVDFAVEGGVPWCNP-----DAHRAGTVHVGGTFEEIAAT . .::.: : :. : : Mb3859c|M.bovis_AF2122/97 WEDCRRGIVPADP-----TVVLQIPSLHDPSLAPAGKQAASAFAMWFPIE Rv3829c|M.tuberculosis_H37Rv WEDCRRGIVPADP-----TVVLQIPSLHDPSLAPAGKQAASAFAMWFPIE Mflv_1677|M.gilvum_PYR-GCK WEDSRRGVVPADP-----AIALQIPSANDPTLAPPGKHAVSAFSLWFPLS MMAR_2813|M.marinum_M WETCRRGIVPENP-----SMGMQIPSVHDSGLAPPGKHAASAYAYAFPVE MUL_2934|M.ulcerans_Agy99 WETCRRGIVPENP-----SMGMQIPSVHDSGLAPPGKHAASAYAYAFPVE MAV_2787|M.avium_104 WENCRRGVVPDNP-----SMGMQIPSVHDPSMAPPGKHAASAFAYAFPVE Mvan_0988|M.vanbaalenii_PYR-1 WEECRRGVIPDNP-----SMGMQIPSVHDPAMAPPGMHAASAFAYAFPVE MSMEG_0664|M.smegmatis_MC2_155 FQDARNGKPALLP-----FSDGVIPTTLDTTLNPDGTHIMSLFTQWVPAE MAB_0948c|M.abscessus_ATCC_199 YQQASHGRIPDPLPCEIYCHSLADPSILSPELRASGAHTLTVFGLHTPHG TH_4571|M.thermoresistible__bu ERDVNAGRMPERP----------FVLVAQQYVADPGRSVGDIHPVWSYAH . * . . : * . Mb3859c|M.bovis_AF2122/97 GGSKYG-GYGRAKVEMGQNVIDKITRLAPNFKGSILRYTTFTPKHMGVMF Rv3829c|M.tuberculosis_H37Rv GGSKYG-GYGRAKVEMGQNVIDKITRLAPNFKGSILRYTTFTPKHMGVMF Mflv_1677|M.gilvum_PYR-GCK --EEIS-GYGALKTEMGRRVIDKITRLATDFEKLILRHTTFTPKHMGTMF MMAR_2813|M.marinum_M VGRDQ---HGHLKRLMAQRVIDKITRFAPNFKDIVIRYITFAPYHMQTMF MUL_2934|M.ulcerans_Agy99 VDRDQ---HGHLKRIMARRVIDKITRFAPNFKDIVIRYITFAPYHMQTMF MAV_2787|M.avium_104 VARDQ---HGRLKNAMAQRVIDKITRLAPNFKDIVIRHITFAPYHMNTMF Mvan_0988|M.vanbaalenii_PYR-1 TPRDQ---HGRLKNVMAEKVIDKICRYAPNFRDVQIRHITFAPYHMDTMF MSMEG_0664|M.smegmatis_MC2_155 WAAEP---HTEELDAYADRLIELYDQVAPGFKASITHRDIVGPYDMEHEY MAB_0948c|M.abscessus_ATCC_199 LGASAEQLQQAVLASLSSVLAEPITDVVATDTHGRPCIETKTTIDLESAL TH_4571|M.thermoresistible__bu VPHGYP-------GDATEAVVAQIERFAPGFRDRIVGYRTESAEGMARFN : .. . : Mb3859c|M.bovis_AF2122/97 G-APGGDYCHALLHSDQIGPNRPGPKGFIGQPIPIAG--LYLGSAGCHGG Rv3829c|M.tuberculosis_H37Rv G-APGGDYCHALLHSDQIGPNRPGPKGFIGQPIPIAG--LYLGSAGCHGG Mflv_1677|M.gilvum_PYR-GCK N-APGGDYCHGLIHPEQMGPNRPGPKGYVDQPIPIAG--LYLAGAGCHGG MMAR_2813|M.marinum_M G-APSGDFCHGLLHPDLMGPNRPGPKGFLDFPIPIDG--LYLGGAGCHGG MUL_2934|M.ulcerans_Agy99 G-APSGDFCHGLLHPDLMGPNRPGPGGFLDFPIPIDG--LYLGGAGCHGG MAV_2787|M.avium_104 G-APSGDFCHGLLHPDLMGPNRPGPKGFVDMPIEIDG--LYLAGAGCHGG Mvan_0988|M.vanbaalenii_PYR-1 A-APAGDFCHGLLHPDLMGPNRPGPKGFLDMPVPIDG--LYLGGAGCHGG MSMEG_0664|M.smegmatis_MC2_155 G-LIGGNIFHGELSLEQLFHMRPAP-GYADYRTPIAG--LYNGSSATHAG MAB_0948c|M.abscessus_ATCC_199 G-MTAGNIFHGGLQWPFAEDDDPLETAAQRWGVATNHDRILLCGSGSRRG TH_4571|M.thermoresistible__bu ANFTGGDILTGAKDIRQLTFG--PRITLSPYATGAPG--YYICSAATPPG .*: . .:. * Mb3859c|M.bovis_AF2122/97 PGITFIPGYNAARQALADRRAANCCVLSGR---------- Rv3829c|M.tuberculosis_H37Rv PGITFIPGYNAARQALADRRAANCCVLSGR---------- Mflv_1677|M.gilvum_PYR-GCK PGITFIPGYNAAQQVLAEH--------------------- MMAR_2813|M.marinum_M PGITFIPGYNAAYQVLEDVATRQTSG-------------- MUL_2934|M.ulcerans_Agy99 PGITFIPGYNAAYQVLEDVATRQTSG-------------- MAV_2787|M.avium_104 PGITFTPGYNAAYQVLDDAS-------------------- Mvan_0988|M.vanbaalenii_PYR-1 PGITFIPGYNAAHQVLADRVSAASARTR------------ MSMEG_0664|M.smegmatis_MC2_155 GGVCGIPGWQAARAVLADKKRARRSEALRKRLPAALGGRS MAB_0948c|M.abscessus_ATCC_199 GGVSGLGGYHAARAVLETH--------------------- TH_4571|M.thermoresistible__bu PGAHGMCGYHAAQTALRELAR------------------- * *::** .*