For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSNQAAPAIVVGIDGSRASTHAAVWAVDEAVSRDIPVRLVYIIDPAQAPASDRDGRQSAARAALFDVQRA VEATGQPVKIETEILWGRPLTKLLEESRTAVMVCVGSIGLNHARRGEGSVAGTLAGSALCPVAVIQSPAG AAGAPKVGEVVAEVDNGSVLRHAFEEARLRNVPLRAISSRVATGHGSEDGNRLATAQLTRRLTRWTRLYP DVRVESAIIAGHACRYMAANAKPDELYVTDSHAAQVCSVYGAGCSVLTVRSGNL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1515 | - | - | 100% (264) | hypothetical protein MMAR_1515 |
M. marinum M | MMAR_3478 | - | 5e-33 | 37.04% (270) | hypothetical protein MMAR_3478 |
M. marinum M | MMAR_2076 | - | 5e-32 | 35.58% (267) | hypothetical protein MMAR_2076 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3158c | - | 8e-94 | 67.56% (262) | hypothetical protein Mb3158c |
M. gilvum PYR-GCK | Mflv_3846 | - | 7e-39 | 42.02% (238) | UspA domain-containing protein |
M. tuberculosis H37Rv | Rv3134c | - | 8e-94 | 67.56% (262) | hypothetical protein Rv3134c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3904 | - | 5e-33 | 37.69% (268) | hypothetical protein MAB_3904 |
M. avium 104 | MAV_4010 | - | 3e-73 | 57.31% (260) | hypothetical protein MAV_4010 |
M. smegmatis MC2 155 | MSMEG_5245 | - | 3e-37 | 35.14% (276) | universal stress protein family protein |
M. thermoresistible (build 8) | TH_4471 | - | 2e-17 | 30.95% (252) | PUTATIVE putative universal stress protein family protein |
M. ulcerans Agy99 | MUL_2424 | - | 1e-146 | 98.86% (264) | hypothetical protein MUL_2424 |
M. vanbaalenii PYR-1 | Mvan_1382 | - | 1e-38 | 42.58% (256) | UspA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1515|M.marinum_M -MSN-QAAPAIVVGIDGSRASTHAAVWAVDEAVSRDIPVRLVYIIDPA-- MUL_2424|M.ulcerans_Agy99 -MSN-QAAPAIVVGIDGSRASTHAAVWAVDEAVSRDIPVRLVYIIDPA-- Mb3158c|M.bovis_AF2122/97 -MSDPRPARAVVVGIDGSRAATHAALWAVDEAVNRDIPLRLVYVIDPS-- Rv3134c|M.tuberculosis_H37Rv -MSDPRPARAVVVGIDGSRAATHAALWAVDEAVNRDIPLRLVYVIDPS-- MAV_4010|M.avium_104 -MSTAYPAPAIVVGVDGSRAAMHAAVWAIDEAVGRDIPLRLVYVIDPH-- Mflv_3846|M.gilvum_PYR-GCK -MLDATFVPCIVVGIDGSPAAVDAALWAVDQAVDLDIPLRLVYVIDADNE MSMEG_5245|M.smegmatis_MC2_155 ----MSIARPVIVGIDGSQPAVDAAIWAVKEALSRGVPLRLIYAVHPD-D MAB_3904|M.abscessus_ATCC_1997 MNEIRTPGPAVLVGIDGSRSAVRAALWAVDEALHRELPLRLVHVTPQT-- Mvan_1382|M.vanbaalenii_PYR-1 ----MQTSPAVVVGIDGSRFATAAAIWAIDEAASRDIPLRLVHAVTPT-- TH_4471|M.thermoresistible__bu -MAIPAIQDSIVAGVDGSPSSAAAVEWAARNAALRDRPLVLVHVVPSPMV ::.*:*** : *. ** :* *: *:: MMAR_1515|M.marinum_M ------QAPAS-DRDGRQSAARAALFDVQRAVEATGQPVKIETEILWGRP MUL_2424|M.ulcerans_Agy99 ------QAPAG-DRDGRQSSARAALFDVQRAVEATGQPVKIETEILWGRP Mb3158c|M.bovis_AF2122/97 ------QLSAA-GEGGGQSAARAALHDASRKVEATGQPVKIETEVLCGRP Rv3134c|M.tuberculosis_H37Rv ------QLSAA-GEGGGQSAARAALHDASRKVEATGQPVKIETEVLCGRP MAV_4010|M.avium_104 ------GAPGGHGPDTRLAAARAALADAHRAVDAFAQPVKVETEILWGNT Mflv_3846|M.gilvum_PYR-GCK ------DAVDPHDQARQLATAEMAVRYALTALESTDQPVKIEVEILRGRP MSMEG_5245|M.smegmatis_MC2_155 ------NGADHENSARALATAEVAIRQACVAVESTEQPVQIELEVVQDKP MAB_3904|M.abscessus_ATCC_1997 ---------EFPEFSDERSPAGTAVRHAFRQIGATHKPVKVEAEIRHGRV Mvan_1382|M.vanbaalenii_PYR-1 --------DGAHLDADDLARAGRVVQSAVAAVEANGKPVKVETQITPGRA TH_4471|M.thermoresistible__bu TTAPWPQLPLPDDAFRVMQEEGERLLAQARAAAEQAGAGEVRTAVLQAGI : . ::. : MMAR_1515|M.marinum_M LTKLLEESRTAVMVCVGSIGLNHARRG-EGSVAGTLAGSALCPVAVIQ-- MUL_2424|M.ulcerans_Agy99 LTKLLEESRTAVMVCVGSIGLNHARRG-EGSVAGTLAGSALCPVAVIQ-- Mb3158c|M.bovis_AF2122/97 LTKLMQESRSAAMLCVGSVGLDHVRGR-RGSVAATLAGSALCPVAVIHP- Rv3134c|M.tuberculosis_H37Rv LTKLMQESRSAAMLCVGSVGLDHVRGR-RGSVAATLAGSALCPVAVIHP- MAV_4010|M.avium_104 AFKLLEQSRSAVMLCVGQIGLNHACHG-GPAIATSLVRSALCPVAVVQQ- Mflv_3846|M.gilvum_PYR-GCK VQTLLEAARSAVLLCLGARGLKHSTQGRIGSTAGAVSTSAHCPVAVVRAH MSMEG_5245|M.smegmatis_MC2_155 IEALIAASQNTPLLCVGASGLTQAGRGGIGSVASAVLRSAQCPVAVVATP MAB_3904|M.abscessus_ATCC_1997 ADVLLDASRSAVMLCVGAIGISGADTRKVGSTAAEVLRSVRCPVAVIRDD Mvan_1382|M.vanbaalenii_PYR-1 AHVLRSQSRDAALLCVGSSGLTHGGSGPVDRTAAAVALTASCPVAIIHSA TH_4471|M.thermoresistible__bu VGTLTELSRDADRIVVGSRGQTALGRMLLGSVSTGLVHQAECPVVIVRD- * :: : : :* * : : . ***.:: MMAR_1515|M.marinum_M SPAGAAGAPKVGEVVAEVDNGSVLRHAFEEARLRNVPLRAISSRVATG-- MUL_2424|M.ulcerans_Agy99 SPAGAAGAPKVGEVVAEVDNGSVLRHAFEEARLRNVPLRAISSRVATD-- Mb3158c|M.bovis_AF2122/97 SPAEPATTSQVSAVVAEVDNGVVLRHAFEEARLRGVPLRAVAVHAAETP- Rv3134c|M.tuberculosis_H37Rv SPAEPATTSQVSAVVAEVDNGVVLRHAFEEARLRGVPLRAVAVHAAETP- MAV_4010|M.avium_104 APSLPA-AARVSGVVAEVDNGTVLRHAFEEARLRGVGLCAV--------- Mflv_3846|M.gilvum_PYR-GCK RPHRRPDRAVVIEITDNAGGGAVLERGLDEARRRGAPVRVLTS------- MSMEG_5245|M.smegmatis_MC2_155 GKGRR----ILVEFDGRPSASTALQTGVDEARLRDAPLSVMTTWQHRHRE MAB_3904|M.abscessus_ATCC_1997 PSSLRGTSAVVVEIDESHESVTPLELAAHEARLRAAPLRVLLRHRPISLS Mvan_1382|M.vanbaalenii_PYR-1 GTNSKP-GWVVVEVNDSPAGELVLRTGVEEALLRGAALRVVATWPSRYPD TH_4471|M.thermoresistible__bu GDQPPGDAPVLVGIDGSPASELATEVAFEEASVRQVELVALHGWRDTSLF : . . . .** * . : .: MMAR_1515|M.marinum_M -----HGSEDGNRLATAQLTRRLTRWTRLYPDVRVESAIIAGHACRYMAA MUL_2424|M.ulcerans_Agy99 -----HGSEDGNRLATAQLTRRLTRWTRLYPDVRVESAIIAGHACRYMAA Mb3158c|M.bovis_AF2122/97 -----DDVEQGSRLAHVHLSRRLAHWTRLYPEVRVDRAIAGGSACRHLAA Rv3134c|M.tuberculosis_H37Rv -----DDVEQGSRLAHVHLSRRLAHWTRLYPEVRVDRAIAGGSACRHLAA MAV_4010|M.avium_104 ----------GNPSARVELERRLARWMRLYPDVQAESAVLTGGVEQHLRA Mflv_3846|M.gilvum_PYR-GCK --------ARSQLDVTGRWERRLAEWRRRYPDLDISAVRARDGLFDYLAA MSMEG_5245|M.smegmatis_MC2_155 LYEEKVAEERNRLAQS-QLDRRMTRYRKRYPELDLELITDHGNTADYVAA MAB_3904|M.abscessus_ATCC_1997 GQRVATLTRVDRRVAAVHVERRLAPLRVRYPDLDIRALDPVGGTLDYLER Mvan_1382|M.vanbaalenii_PYR-1 IHDDGAVANKNRSVKA-QWERRLAPWRLRHPELEVHAVATPGSILNYLAR TH_4471|M.thermoresistible__bu HYPG-LDTESLQTQAEAVLAERLAGWQERYPDVTVRRVVVAEHPARALVQ .*:: :*:: : MMAR_1515|M.marinum_M NAKPDELYVTDSH-AAQVCSVY---------GAGCSVLTVRSGNL- MUL_2424|M.ulcerans_Agy99 NAKPDELYVTDSH-AAQVCSVY---------GAGCSVLTVRSGNL- Mb3158c|M.bovis_AF2122/97 NAKPGQLFVADSHSAHELCGAY---------QPGCAVLTVRSANL- Rv3134c|M.tuberculosis_H37Rv NAKPGQLFVADSHSAHELCGAY---------QPGCAVLTVRSANL- MAV_4010|M.avium_104 DHRAGRLLVTDAYRAEALC------------HAGHSVLAVRCGNL- Mflv_3846|M.gilvum_PYR-GCK HGDGLQLLVAGRNRPGGVAPLVGTPGNAALRDTDCSILVCEPPNAL MSMEG_5245|M.smegmatis_MC2_155 NPQTVQLIVVGAERFNRAGDVTDPAALGALVDAGCSLLTCDRQQRL MAB_3904|M.abscessus_ATCC_1997 HGHTVQLVVVGAGDAAHVQELVGPNGCGVLGRTHCSVLIAERQRLL Mvan_1382|M.vanbaalenii_PYR-1 HRDPIGLAIVPHERAAGVAELLAPRGRDPLRDGCFDVLICEPDNAP TH_4471|M.thermoresistible__bu RAEEAQLVVVGSRGRSGLTGKLLGSVSTGVVHSVRVPVMVARPR-- * :. : .