For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKPVIVGIDGSPAGITAVLWATAEAVSAGVPLRLISVLKTAHSSPEEYEHDLAHAETSLRAAQSAIEATA APVKVETDTPRGPAGAVLVEASRDAELVCVGSVGIGRYARAILGSTATELAEKAHCPVAVIRSNSDQPPP DINWIVVRVTDAPDNDAVIEYAAHEARLRQAPILALGGRPEELTDAADGEFERRVQQWGQHHTDVHVYPI TTQAGIARFLADHDERVQLAVIGADEADQVARLVGPSGHPIFRHAECSVLVVRG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_2076 | - | - | 100% (264) | hypothetical protein MMAR_2076 |
| M. marinum M | MMAR_3478 | - | 8e-61 | 47.51% (261) | hypothetical protein MMAR_3478 |
| M. marinum M | MMAR_3481 | - | 4e-42 | 36.12% (263) | hypothetical protein MMAR_3481 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2657c | - | 1e-115 | 76.81% (263) | hypothetical protein Mb2657c |
| M. gilvum PYR-GCK | Mflv_4991 | - | 3e-63 | 49.43% (261) | UspA domain-containing protein |
| M. tuberculosis H37Rv | Rv2624c | - | 1e-115 | 76.81% (263) | hypothetical protein Rv2624c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3904 | - | 2e-37 | 37.00% (273) | hypothetical protein MAB_3904 |
| M. avium 104 | MAV_4010 | - | 5e-27 | 33.46% (263) | hypothetical protein MAV_4010 |
| M. smegmatis MC2 155 | MSMEG_3939 | - | 1e-53 | 45.45% (264) | universal stress protein family protein |
| M. thermoresistible (build 8) | TH_4471 | - | 3e-23 | 28.01% (282) | PUTATIVE putative universal stress protein family protein |
| M. ulcerans Agy99 | MUL_2424 | - | 4e-32 | 35.58% (267) | hypothetical protein MUL_2424 |
| M. vanbaalenii PYR-1 | Mvan_1387 | - | 8e-66 | 49.24% (262) | UspA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2657c|M.bovis_AF2122/97 MSGRGEPTMKTIIVGIDGSHAAITAALWGVDEAISRAVPLRLVSVIKP--
Rv2624c|M.tuberculosis_H37Rv MSGRGEPTMKTIIVGIDGSHAAITAALWGVDEAISRAVPLRLVSVIKP--
MMAR_2076|M.marinum_M --------MKPVIVGIDGSPAGITAVLWATAEAVSAGVPLRLISVLKT--
Mflv_4991|M.gilvum_PYR-GCK --MATANSDMPVVAGIDGSAAALGAALWAVDEAAARGATLRLVYVTKP--
Mvan_1387|M.vanbaalenii_PYR-1 --MATAGTSSPVIAGIDGSATALAAALWAVDEAAGRGAPVHLVYTTKP--
MSMEG_3939|M.smegmatis_MC2_155 --MLEPENSAPIVVGIDGSEAGVRAARWAAAEAESRNVPLRLVYATKA--
MAB_3904|M.abscessus_ATCC_1997 -MNEIRTPGPAVLVGIDGSRSAVRAALWAVDEALHRELPLRLVHVTPQ--
MAV_4010|M.avium_104 --MSTAYPAPAIVVGVDGSRAAMHAAVWAIDEAVGRDIPLRLVYVIDP--
MUL_2424|M.ulcerans_Agy99 --MSN-QAAPAIVVGIDGSRASTHAAVWAVDEAVSRDIPVRLVYIIDP--
TH_4471|M.thermoresistible__bu --MAIPAIQDSIVAGVDGSPSSAAAVEWAARNAALRDRPLVLVHVVPSPM
.::.*:*** :. *. *. :* .: *:
Mb2657c|M.bovis_AF2122/97 ------THPSPDDYDRDL-AHAERSLREAQSAVEAAGKLVKIETDIPRGP
Rv2624c|M.tuberculosis_H37Rv ------THPSPDDYDRDL-AHAERSLREAQSAVEAAGKLVKIETDIPRGP
MMAR_2076|M.marinum_M ------AHSSPEEYEHDL-AHAETSLRAAQSAIEATAAPVKVETDTPRGP
Mflv_4991|M.gilvum_PYR-GCK ------SDRSAAEYAGDV-RHGRQSLREAQVLVQSTGESVNVETEIVDGP
Mvan_1387|M.vanbaalenii_PYR-1 ------TDRHAAEYAEDV-RRGHECLHEARSAVEATGKPVTVETTVVDGP
MSMEG_3939|M.smegmatis_MC2_155 ------SHPSADDYYDDV-RRGQDALSAAQIDVNRRYSEVKVETALVDGP
MAB_3904|M.abscessus_ATCC_1997 ------TEFP--EFSDER-SPAGTAVRHAFRQIGATHKPVKVEAEIRHGR
MAV_4010|M.avium_104 ------HGAPGGHGPDTRLAAARAALADAHRAVDAFAQPVKVETEILWGN
MUL_2424|M.ulcerans_Agy99 ------AQAPAGD-RDGRQSSARAALFDVQRAVEATGQPVKIETEILWGR
TH_4471|M.thermoresistible__bu VTTAPWPQLPLPDDAFRVMQEEGERLLAQARAAAEQAGAGEVRTAVLQAG
. : :.: .
Mb2657c|M.bovis_AF2122/97 AGPVLVEASRDAEMICVGSVGIGRYASSILGSTATELAEKAHCPVAVMRS
Rv2624c|M.tuberculosis_H37Rv AGPVLVEASRDAEMICVGSVGIGRYASSILGSTATELAEKAHCPVAVMRS
MMAR_2076|M.marinum_M AGAVLVEASRDAELVCVGSVGIGRYARAILGSTATELAEKAHCPVAVIRS
Mflv_4991|M.gilvum_PYR-GCK PAQALVALSEHAQMVCVGSVGIGRYARSILGSTAADVAAAARCPVAVIRP
Mvan_1387|M.vanbaalenii_PYR-1 AAQALISLSEQAQMVCVGSVGIGRYARSILGSTAAEVAERAHCPVAVIRP
MSMEG_3939|M.smegmatis_MC2_155 PGRALIDESDRAAMLCVGSVGIGRYAESILGSIALAVAEGAACPVAVIRA
MAB_3904|M.abscessus_ATCC_1997 VADVLLDASRSAVMLCVGAIGISGADTRKVGSTAAEVLRSVRCPVAVIRD
MAV_4010|M.avium_104 TAFKLLEQSRSAVMLCVGQIGLN-HACHGGPAIATSLVRSALCPVAVVQQ
MUL_2424|M.ulcerans_Agy99 PLTKLLEESRTAVMVCVGSIGLN-HARRGEGSVAGTLAGSALCPVAVIQS
TH_4471|M.thermoresistible__bu IVGTLTELSRDADRIVVGSRGQTALGRMLLGSVSTGLVHQAECPVVIVRD
* * * : ** * : : : . ***.:::
Mb2657c|M.bovis_AF2122/97 KVDQPASDINWIVVRMTDAPDNEAVLEYAAREAKLRQAPILALGGR----
Rv2624c|M.tuberculosis_H37Rv KVDQPASDINWIVVRMTDAPDNEAVLEYAAREAKLRQAPILALGGR----
MMAR_2076|M.marinum_M NSDQPPPDINWIVVRVTDAPDNDAVIEYAAHEARLRQAPILALGGR----
Mflv_4991|M.gilvum_PYR-GCK ESRVGVDTPNWIIVAVNDRPHNGAVVEHALQEAALRHAAVLVLG------
Mvan_1387|M.vanbaalenii_PYR-1 HPHAGEHGFHWIVVAVTEQPQNAEVVEHALREAALRHVPVLALG------
MSMEG_3939|M.smegmatis_MC2_155 QE--DDSAVHWIAAGN---PADEHVVESAMAEARLRQAPVLVLG------
MAB_3904|M.abscessus_ATCC_1997 DP-SSLRGTSAVVVEIDESHESVTPLELAAHEARLRAAPLRVLLRHRPIS
MAV_4010|M.avium_104 APSLPAAAR---VSGVVAEVDNGTVLRHAFEEARLRGVGLCAV-------
MUL_2424|M.ulcerans_Agy99 PAGAAGAPK---VGEVVAEVDNGSVLRHAFEEARLRNVPLRAISSRVATD
TH_4471|M.thermoresistible__bu GDQPPGDAP--VLVGIDGSPASELATEVAFEEASVRQVELVALHGWRDTS
. . * ** :* . : .:
Mb2657c|M.bovis_AF2122/97 ---------PEELREIPDGEFERRVQDWHHRHPDVRVYPITTHTGIARFL
Rv2624c|M.tuberculosis_H37Rv ---------PEELREIPDGEFERRVQDWHHRHPDVRVYPITTHTGIARFL
MMAR_2076|M.marinum_M ---------PEELTDAADGEFERRVQQWGQHHTDVHVYPITTQAGIARFL
Mflv_4991|M.gilvum_PYR-GCK ----------DSRTAASAEVLEQRIRPWHERYPQVHVYPIANRADVAHFL
Mvan_1387|M.vanbaalenii_PYR-1 ----------DGRTEDSADALERHLRSWRERYPDVHIYPIAGSADVTHFL
MSMEG_3939|M.smegmatis_MC2_155 ----------DRR---EGDAFIYQVKSIQLRNPDLHIYPITDRNDVAGFL
MAB_3904|M.abscessus_ATCC_1997 LSGQRVATLTRVDRRVAAVHVERRLAPLRVRYPDLDIRALDPVGGTLDYL
MAV_4010|M.avium_104 ------------GNPSARVELERRLARWMRLYPDVQAESAVLTGGVEQHL
MUL_2424|M.ulcerans_Agy99 HG-------SEDGNRLATAQLTRRLTRWTRLYPDVRVESAIIAGHACRYM
TH_4471|M.thermoresistible__bu LFHYPG-LDTESLQTQAEAVLAERLAGWQERYPDVTVRRVVVAEHPARAL
. :: .:: :
Mb2657c|M.bovis_AF2122/97 ADHDERVQLAVIGG-GEAGQLARLVGPSGH---PVFRHAECSVLVVRR--
Rv2624c|M.tuberculosis_H37Rv ADHDERVQLAVIGG-GEAGQLARLVGPSGH---PVFRHAECSVLVVRR--
MMAR_2076|M.marinum_M ADHDERVQLAVIGA-DEADQVARLVGPSGH---PIFRHAECSVLVVRG--
Mflv_4991|M.gilvum_PYR-GCK RKHDEPVLLAVLGD-DEADEVAQIVG-HGR---SALRHGASSALVVRS--
Mvan_1387|M.vanbaalenii_PYR-1 KKHDEPVMLTVIGS-DEAGEVAKIIG-HGH---SLLRRGTSSALVVRS--
MSMEG_3939|M.smegmatis_MC2_155 RRHDEPVQLAVIGE-SEVAELPRILGPHGRHMFHLFEGTTSSVLVARYD-
MAB_3904|M.abscessus_ATCC_1997 ERHGHTVQLVVVGA-GDAAHVQELVGPNGCG---VLGRTHCSVLIAERQR
MAV_4010|M.avium_104 RADHRAGRLLVTDA-YRAEA---------------LCHAGHSVLAVRCGN
MUL_2424|M.ulcerans_Agy99 AANAKPDELYVTDS-HAAQVCS-------------VYGAGCSVLTVRSGN
TH_4471|M.thermoresistible__bu VQRAEEAQLVVVGSRGRSGLTGKLLGSVSTG---VVHSVRVPVMVARPR-
. * * . . ..: ..
Mb2657c|M.bovis_AF2122/97 --
Rv2624c|M.tuberculosis_H37Rv --
MMAR_2076|M.marinum_M --
Mflv_4991|M.gilvum_PYR-GCK --
Mvan_1387|M.vanbaalenii_PYR-1 --
MSMEG_3939|M.smegmatis_MC2_155 --
MAB_3904|M.abscessus_ATCC_1997 LL
MAV_4010|M.avium_104 L-
MUL_2424|M.ulcerans_Agy99 L-
TH_4471|M.thermoresistible__bu --