For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTITPVRQHTAPREQHVGRHWIHDWRPEDPEFWDTIGRPIARRNLVFSIFAEHIGFSVWMLWSIVVVQMM AVGAPGHPSHPAASGWALSPSQALCLVAVPSGVGALLRLPYTFAIPVFGGRNWTTISASLLVIPCLLLSW AVSHPGIPFVLLTLIAATAGVGGGNFASSMANISFFYPEKDKGWALGLNAAGGNIGVAVVQKIIPPIVVA GGGMALARAGLFYVPLAVVAAVCAFAFMNNLAEAKADVKPVWQSLRHADTWILALLYIGTFGSFIGYSAA FPTLLKTVFDRGDIALGWAFLGAGIGSVIRPLGGRLADRVGGARVTAVSFLMLAIGAAAALWSVQIVNLP LFFASFMFLFVATGIGNGSTYRMISRIFKVKGELAGGDPDTMVQMRRQAAGALGVISAVGAFGGFLVPLA YAWSKAQFGNIEPALRFYVVFFLALLFVTWHCYLRSKTPMAQLGV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_0526 | narU | - | 100% (465) | integral membrane nitrite extrusion protein NarU |
M. marinum M | MMAR_0521 | narK3_2 | 3e-74 | 36.56% (465) | integral membrane nitrite extrusion protein NarK3_2 |
M. marinum M | MMAR_3637 | narK1 | 4e-71 | 35.95% (484) | integral membrane nitrite extrusion protein NarK1 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0273 | narU | 0.0 | 83.01% (465) | putative integral membrane nitrite extrusion protein NARU |
M. gilvum PYR-GCK | Mflv_3015 | - | 2e-82 | 40.04% (472) | nitrite extrusion protein |
M. tuberculosis H37Rv | Rv0267 | narU | 0.0 | 83.01% (465) | integral membrane nitrite extrusion protein NarU |
M. leprae Br4923 | MLBr_00844 | narK | 1e-70 | 34.49% (461) | putative nitrite extrusion protein |
M. abscessus ATCC 19977 | MAB_3523c | - | 6e-90 | 40.48% (462) | integral membrane nitrite extrusion protein NarK3 |
M. avium 104 | MAV_4892 | narK | 0.0 | 84.05% (464) | nitrite transporter |
M. smegmatis MC2 155 | MSMEG_0433 | - | 3e-83 | 39.31% (463) | nitrite extrusion protein |
M. thermoresistible (build 8) | TH_0644 | narK2 | 2e-08 | 26.37% (201) | POSSIBLE NITRATE/NITRITE TRANSPORTER NARK2 |
M. ulcerans Agy99 | MUL_1189 | narU | 0.0 | 99.14% (465) | integral membrane nitrite extrusion protein NarU |
M. vanbaalenii PYR-1 | Mvan_3492 | - | 0.0 | 79.42% (452) | nitrite transporter |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3015|M.gilvum_PYR-GCK ------------------------------MTWAFTGVMAKRTRDIDTWD MAB_3523c|M.abscessus_ATCC_199 -----------------------------MANNTATAPIARRGRWIENWD MLBr_00844|M.leprae_Br4923 MDQLVLLQAEESLYGPGRRSKTVPIDHRHSLKSSFFRLRLRRACRISHWD MSMEG_0433|M.smegmatis_MC2_155 ------------------------------------MPTLLKPKRITNWD MMAR_0526|M.marinum_M --------------------MT----ITPVRQHTAPREQHVGRHWIHDWR MUL_1189|M.ulcerans_Agy99 --------------------MT----ITPVRQHTAPREQHVGRHWIHDWR Mb0273|M.bovis_AF2122/97 ------------------MALT----TAPAIDYALPRQQDEGDHWIDDWR Rv0267|M.tuberculosis_H37Rv ------------------MALT----TAPAIDYALPRQQDEGDHWIDDWR MAV_4892|M.avium_104 ------------------MTTT----ITPVPQPAAAPERHKGRHWIDDWR Mvan_3492|M.vanbaalenii_PYR-1 ------------------MTVTDSESTGALATAAPAPERHRGKHWIDDWR TH_0644|M.thermoresistible__bu -------------------------------------------------- Mflv_3015|M.gilvum_PYR-GCK PEDVQAWEGTGGKAPGKEIAKRNLIWSIVAEHVGFSVWSIWSVMVLFMPQ MAB_3523c|M.abscessus_ATCC_199 PEDVVAWD-NG----GAKIARRNLIWSVVAEHVGFSVWSIWSVMVLFMPQ MLBr_00844|M.leprae_Br4923 PEDQAAWEAGN-----KTIARLNLLWSVLTVHLGYSVWTLWPVMELFMPK MSMEG_0433|M.smegmatis_MC2_155 PEDVAAWEAGN-----KYVARRNLIWSVVAEHIGFSIWSIWSVMVLFMPE MMAR_0526|M.marinum_M PEDPEFWDTIG-----RPIARRNLVFSIFAEHIGFSVWMLWSIVVVQMMA MUL_1189|M.ulcerans_Agy99 PEDPEFWDTIG-----RPIARRNLVFSIFAEHIGFTVWMLWSIVVVQMMA Mb0273|M.bovis_AF2122/97 PEDPVFWETIG-----RPIARRNLIFSIFAEHVGFSVWMLWSIVVVQMTA Rv0267|M.tuberculosis_H37Rv PEDPVFWETIG-----RPIARRNLIFSIFAEHVGFSVWMLWSIVVVQMTA MAV_4892|M.avium_104 PEDPEFWETTG-----KAIARRNLIFSIFAEHVGFSVWMLWSIVVVHMTA Mvan_3492|M.vanbaalenii_PYR-1 PEDPEFWATTG-----KPVARRNLIFSIFAEHIGFSVWLLWSIVVVQMTA TH_0644|M.thermoresistible__bu --------------------MIGPLSTTYAVDISLS-------------- . : : : .:. : Mflv_3015|M.gilvum_PYR-GCK D------------VYGIDAAGKFYLVAVPTLVGAFMRIPYTIAPARFGGR MAB_3523c|M.abscessus_ATCC_199 N------------VYHIDAAGKFFLVAMPTLVGAVLRLPYTFATAWFGGR MLBr_00844|M.leprae_Br4923 D------------VYGFSAGDKFLLATTATLVGACLRVPYSLATALFGGR MSMEG_0433|M.smegmatis_MC2_155 A------------VYGFSAGDKFLLGATATLVGSCLRIPYTLATATFGGR MMAR_0526|M.marinum_M VGAPGHPSHPAASGWALSPSQALCLVAVPSGVGALLRLPYTFAIPVFGGR MUL_1189|M.ulcerans_Agy99 VGAPGHPSHPAASGWALSPSQALCLVAVPSGVGALLRLPYTFAIPVFGGR Mb0273|M.bovis_AF2122/97 A-APGHP---AASGWALSASQALCLVAVPSGVGAFLRLPYTFAIPIFGGR Rv0267|M.tuberculosis_H37Rv A-APGHP---AASGWALSASQALCLVAVPSGVGAFLRLPYTFAIPIFGGR MAV_4892|M.avium_104 G-PHGHP---SASGWALTASQALCLVAVPSGVGAFLRLPYTFAVPVFGGR Mvan_3492|M.vanbaalenii_PYR-1 G-ADGSP---AASGFALTTTQALWLVAVPSGVGAFLRLPYTFAVPVFGGR TH_0644|M.thermoresistible__bu ------------------SAEASMLVATPILVGAVGRIVVGSLTDRYGGR . * : . **: *: :*** Mflv_3015|M.gilvum_PYR-GCK NWTIVSALLLLIPTVLAYYYMKNPAS-YTTYMVIAAFAGLGGGNFASSMT MAB_3523c|M.abscessus_ATCC_199 NWTVFSALVLAVPTALTLYFMAHPETSYTTFMIVAAVAGFGGGNFASSMT MLBr_00844|M.leprae_Br4923 NWAIFSVMVLLIPTIATMVLLAHPGLPLWPYLACAALTGLGGGNFAASMT MSMEG_0433|M.smegmatis_MC2_155 NWTVFSALVLLIPTVMTVVLMANPGLPLWPYLVCAALAGFGGGNFASSMT MMAR_0526|M.marinum_M NWTTISASLLVIPCLLLSWAVSHPGIPFVLLTLIAATAGVGGGNFASSMA MUL_1189|M.ulcerans_Agy99 NWTTISASLLVIPCLLLSWAVSHPGIPFVLLTLIAATAGVGGGNFASSMA Mb0273|M.bovis_AF2122/97 NWTTVSAALLVIPCLLLAWAVSHPSLPFAVLVVIAATAGFGGGNFASSMA Rv0267|M.tuberculosis_H37Rv NWTTVSAALLVIPCLLLAWAVSHPSLPFAVLVVIAATAGFGGGNFASSMA MAV_4892|M.avium_104 NWTTISAALLLIPCLLLAWAVSHPGIPFGVLVAIAATAGFGGGNFASSMA Mvan_3492|M.vanbaalenii_PYR-1 NWTVISALLLLIPCLGLAWAVSNPDINFAVLLLIAATAGFGGGNFASSMA TH_0644|M.thermoresistible__bu --AMFIAITLASIVPVLAVGAAGAAGSYPLLLVFGFFLGIAGTIFAVGIP : . . * . . *..* ** .:. Mflv_3015|M.gilvum_PYR-GCK NINAFYPQRLKGWALGLNAGGGNIGVPVIQLIGLMVIAAVGNTRPEIVCA MAB_3523c|M.abscessus_ATCC_199 NINAFYPQRFKGWALGLNAGGGNIGVPVIQVIGLLVIATVGNRSPHWVAA MLBr_00844|M.leprae_Br4923 NANAFYPHRLKGAAFGLAGGAGNLGVSVIQVVGMLVIASVGDRKPYIVCG MSMEG_0433|M.smegmatis_MC2_155 NINAFYPQRLKGWALGLNAGGGNIGVPMIQLVGLFVIATAGNRAPYWVCA MMAR_0526|M.marinum_M NISFFYPEKDKGWALGLNAAGGNIGVAVVQKIIPPIVVAGGGMALARAGL MUL_1189|M.ulcerans_Agy99 NISFFYPEKDKGWALGLNAAGGNVGVAVVQKIIPPIVVAGGGMALARAGL Mb0273|M.bovis_AF2122/97 NISFFYPEKDKGWALGLNAAGGNIGVAVVQKIIPPIVVAGSGVALSRAGL Rv0267|M.tuberculosis_H37Rv NISFFYPEKDKGWALGLNAAGGNIGVAVVQKIIPPIVVAGSGVALSRAGL MAV_4892|M.avium_104 NISFFYPEKDKGWALGLNAAGGNIGVAVVQKVIPPVVIAGGGVALSRAGL Mvan_3492|M.vanbaalenii_PYR-1 NISFFYPESEKGWALGLNAAGGNIGVAVAQKIIPVVVTLGAGVALSLAGL TH_0644|M.thermoresistible__bu FANNWYAPSRRGFATGVFGMG-MVGTALSAFFTPRFVESFG---LFTTHV . :*. :* * *: . . :*..: . .: . . Mflv_3015|M.gilvum_PYR-GCK IYLVAISGAAVGAALFMDNLRNQKSNFGALVE----AMRFKHSWVMSFLY MAB_3523c|M.abscessus_ATCC_199 IYLVLIAFAAVGAALFMDNLADQKTDGRSLID----VMKYRDSWIIAFLY MLBr_00844|M.leprae_Br4923 LYVVLLIIAGIGAMLFMNDIEHHRIGVNTIRPVLFVVVSTRDSWVLALLY MSMEG_0433|M.smegmatis_MC2_155 VYLVALAVAGLGAALYMDNLEHHKIDLGAMK----AILGERDTWIISLLY MMAR_0526|M.marinum_M FYVPLAVVAAVCAFAFMNNLAEAKADVKPVWQS----LRHADTWILALLY MUL_1189|M.ulcerans_Agy99 FYVPLAVVAAVCAFAFMNNLAEAKADVKPVWQS----LRHVDTWILALLY Mb0273|M.bovis_AF2122/97 FFVPLAVAAAVCAFLFMNNLTEAKADVKPVWQS----LRHADTWIMSLLY Rv0267|M.tuberculosis_H37Rv FFVPLAVAAAVCAFLFMNNLTEAKADVKPVWQS----LRHADTWIMSLLY MAV_4892|M.avium_104 FYVPLAVVAAVCAFLFMNNLTEIKADVKPVWQS----LRHADTWIMSLLY Mvan_3492|M.vanbaalenii_PYR-1 FYIPFTVAAAVCAFLFMNNLTEAKADVKPVWES----LRHADTWIMSLLY TH_0644|M.thermoresistible__bu IIAVALGLTALLCLVAMHDSPDFTPNTERVLPKLKAAARLPVTWEMSILY . :.: . *.: . . : :* :::** Mflv_3015|M.gilvum_PYR-GCK IGTFGSFIGFSFAFGQVLQINYLAG--------GDTPAQASLHAAQIAFL MAB_3523c|M.abscessus_ATCC_199 IGTFGSFIGFSFAFGQVLQLNFLAGLAHSGVTPAQAAAQASLHAAQIAFI MLBr_00844|M.leprae_Br4923 LASFGSFIGFSFAFGQVLETNFVAG--------GQSTAQAALHAAELAFI MSMEG_0433|M.smegmatis_MC2_155 IGTFGSFIGFAFAFGQVLQINFISG--------GQTPAQASLHAAQIAFI MMAR_0526|M.marinum_M IGTFGSFIGYSAAFPTLLKTVFDRG----------------DIALGWAFL MUL_1189|M.ulcerans_Agy99 IGTFGSFIGYSAAFPTLLKTVFDRG----------------DIALGWAFL Mb0273|M.bovis_AF2122/97 IGTFGSFIGYSAAFPTLLKTVFGRG----------------DIALGWAFL Rv0267|M.tuberculosis_H37Rv IGTFGSFIGYSAAFPTLLKTVFGRG----------------DIALGWAFL MAV_4892|M.avium_104 IGTFGSFIGYSAAFPTLLKTVFGRG----------------DIALAWAFL Mvan_3492|M.vanbaalenii_PYR-1 IGTFGSFIGYSAAFPTLLKAVFDRG----------------DIALMWAFL TH_0644|M.thermoresistible__bu AIVFGGFVAFSNYLPTYXPSSPACT------------------------- **.*:.:: : Mflv_3015|M.gilvum_PYR-GCK GPLLGSISRPFGGKLADRVGGGRITLYVFVAMIFAAGVLVATGVMDDAAA MAB_3523c|M.abscessus_ATCC_199 GPLLGSLARPFGGWLSDRTGGGKISLYAFIAMIFGAGILVAAGTISDRGA MLBr_00844|M.leprae_Br4923 GPTLAAVARFWGGRLADRLGGSRVTLVVFGAMVFAAGLLGVLGIIEGSRV MSMEG_0433|M.smegmatis_MC2_155 GPLLGSLSRVYGGKLADRIGGGRVTLAVFAGMILGAGLLVAVSTVSDGSS MMAR_0526|M.marinum_M GAGIGSVIRPLGGRLADRVGGARVTAVSFLMLAIGA----------AAAL MUL_1189|M.ulcerans_Agy99 GAGIGSVIRPLGGRLADRVGGARVTAVSFLMLAIGA----------AAAL Mb0273|M.bovis_AF2122/97 GAGIGSLVRPLGGKLADRIGGARITAASFVMLAAGA----------AAAL Rv0267|M.tuberculosis_H37Rv GAGIGSLVRPLGGKLADRIGGARITAASFVMLAAGA----------AAAL MAV_4892|M.avium_104 GAAIGSVIRPLGGKLADRVGGARITAASFVMLAVGA----------AAAL Mvan_3492|M.vanbaalenii_PYR-1 GAGIGSVARPLGGKLSDRVGGARITAVSFAMLAIGA----------AGAL TH_0644|M.thermoresistible__bu ---ITTCTSTPPPRHSTRFGSG---------------------------- : : : * *.. Mflv_3015|M.gilvum_PYR-GCK GAPTSAQMIGYVAGFILLFILSGLGNGSTYKMIPSIFEAKAQGRDDLDKE MAB_3523c|M.abscessus_ATCC_199 GAPSGSIMTAYVIGFIILFVVSGIGNGSVYKMIPSVFAAKARSAG-LDET MLBr_00844|M.leprae_Br4923 CPIRGVMMASYFAGFITLFILSGLGNGSVYKMIPTIFEACSHSLGINDDE MSMEG_0433|M.smegmatis_MC2_155 EAATGLMMSGYVVGFIALFLLSGIGNGSVYKMIPSIFEARSHSLDVSEDE MMAR_0526|M.marinum_M WSVQIVNLPLFFASFMFLFVATGIGNGSTYRMISRIFKVKGELAG-GDPD MUL_1189|M.ulcerans_Agy99 WSVQNVNLPLFFASFMFLFVATGIGNGSTYRMISRIFKVKGELAG-GDPD Mb0273|M.bovis_AF2122/97 WSVQSVNLPVFFVSFMFLFVATGIGNGSSYRMISRIFQVKGEVAG-GDPE Rv0267|M.tuberculosis_H37Rv WSVQSVNLPVFFVSFMFLFVATGIGNGSSYRMISRIFQVKGEVAG-GDPE MAV_4892|M.avium_104 WSVKAVNLPAFFASFMFLFVATGIGNGSTYRMISRIFKIKGELAG-GDPD Mvan_3492|M.vanbaalenii_PYR-1 WSVQAKNMPVFFIAFMFLFVATGIGNGSTYRMISKIFRVKGEDAG-GDPL TH_0644|M.thermoresistible__bu --------------------PGRSGPAGSWPMCSPPRNPVTTAGS----- * .. : * . . Mflv_3015|M.gilvum_PYR-GCK GKAAWSRAMSGALIGFAGAVGALGGVFINVVLRASYVGDAKSATAAFWVF MAB_3523c|M.abscessus_ATCC_199 ----WSRTMSGALIGVAGAIGALGGVAINLVLRASYLSAAKSATMAFWVF MLBr_00844|M.leprae_Br4923 CR-DWSRVISGVVIGFVAEVGALGGVGIDLALRESYLNTG-GVTAAFWIF MSMEG_0433|M.smegmatis_MC2_155 RR-HWSRSMSGALIGFAGAVGALGGVGINMALRQSYLSSG-SATTAFWTF MMAR_0526|M.marinum_M TMVQMRRQAAG-ALGVISAVGAFGGFLVPLAYAWSKAQFG-NIEPALRFY MUL_1189|M.ulcerans_Agy99 TMVQMRRQAAG-ALGVISAVGAFGGFLVPLAYAWSKAQFG-NIEPALRFY Mb0273|M.bovis_AF2122/97 TMVNMRRQAAG-ALGIISSIGAFGGFVVPLAYAWSKVHFG-NIEPALHFY Rv0267|M.tuberculosis_H37Rv TMVNMRRQAAG-ALGIISSIGAFGGFVVPLAYAWSKVHFG-NIEPALHFY MAV_4892|M.avium_104 TMVTMRRQAAG-ALGVISAVGAFGGFIVPLAYAWSKSQFG-SIEPALRFY Mvan_3492|M.vanbaalenii_PYR-1 TMLHMRRQAAG-ALGIISSVGAFGGFIVPLAYAWSKSQFG-NIQPALQFY TH_0644|M.thermoresistible__bu GRSAITRRSRGHWIGVRSTR------------SHPMCRCGCSTAAACCGR * * :*. . . . . * Mflv_3015|M.gilvum_PYR-GCK LAFYVVCAFVTWFVFLRLQEHRAHSGEHIGRTSAPVPVG----- MAB_3523c|M.abscessus_ATCC_199 LVFYVICAAVTWYAYVRRPMTVSVP--AISSSKNEVAV------ MLBr_00844|M.leprae_Br4923 MLCYAAAGVLTWKMYVCRPLPGNLHDEAANAFAASVGASRTHRG MSMEG_0433|M.smegmatis_MC2_155 LAFYVLASVVTWFCYVRR--PAAMPVTGTERHAPAIAG------ MMAR_0526|M.marinum_M VVFFLALLFVTWHCYLRSKTPMAQLGV----------------- MUL_1189|M.ulcerans_Agy99 VVFFLALLFVTWHCYLRSKTPMAQLGV----------------- Mb0273|M.bovis_AF2122/97 VAFFLALLVVTWYCYLRRTTPMGQVGV----------------- Rv0267|M.tuberculosis_H37Rv VAFFLALLVVTWYCYLRRTTPMGQVGV----------------- MAV_4892|M.avium_104 VVFFLGLLAVTWYCYLRKHNAITRVGI----------------- Mvan_3492|M.vanbaalenii_PYR-1 VGFFIVLLGVTWFFYMRKGTRMAQAGV----------------- TH_0644|M.thermoresistible__bu --------------------------------------------